Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00701 TTCTCTTTCTTTTTTCATCTTCTTTACCTTTAGTAATCATATAATTTTCCTGCATTATGATGTCTACTTATAGTGAGTTTGATTTCATTTTGTCACTGCTTATGGTTTTCTCCATAACTTTCATCATTTCCTTGTTCTTTCCCTGTTATGGGTTTCTTTCGTGCTTAATATTTGTTATTTGACAGTTCTTCAGGTGGAATGAGCCAGCATGAGAGCAAAGGCCTGGATTGACGAACAAATTTTTGGCCTCAAGAGTAAGTTCAGGAAGATGATAAATTGTATTCGTTCAGGGGATCAGTTAAGAGATGAAATGATTCATTCATCAGATTCTCTGGCAACTCGAGACTATTCAGCTAGTGGTTTTTCATCCCGAACGGGTGAGGTGGAACCAAAGGTGGATAATGGCAACATTGAAGAAGCTGAATCATCTCTTCGTGAGAGTGGCTATTTGAATTATGAGGAAGCACGTGCCTTACTTGGAAGGCTGGAGTATCAAAAGGGTAACATAGAAGCTGCTCTTCATGTTTTTGAAGGAATAGATATTGCTGCTGTAATTTCCAGGATAAAAGCTTCTATTTCAACAAGATATGAACAAAATAGGCGCCAATCACAAAGTGATGTTGTGCCTACTATGTCCATGCATGCCATTAGTTTACTTCTTGAAGCTATTTTTCTGAAAGCAAAATCATTGCAGGGTTTAGGAAGGTTTGTAGAGGCGGCGAAATCATGCAAACTAATTTTAGACACTGTTGAATCGGCATTACCAGAAGGCTTACCAGAAAACTTTGCTATTGATTGTAAATTGCAAGAGACACTAACGAAGGCTGTTTACTTACTTCCAGAATTGTGGAAATCTGCTGGTTCTCCAGATGAATCTATCTTGTCATATAGGCGTGCTCTTCTCTATCAATGGAATCTGGAAACGGAAACCAGAGCAAAAATAGAAAAAGAGTTTGCAATATTCCTTCTCTATAGTGGTTGTGATGCAAGTCCTCCAACTCTTCGTTCACAGATGGAAAGCTCGTTTGTGCCAAGAAATAATATGGAAGAGGCAATTCTTCTGTTAATGGATCTGATGAGAAAATATATACTTGGATTGATTGAATGGGACCCGTCAATACTAGAGCATCTCTCATTTGCATTGTCTATTTCAGGGGAATTTGGAGCTCTAGCAAATGAGGTTGAACAATTGCCTCCTGGAATTATAGGACGAAAAGAAAAATACTGCACCCTAGCACTTTGTTACTATGGGGAAGGTAAAAGCTTAGTTGCATTGAATCTTTTGAAGAACTTCTTGAGTAACATAGAGAACGTAGACTGCTTACTGGAATTGTTGCTGGCTTCAAAGCTCTGTGGAGAAAATTTGGTTTGTCTTGATGAGGGGGTCACATACACATTGAGAGTGCTTTCAGAGCTGCATGGTAAATGCATCCAGATGACTTCTGTTGCTAATTGCTTACTTGGTGTGTTATTGTCAGCTATGTCAAAATCAGTTGCTTCGGATTCTCAGAAAACATTGAAGCAGTCTGAAGCACTTAAGGCGCTACAAACTGGTGAGCAACTGATGAGACAAAGAGATCCATTCATTGTTTATCATATTTGTCTTGAGTATGCTGAACAGAGGAAGCTGGATATTGCTTTATACTATGCAAAACAGCTAGTGAAACTCGAGGCAGGCTCTAGTCTGAAGTCTTACATACTCTTGGCTAGAATATTGTCTGCCCAAAAACGGTTTGTGGATGCGGAGACTGTTCTCAATGCTGCTCTTGAGCAGACAGGGAAGTGGGAACAGGGGAAACTCTTACGAACTAAAGCTAAACTCCAGATTGCGCAGGGCCAGTTGAAGAACGGTATAGAAACATATAGTCATCTTCTTGCTATAATTCAAGTCCAGACCAAAAGTAGTGGAAAGATGCTTCCGAAGGATGTGAGAAAATCTGACAGAAGTCTGGAAGTAGATACGTGGCATGACTTGGCCAATATTTACACAAGCTTGTCTCAGTGGCGGGACGCGGAGATCTGTCTGTCAAAATTGGAGGCAATCAATCCGTATTCTGCTTCCAAATGGCATTCCACAGGTTTACTCTACGAGTCAAAGGGTCTTCCGCGAGATGCTCTGCAAGCATACAACAAAGCATTGGACATTGATCCCAGCCATGTTCCCAGCTTGATATCCACTGCCTGTCTTCTCCAACAGTTAGGCGGCAGTCAGTCATTTCCTGTAGTAAGAAGCTTGCTAACCGATGCCCTTCGACTAGATCGAGCAAATCCATCTGCGTGGTACAGTCTCGGGATGCTATATAAAGCTGACGTTGGGGCATCGGCACTGGAGGTTGCTGAATGCTTTGAAGCTGCAACTCTGCTTGAAGAGTCAGCACCAGTTGAACCTTTCAGATGATGAACACTTGCTTTCTCGACATAGAGAAGCAGTATCCTAACTCTAAGGTTTTACTCAAGATTTTCTTGCTTGCTGCATTTTATTTTTCAGGATTAGGGATGTATTAGATGATTGTCACAAAGTAGTGTGTAAATAAAAGAGCAGAAATGTGTAAACAAAGTTTTCTAGCCAACCTTTTTTTGTTTTTCTTCACTTTCTTTTATAGAGATATGAACATTAAAATTTAGTAGTTTGATCTGTAAAGCGGATTAGTGAAACATTATTCCCCAAGTTGGCCAGGTAAATAGAAGTTCAATTCAACTGTGGCACCAAA 