Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00754 CGTTATAACGTTTTCTTTTCTTACTGTCTCACTAGATTTCTAGGGTTTCTCTTAACTTATTCACAAGGAGCGGTCCTCTTCCGGCCATTGTCGCCCGCTCCTTCTTCCCCTTTCTACGAGTTATCCCTTTCTTTAACTTCAATTGTTGCTCTTCTTACGTTTCTTTTCCATGCTGTACGCTTCAATTTCTTCTGCCTTACGAAGATATCTTTTTTCCCGAAATCTTTGATACCTCTTCCAAAGGCTTAAAACCTTCAACCTCAGCTATTCTAGCCTGCGGATTAATACCAAAAGCCGCTGTTGCCCCCAATGCAGCTTCTTAACTCTGAAGAAACGGTCGCCGACTCCTCGGAAAGCGCCGTGGTGGAGTCAAGAAATTTGAAATCTTCTGAGTTGGTTTCGTTTGAAGATAACAATGGAAACGATGCCGATGATTCGGTTCTTGATGTATCGGGGAGAAACTTGGATTCTAATTTCTTGGAGGGTTCCAGCAGCTCAGTAAGGGGTCTGTACGTATTTCGGAATGCGTTCAATTTGATCCCGAAATCACTTGGTGACTTTAGAGAGTTGAGAATGCTTAAGTTCTTTGGAAACGAGATTAACTTGTTTCCGCCAGAGTTGAAGAACTTTGTGGGGTTAGAATGCTTGCAAGTGAAGTTATCATCACCGGGTTTTGGTGGTTTATCATTACACAAACTTAAGGGTCTGAAGGAGCTCGAGCTATCGAAGATTCCTCCTAAACCTTCATCGTTTCCAATTCTTAGCGAGATCGCTGGCCTTAAGTGCTTGACTAAGCTCTCTGTTTGTCACTTTTCTATTAGATTTCTTCCCCCTGAAATTGGCTGCCTGAATAGTTTGGAGTATCTGGATCTCTCATTTAATAAGATGAAGAGCCTTCCAGCAGAAATAGGCTATTTGGATTCCTTGATATTCTTGAAGGTTGCCAATAACAAATTGGTGGAACTGCCTCAAGCTTTGTCCTCCTTGCAGAAGTTGGAGAACTTGGACCTGTCAAGTAATAGGTTAACATCATTGGGGTCTCTTGAACTTGTATCTATGCATAGCCTTAGAAACTTGAATTTGCAGTACAACAAGTTTCTGAAAAGCTGTCAGATACCTTCCTGGATATGCTGTAATTTTGAAGGAAATTGTGGAGATGATACAGCCAATGAAGAATGGATTAGTTCTACAGTTGAAATGGATGTTTATGAAGCCACCATTCAAGACAATGGGAATAATTTTCCCCATAAAGGTACTCGTAACCTCTCATCAAATCTATTAATGGGACCTTCAACGAATAGTAGATCTTTTGCATCTAGAAGATCAGGTAAGCGATGGCGGAGACGACATTATTTACAGCAGAAAGCTCGCCAGGAACGTTTGAACAGCAGCAGGAAGTGGAAAGGAGTTGATCATCATGCTGAAGTGAAGATCCATGAAAATCATGAACTTGGGAGGCTTGATTCTGCCCCTATTTCTGAAACTACAGTTGAAGATTCCTCAGTTATTGATGAATTATTTGATAGTAAAGAAACATGTCGCGTGGGAGATGAAAGGGAAACTCGTATCAAGAACGATGAGAATGACAATTTTGATCCCAACAAGGAATTTTCTGTGGAGGATTGCTCAAGTATCTGCGATGCTGCTGCAGAAACAATGACAAGGGATGAAAATGAATGCTGTGAGCCTAGTGAGGCTTTGCCGCTGACAGGAAATGGAGCATGTGACCATGAAGGATCATCTTCACAAATATCAAAAGATAATGCTAAGTTGAAAAGATATTCTGAGAGGGAACTTGATAATCCTAAACCTTGCAAGTCAAGAAAGCCAGTTGAAGATAGCTCAAGTTTATCTTGCAAGTACAATAGTACCTCGTTTTGCAACTTTGAGGATTATTTGCCTGATGGATTTTATGATGCAGGGCGTGACCGCCCCTTCATGCCATTAAGGAATTATGAGCAAATTTTTCATCTTGATTCACGTGAAGTCATCATCGTTAACAGGGAACACGATGAAGTATTAGATTCTATTACAATATCTGCCAAGTCATTGATACTCCGTCTAAAGCAGATTAACCACCTAACCCAAGAAAGACATCACGTTCTTGATGATGTGTATATTGCACAATTACTTGCTTTATTTGTATCTGATCACTTCGGAGGCAGTGATAGAAGTGCAATGGTTGAGAAAACACGGAGAGCTGTTTCTGGTTCAATGTATCAAAAGCCTTTTGTCTGCACCTGCTCAACTGGAGATCGGGATAATCTTACTATGTCCACCAAATTGACGGTGGATAATTATGAGGATATTCTTTTTACTGATATCTGTGAGAAGTCTCTTCGTGCTATTAAAGCAAGTCGAAATTCCATCATAGTGCCTCTAGGAGCTCTGCAGTTTGGTGTGTGCAGACATAGAGCTTTGCTTCTGAAGTATTTGTGTGATCGCATGGAGCCTCCAGTACCTTGTGAGCTTGTGAGAGGTTACTTGGATTTCTTGCCTCATGCGTGGAATGTGATCTTAGTGAAAAGAGGTAATACTTCGGTTCGAATGGTTGTTGATGCATGTCGACCAAATGATATACGAGAAGAAGCAGATCCTGAATATTTTTGCAGGTATATACCTCTCAGTCGTGTCAGACTTCCTATTTCTTTTGGAACGGCGTCCAATCCGGGGATTTCCTTTCCGTCTCTTTCCAATTGTGATGAGATTGAGAAGGCACCTTCTAGTTCTGTAATAAAGTGCAAACTTGCGTCAATTGAGGCTGCAGCAAAGTTACGGACACGTGAAGTTTGTGAATCTTCATTTGAAGAGATTAGAAACTTTGAATTCAGTTGCTTAGGTGAAGTTAGAATTCTGGGTGCTTTGAAACACTCATGCATAGTACAGATGTATGGACATCAGATATCCTCTGAGTGGATTCCTTCTGAAAATGGAAAACCAAAGCGTCGCTTGCTTAGGTCTGCAATTTTCTTAGAGCATGTTAAAGGGGGATCTTTGAAGGGCTACATGGACAAGTTGTACAAAGCAGGGAAGAAACATATTCCAATGGATCTGGCATTGCATGTAGCTCGAGATGTAGCAAGTGCTTTGGTAGAGCTGCATTCAAAACACATCATTCATCGAGACATCAAAAGTGAAAATATTTTGATTGAATTTGATGAAAAATCTGATGGAGTTCCCATCGTTAAGCTTTGTGATTTTGATAGAGCAGTGCCCCTTCGATCTTTATTGCACACTTGTTGCATTGCTCATACTGGAATACCTCCCCCTGATGTTTGTGTTGGAACACCTCGATGGATGGCTCCAGAAGTTCTACGAGCAATGCATACACCAAACATTTATGGACTGGAAGTGGATATTTGGTCGTTTGGATGTTTGTTATTGGAACTGTTGACCTTGCAAATTCCGTTCATGGGGCTTACAGAATTGCAGATCTTCGATCATCTTCAGATGGGTAAACGACCAGAATTGACAAATGAGCTTGAGGAAGCATTGGGATCGATAAAGGAAAGCTCAATGCCTCGATCATCTGCTCAAGAATCAGATGGTCCAGAGAAAGACCAAGAGACAAAAGCCTTCTTGATTGACTTGTTTCGTAAGTGTACTCAGGAAAACCCGAATGACAGACCGACAGCTGAAGAACTCCACAGAAGTTTGGTCGAGCATACAGTCAAAAGTTAAATCTTAACAAGAACTAGCTGCATGAAATTAATACCCTCACCCACACCATAACCTTATCCCAAATTTTGAAGCCGTAGAATGATTGTATTAGCTTTCCTGAATCCTTTAATAGTTGGTGCCTTTTGCCCCCATAATCATCAGTTAGGCTCACATGTTAATTTAGGATACAGTGGGTAGTCAGGTAGAATATCTTCATCGTAATGTAATTAAAATCCACAATTTTTTAGGCAAATTTACCCCACGTTCAAATTAGGACCTCGCCCTATTAGACAGGAGAATCAATTGTGATGCAGTTATGTAGAGAAAAGTTAAGAGGTCATTTTAGAGAACGTGGGATCCTCATTAGTTGCTGTACCTCATCATTGGCTTCAACATAATCTTATTACAATTATTTTTCCAATGCTTGTCCTTGAAAAAGCAAGTTGCTTTGACATTTTAGCTTTA 4125 40.68 