Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00635 AAGGAGGGAAGGGAGAAGGGGATCTTTCTTTCTTTTTTTTTTTCTTTGGCTTTGGTTTGCTTTTGCTTTGCTTTCTTGTGCTCACTTTCGTTGCTATAATCATATTGTGAAAGACGAAAAATGGAAACTGGATCCCAGACCCTAACATCATCAGGGCGCGGCCAGGCTCCGAATAATACCAATTATCAACTTCAAGTGTCGTTCCATCTCTCAAATGATCCCCAGCACATCCACGAAATGGGATTCGTGCAGTTGGAAGAGGAGAGCCAGGTTTTGAGTTTCTTGGCACCCAATAACAACAACGCCACCATGCCACCTGCTGCACCCTTTACTACTACTACTACTACTTCTGCTCACTCCCACTCCCACATCGTCGCTCGACCTTCTTGGAGTAACCACCAGGTGGGAACAATGGATCCCAAGGGCGGGAACGAGGATAACTGCACGGGTAGTGCCGGCGAGGGCACCAATTCATGGTGGAGAAACACAAACGCAGATAAGAGTAAGGTGAAGGTCAGGAGAAAGCTGAGAGAACCGCGTTTCTGTTTCCAGACTAGAAGCGATGTAGATGTCCTCGACGACGGCTATAAATGGAGAAAATATGGCCAAAAGGTTGTCAAGAACAGCCTTCATCCTAGAAGCTACTATCGTTGCACACATAGCAACTGCCGAGTGAAGAAGAGGGTGGAGCGACTGTCGGAGGATTGCCGGATGGTCATAACGACCTACGAAGGCAGACACAACCACTCTCCTTGCGACGACTCCAATTCTTCAGAGCACGAACCCTTTACATCCTTCTGACTTCCCATTCCAATAATTATATAATTTTTTCTTCTTTTTAGTTCCTTTTTTATATCCTGCCTTCCTAATTTCCTTTCCCTTTTCCTTTGCTTGTATAATTATTATTATTATTTCTTTAACTTTCTAAGCAAAATAGATCTGTTCCTCTGTATTTATTTGTTTAGAGATAAGATGACGCACATGAGAATATGAGATGGATTCCACTCCACTCCAACTTCTACCTATCCTATTACTATTAACTATTATTATTCACTA 1056 43.66 METGSQTLTSSGRGQAPNNTNYQLQVSFHLSNDPQHIHEMGFVQLEEESQVLSFLAPNNNNATMPPAAPFTTTTTTSAHSHSHIVARPSWSNHQVGTMDPKGGNEDNCTGSAGEGTNSWWRNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 226
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11496507 11498872 - XM_039046696.1 Bhi01g00635 23408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00635 226 SUPERFAMILY WRKY DNA-binding domain 144 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi01g00635 226 SMART WRKY_cls 152 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi01g00635 226 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 29 222 IPR044810 GO:0003700
Bhi01g00635 226 Pfam WRKY DNA -binding domain 153 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi01g00635 226 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 29 222 - -
Bhi01g00635 226 ProSiteProfiles WRKY domain profile. 147 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi01g00635 226 Gene3D WRKY domain 139 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi01g00635 226 MobiDBLite consensus disorder prediction 207 226 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00635 Bhi-Chr1:11496507 Bhi10g02311 Bhi-Chr10:59729087 1.57E-46 dispersed
Bhi01g00635 Bhi-Chr1:11496507 Bhi06g00364 Bhi-Chr6:7936850 2.22E-19 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62 PF03106 WRKY 1.40E-24 CL0274 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00635 - - csv:101216931 351.673