2711 40.28 MRAKAWIDEQIFGLKSKFRKMINCIRSGDQLRDEMIHSSDSLATRDYSASGFSSRTGEVEPKVDNGNIEEAESSLRESGYLNYEEARALLGRLEYQKGNIEAALHVFEGIDIAAVISRIKASISTRYEQNRRQSQSDVVPTMSMHAISLLLEAIFLKAKSLQGLGRFVEAAKSCKLILDTVESALPEGLPENFAIDCKLQETLTKAVYLLPELWKSAGSPDESILSYRRALLYQWNLETETRAKIEKEFAIFLLYSGCDASPPTLRSQMESSFVPRNNMEEAILLLMDLMRKYILGLIEWDPSILEHLSFALSISGEFGALANEVEQLPPGIIGRKEKYCTLALCYYGEGKSLVALNLLKNFLSNIENVDCLLELLLASKLCGENLVCLDEGVTYTLRVLSELHGKCIQMTSVANCLLGVLLSAMSKSVASDSQKTLKQSEALKALQTGEQLMRQRDPFIVYHICLEYAEQRKLDIALYYAKQLVKLEAGSSLKSYILLARILSAQKRFVDAETVLNAALEQTGKWEQGKLLRTKAKLQIAQGQLKNGIETYSHLLAIIQVQTKSSGKMLPKDVRKSDRSLEVDTWHDLANIYTSLSQWRDAEICLSKLEAINPYSASKWHSTGLLYESKGLPRDALQAYNKALDIDPSHVPSLISTACLLQQLGGSQSFPVVRSLLTDALRLDRANPSAWYSLGMLYKADVGASALEVAECFEAATLLEESAPVEPFR 729
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 13040344 13045155 + XM_039029104.1 Bhi01g00701 23474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00701 729 PANTHER OS10G0471400 PROTEIN 13 729 - -
Bhi01g00701 729 Pfam Tetratricopeptide repeat 467 522 - -
Bhi01g00701 729 Gene3D Tetratricopeptide repeat domain 572 724 IPR011990 GO:0005515
Bhi01g00701 729 Pfam Tetratricopeptide repeat 624 650 IPR019734 GO:0005515
Bhi01g00701 729 SUPERFAMILY TPR-like 531 699 IPR011990 GO:0005515
Bhi01g00701 729 ProSiteProfiles Leucine-rich repeat profile. 352 373 IPR001611 GO:0005515
Bhi01g00701 729 Gene3D Tetratricopeptide repeat domain 430 570 IPR011990 GO:0005515
Bhi01g00701 729 PANTHER PROTEIN NPG1 13 729 IPR043376 -
Bhi01g00701 729 SMART tpr_5 529 562 IPR019734 GO:0005515
Bhi01g00701 729 SMART tpr_5 617 650 IPR019734 GO:0005515
Bhi01g00701 729 SMART tpr_5 151 184 IPR019734 GO:0005515
Bhi01g00701 729 SMART tpr_5 493 526 IPR019734 GO:0005515
Bhi01g00701 729 SMART tpr_5 583 616 IPR019734 GO:0005515
Bhi01g00701 729 SUPERFAMILY TPR-like 457 557 IPR011990 GO:0005515
Bhi01g00701 729 ProSiteProfiles TPR repeat profile. 617 650 IPR019734 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00699 Bhi-Chr1:13040344 Bhi01g00701 Bhi-Chr1:13040344 0 dispersed
Bhi01g00701 Bhi-Chr1:13040344 Bhi01g00703 Bhi-Chr1:13040366 0 dispersed
Bhi01g00700 Bhi-Chr1:13040344 Bhi01g00701 Bhi-Chr1:13040344 0 tandem
Bhi01g00701 Bhi-Chr1:13040344 Bhi01g00702 Bhi-Chr1:13040345 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00701 K21843 - csv:101206105 1320.84