MQLLNSEETVADSSESAVVESRNLKSSELVSFEDNNGNDADDSVLDVSGRNLDSNFLEGSSSSVRGLYVFRNAFNLIPKSLGDFRELRMLKFFGNEINLFPPELKNFVGLECLQVKLSSPGFGGLSLHKLKGLKELELSKIPPKPSSFPILSEIAGLKCLTKLSVCHFSIRFLPPEIGCLNSLEYLDLSFNKMKSLPAEIGYLDSLIFLKVANNKLVELPQALSSLQKLENLDLSSNRLTSLGSLELVSMHSLRNLNLQYNKFLKSCQIPSWICCNFEGNCGDDTANEEWISSTVEMDVYEATIQDNGNNFPHKGTRNLSSNLLMGPSTNSRSFASRRSGKRWRRRHYLQQKARQERLNSSRKWKGVDHHAEVKIHENHELGRLDSAPISETTVEDSSVIDELFDSKETCRVGDERETRIKNDENDNFDPNKEFSVEDCSSICDAAAETMTRDENECCEPSEALPLTGNGACDHEGSSSQISKDNAKLKRYSERELDNPKPCKSRKPVEDSSSLSCKYNSTSFCNFEDYLPDGFYDAGRDRPFMPLRNYEQIFHLDSREVIIVNREHDEVLDSITISAKSLILRLKQINHLTQERHHVLDDVYIAQLLALFVSDHFGGSDRSAMVEKTRRAVSGSMYQKPFVCTCSTGDRDNLTMSTKLTVDNYEDILFTDICEKSLRAIKASRNSIIVPLGALQFGVCRHRALLLKYLCDRMEPPVPCELVRGYLDFLPHAWNVILVKRGNTSVRMVVDACRPNDIREEADPEYFCRYIPLSRVRLPISFGTASNPGISFPSLSNCDEIEKAPSSSVIKCKLASIEAAAKLRTREVCESSFEEIRNFEFSCLGEVRILGALKHSCIVQMYGHQISSEWIPSENGKPKRRLLRSAIFLEHVKGGSLKGYMDKLYKAGKKHIPMDLALHVARDVASALVELHSKHIIHRDIKSENILIEFDEKSDGVPIVKLCDFDRAVPLRSLLHTCCIAHTGIPPPDVCVGTPRWMAPEVLRAMHTPNIYGLEVDIWSFGCLLLELLTLQIPFMGLTELQIFDHLQMGKRPELTNELEEALGSIKESSMPRSSAQESDGPEKDQETKAFLIDLFRKCTQENPNDRPTAEELHRSLVEHTVKS 1123
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 14265180 14275716 - XM_039022082.1 Bhi01g00754 23527

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00754 1123 MobiDBLite consensus disorder prediction 1100 1123 - -
Bhi01g00754 1123 Gene3D Transferase(Phosphotransferase) domain 1 792 1123 - -
Bhi01g00754 1123 MobiDBLite consensus disorder prediction 320 344 - -
Bhi01g00754 1123 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 65 1120 - -
Bhi01g00754 1123 MobiDBLite consensus disorder prediction 1 22 - -
Bhi01g00754 1123 ProSiteProfiles Leucine-rich repeat profile. 182 203 IPR001611 GO:0005515
Bhi01g00754 1123 PRINTS Leucine-rich repeat signature 183 196 - -
Bhi01g00754 1123 PRINTS Leucine-rich repeat signature 226 239 - -
Bhi01g00754 1123 MobiDBLite consensus disorder prediction 494 513 - -
Bhi01g00754 1123 Gene3D Ribonuclease Inhibitor 7 301 IPR032675 -
Bhi01g00754 1123 SMART serkin_6 794 1117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi01g00754 1123 MobiDBLite consensus disorder prediction 1063 1084 - -
Bhi01g00754 1123 SMART LRR_bac_2 226 245 - -
Bhi01g00754 1123 SMART LRR_bac_2 203 222 - -
