Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00618 TTAACGATGTGGGCACCGCAGTACCCTATTCTAACTCCACCACTGTCGCTGTTGGTTGGGAGCTGTCTGTCAATGAGTTGCTGATGAATTATCTCTCTTTTTTCCCAGGCACTATAGTCTAATTGTAAATGCAGCGCTCTGTTTTTCCATGGGCAAGAAGGGAGGATCCTCGTGGTTGACGGCCGTCAAAAGGGCTTTTAGATCTCCTTCCAAAGATGAAGATCACAAGAAAACAGAGAAGCGGAGATGGGTTTTCAGGCGATCCACCAATCTGCACGACCCGCCCACCCACCAAACGCCCTCCAACCCATCTTCCGACGCGGCGCTTGCTGTGGCGGTGGCCACTGCCGAAGCTGCAATGGCCACCGCCCAAGCGGCTGTAGAGGTTGTTCGCCTCACCACCAAGCCTTCCAATCACGCCAGAGACCACTACGCTGCAATTCTAATTCAGACTGCTTTTAGAGGATACCTGGCGAGGAGGGCTCTGCGTGCGCTCAAGGGGTTGGTGAAGTTACAGGCTCTTGTGAGGGGTCACAATGTCAGGAAACAGGCTAAGATGACCCTCCGATGCATGCAAGCTCTGGTTCGAGTGCAGGCCCGTGTGCTTGATCAGCGGATGCGGCTCTCTCATGAAGGCACAAGAAATTCCACACTCAGCGACCCTAGTACCGCCCTTGGATCGCGGTACCTTCAATTCTTGTCTGATAGAAAAGAGTTTGCCATGAAGCGTGATCGAAATCTTTCCCAACAGATATGGCGGAGAGGTCGAAGTCCGTCCATGGGCAGCGGAGATGATCTGGAAGAAAGACCCAAGTGGTTGGATCAATGGAATTCAAGGAAACCATGGGAGTGCAGGGGAAGAGCTTCAACCGATCAAAGAGATCCGATCAAAACAGTCGAAATCGACACATTCCAGCCCTACGCTCGCACATCCTCCAACTTCCGAAGAATGGCTCAACATCAACAAAGAACAAACCCGCATTCTGGCAGTTCACCACTCCACCGGACGCAACAAAACGTACCCTCTTTCTACCACTCACCGGCCACACCCTCCCCGTCTAAAACTAGGCCTATGCTGCAAGTCCGGTCTGCAAGCCCTCGTTTCGTGAGAGAGGACACAAGCGAGAATACATCCCAAACACCGAGCTTAAGGTCAAACTACTACTACAGTGGGAATTTGGTCCAACAAGGGAGGAGTGGAGCGAGTAGCAGTTATGGTGGTGAAGGCAACAATTGTTTGCCCAATTACATGGCGGCCACGGAGTCTGCAAAGGCCCGATTAAGGTCGCAGAGCGCGCCGAGGCAAAGGGCGTCAACGCCAGAGAGGGAGAGGGAGAAGGGAGGAATTGGGTATGCGAAGAAACGGCTGTCATTCCCTGTTCCTGATCCAATTGGGCATGGAGTTTTGAGGAGTCCAAGTTTCAAGAGCGTGAGCGGGACGTACTTGGGGATGGAGCAGCAATCCAACTATTCTTCCTGCTGTACTGACAGCCTGGGCGGAGAGATTTCCCCCTCTTCAACTACTGATCTAAGAAGGTGGCTAAGGTGATATTCATTCGTTGATAAAAATTCATGAACGTTGCTGTGTTGCTGCCTCTGAAATTACAAGTTCCTTGTAATCAATCCCCCTAACCCCCCAAAACAGAGTTTCTCAGGAATAGGATGTAACATTATCAAACTAAAGACTGTGTTGTTGTCTCAATTTTGCCAAATTGGTCCATATATAATGCTTCGTGGGATTTGGAAATTGTTTAGTATTTTTAAGTGTAGCTAAAGCTAAAACAGATTCTTGTATTTGGTCTAACAGAAACGTGGTGTGTTTTTGTGTTTGTATTGTTACAATAATTATTCAGCTAATTGATATGACCATTCTTCCA 1877 49.33 MGKKGGSSWLTAVKRAFRSPSKDEDHKKTEKRRWVFRRSTNLHDPPTHQTPSNPSSDAALAVAVATAEAAMATAQAAVEVVRLTTKPSNHARDHYAAILIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRMRLSHEGTRNSTLSDPSTALGSRYLQFLSDRKEFAMKRDRNLSQQIWRRGRSPSMGSGDDLEERPKWLDQWNSRKPWECRGRASTDQRDPIKTVEIDTFQPYARTSSNFRRMAQHQQRTNPHSGSSPLHRTQQNVPSFYHSPATPSPSKTRPMLQVRSASPRFVREDTSENTSQTPSLRSNYYYSGNLVQQGRSGASSSYGGEGNNCLPNYMAATESAKARLRSQSAPRQRASTPEREREKGGIGYAKKRLSFPVPDPIGHGVLRSPSFKSVSGTYLGMEQQSNYSSCCTDSLGGEISPSSTTDLRRWLR 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11070067 11072147 + XM_039049496.1 Bhi01g00618 23391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00618 466 MobiDBLite consensus disorder prediction 267 311 - -
Bhi01g00618 466 MobiDBLite consensus disorder prediction 444 466 - -
Bhi01g00618 466 MobiDBLite consensus disorder prediction 267 338 - -
Bhi01g00618 466 MobiDBLite consensus disorder prediction 17 39 - -
Bhi01g00618 466 ProSiteProfiles IQ motif profile. 117 144 IPR000048 GO:0005515
Bhi01g00618 466 MobiDBLite consensus disorder prediction 1 56 - -
Bhi01g00618 466 MobiDBLite consensus disorder prediction 321 338 - -
Bhi01g00618 466 Pfam Protein of unknown function (DUF4005) 316 425 IPR025064 -
Bhi01g00618 466 Gene3D - 92 144 - -
Bhi01g00618 466 SMART iq_5 92 114 IPR000048 GO:0005515
Bhi01g00618 466 SMART iq_5 115 136 IPR000048 GO:0005515
Bhi01g00618 466 PANTHER PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 1 174 - -
Bhi01g00618 466 PANTHER PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 184 466 - -
Bhi01g00618 466 MobiDBLite consensus disorder prediction 42 56 - -
Bhi01g00618 466 ProSiteProfiles IQ motif profile. 93 121 IPR000048 GO:0005515
Bhi01g00618 466 MobiDBLite consensus disorder prediction 374 399 - -
Bhi01g00618 466 Pfam IQ calmodulin-binding motif 120 136 IPR000048 GO:0005515
Bhi01g00618 466 Pfam IQ calmodulin-binding motif 96 114 IPR000048 GO:0005515
Bhi01g00618 466 PANTHER IQ-DOMAIN 5-RELATED 1 174 - -
Bhi01g00618 466 PANTHER IQ-DOMAIN 5-RELATED 184 466 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00618 Bhi-Chr1:11070067 Bhi12g02232 Bhi-Chr12:71569888 6.21E-154 dispersed
Bhi12g00643 Bhi-Chr12:19629107 Bhi01g00618 Bhi-Chr1:11070067 3.14E-29 dispersed
Bhi01g00618 Bhi-Chr1:11070067 Bhi01g01353 Bhi-Chr1:27167088 3.09E-31 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00618 - - csv:101221270 830.861