Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00719 TGAATTTTGAAGATTTTTGGAGTTTGATTGAAAAATGTCCCTAGACCAGTTCAAGAAACAAGCATCTTCTTTCCTGCATGAGAGATTCAAAGTAGCCAGGCTCGTTTTCACTGATGTTACCCAGGCAGAATTAGGAAGCCACAAACAAAGATCCATGTAGCCCTGATGCTAAAACAATGACAATAATAGCTGAGGCATCCTTTGAGGTAGATGATTATTGGAGAATTGTTGATGTCCTTCACAACAGGCTGCATAGCATTGAGTGGAAGCAGTGGAAACAATCCTACAAATCATTGGTACTCCTTGAGTTCTTGTTAACCCATGGACCAGAAGAGTTAGCTGATGAATTCAAGAGTGATTCATATATCATCGAAGAACTCGGAACTTTTAAACACATAGATGAAAGGGGGTTCAATTGGGGTGAGATCATGCAGCAAAAGTCTCAAAAGATACTACAACTTCTGAAAGGAGGCCAGACTTTAAAAGAATCGCGTTTGAAAGCTCTGAAAATAACAAGAGAAATTCAGGGATTTGGAAGTAGTTCATCGCCATCTTCGTCATCATCAACATTGTCACCTAGCTTTTCACCCAGCTTTTCGTTCGCTACATCAAGAACTTCATCATTTGGTTCGTATTCTACTACTACGAGCCCCACGTGGAGTGATTTACACGAGGAAAATAAATTTGAAAAATCCAAATCCCCAGAAGATGCCATTGAAAGCCATAATTGGGAAGGAATGGGAACTGAGAACAACTCTCCTGTAAGCAACTTTAATATCAAGAGACAACACCTTTGGGATAGCCCCCTAATCGAAGAGGATGATTGTCTACTTGAACCTGAGGATGAGGAAGAGAAACCAGCAAGTTTTCTAAGTGGAGTGTGCTCAAAGCTTGCGTTACTGAGTCCTACCCATCCAGAGAGAGCAGGATTTAGAAAAGCTTCTAATAAATGGGAAGAATGAAGATAGGAGTAATACTACATTAAGACTTTGTTAGCAATATGTTTCTAACCAGGGTATCCTAGAGGATGGTACTTTTAGTAAAAGTTAAAAGCCAAATGAAGCAGGCTTAGCCATGATGCCAGGCTTGAAATCATACTTAGAGCTATGAATAGCAAACAATTTTGCATTTTTGTAGAA 1139 39.6 MTIIAEASFEVDDYWRIVDVLHNRLHSIEWKQWKQSYKSLVLLEFLLTHGPEELADEFKSDSYIIEELGTFKHIDERGFNWGEIMQQKSQKILQLLKGGQTLKESRLKALKITREIQGFGSSSSPSSSSSTLSPSFSPSFSFATSRTSSFGSYSTTTSPTWSDLHEENKFEKSKSPEDAIESHNWEGMGTENNSPVSNFNIKRQHLWDSPLIEEDDCLLEPEDEEEKPASFLSGVCSKLALLSPTHPERAGFRKASNKWEE 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 13362564 13364299 - XM_039024519.1 Bhi01g00719 23492

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00719 261 SUPERFAMILY ENTH/VHS domain 2 120 IPR008942 -
Bhi01g00719 261 SMART enth_2 1 106 IPR013809 -
Bhi01g00719 261 Gene3D - 1 122 IPR008942 -
Bhi01g00719 261 ProSiteProfiles ENTH domain profile. 1 106 IPR013809 -
Bhi01g00719 261 PANTHER ENTH/VHS FAMILY PROTEIN 1 257 - -
Bhi01g00719 261 PANTHER EPSIN/ENT-RELATED 1 257 - -
Bhi01g00719 261 MobiDBLite consensus disorder prediction 164 178 - -
Bhi01g00719 261 MobiDBLite consensus disorder prediction 144 163 - -
Bhi01g00719 261 CDD ENTH 1 97 - -
Bhi01g00719 261 Pfam ENTH domain 1 99 IPR013809 -
Bhi01g00719 261 MobiDBLite consensus disorder prediction 144 178 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00719 K12471 EPN; epsin - csv:101212041 365.54
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00719 Bhi-Chr1:13362564 Bhi08g00617 Bhi-Chr8:20300843 2.71E-44 dispersed
Bhi01g00718 Bhi-Chr1:13362564 Bhi01g00719 Bhi-Chr1:13362564 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g725 . . . . . . . . . . . Cma14g01819 . Car14g01630 . . Cpe03g01521 Bhi01g00719 . . . Hepe05g1664 . . . . . . . . . Cone14ag0155 . . . Lsi05g01740 . . Cme06g00481 . . . . . . . . . . Cmo14g01857 . . . . . . . . . . . . . Cla05g00437 Cam05g0476 Cec05g0485 Cco05g0485 Clacu05g0473 Cmu05g0451 Cre05g0513 . Csa03g01199 Chy06g00463 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012486 0 2 0 0 0 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 29
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi01g00719 Bhi_Chr01 FPKM 21.233419 24.97444 53.315868 56.236473 78.808731 77.505409 79.071167 107.19973 101.89003 102.772766