Bhi01g00754 1123 SMART LRR_bac_2 180 199 - -
Bhi01g00754 1123 SMART LRR_typ_2 180 201 IPR003591 -
Bhi01g00754 1123 SMART LRR_typ_2 250 276 IPR003591 -
Bhi01g00754 1123 SMART LRR_typ_2 226 249 IPR003591 -
Bhi01g00754 1123 SMART LRR_typ_2 203 225 IPR003591 -
Bhi01g00754 1123 PANTHER BNAC08G43810D PROTEIN 65 1120 - -
Bhi01g00754 1123 Pfam Ethylene-responsive protein kinase Le-CTR1 673 750 - -
Bhi01g00754 1123 ProSitePatterns Serine/Threonine protein kinases active-site signature. 935 947 IPR008271 GO:0004672|GO:0006468
Bhi01g00754 1123 SUPERFAMILY Protein kinase-like (PK-like) 785 1116 IPR011009 -
Bhi01g00754 1123 Pfam Protein kinase domain 833 1113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi01g00754 1123 SUPERFAMILY RNI-like 51 276 - -
Bhi01g00754 1123 ProSiteProfiles Protein kinase domain profile. 794 1116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi01g00754 1123 MobiDBLite consensus disorder prediction 320 336 - -
Bhi01g00754 1123 ProSiteProfiles Leucine-rich repeat profile. 228 249 IPR001611 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00754 - - - csv:101218031 2024.98
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00754 Bhi-Chr1:14265180 Bhi06g01180 Bhi-Chr6:33857776 4.75E-22 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g565 Blo01g00110 Blo12g00343 Bda03g00864 Bda08g00257 Bpe04g00813 . Bma04g00760 Bma05g01090 . . Cma06g01365 Cma14g01752 Car06g01180 Car14g01579 Sed12g0977 Cpe08g00290 . Bhi01g00754 Tan10g0783 Cmetu06g1325 . Hepe05g1592 . Lcy11g1588 . . . . . . . . . Cone7ag0282 Cone4ag0275 Lsi05g01644 . . Cme06g00569 . . . . Bpe05g00880 . . . . Cmo06g01376 . . . . . . . . . . . . . . Cla05g00503 Cam05g0554 Cec05g0566 Cco05g0564 Clacu05g0550 Cmu05g0522 Cre05g0591 . Csa03g01285 Chy06g00539 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008400 2 1 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 0 1 1 1 1 2 1 35
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87295 PF00069 Pkinase 2.30E-37 CL0016 Bhi PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi01g00754 Bhi_Chr01 FPKM 2.28043 1.696904 9.470472 8.831674 69.185814 76.266548 72.838791 7.458993 7.931187 7.027435