Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00821 TGAAGCTTAGAGACCTAGTTGTAATCTAATCCTAACAAAAAAAAAAAAAAAAAAATTGTAAAATTTGTTTTTCATAATAATATTTTTACACATAAAGTTGACAGACTATCTAATTTTATTTGGAAAGTAACAAGTAACTTACACAATAACTCATGATTTATTGTAGAATCATACTTGATGGCACCTAACTTGACTTCGTTGATGCACCTGACGTTGTCAACTAACTCACAAATTGGCACCTAGTAATTTCTTTTTTTTAAAAAAAAAATATTTCATCCTTGATAAGGGATGCATAGAGATGGATGCAACATGAGTACATCACAGATTACTCTATATTGCACCATACAATGATCCATTATTATGGATTTAAAATGTCAATATCAACTAAAGAAGACAATGTGTTTGACATTTTTTAATAGTAAATTAAATATGTGAAAGAAGAGTACTTGAAATTTACATATATTTTTTTAGTACAATAATTAAGAAAATGAGAGATCAAATCTCCAAATTTGGAAAAGAAAGTGCACGTAAATTATAGTTGAATTAATGTCATGTTTATCAATCTGCAATCAAACTTAGTATAATTGCAATGAGAATCAATTGATGGATTAATTGTAATGAGCCTCAATTGCAAGCGTACCTAGATACACATTTGCAAATGTAATCTAATTACGATTAAGACTTATTACTTTGTAGTGTCTTAATACCATGAGATTTTTTAATCATATTCATTCCCCTTCTTTAAATCCTTCCGTGTGGGGGCTTTAATCCCATTACTCCCACACCATATTTTCCTCTTCCAATAACATTTTCTCTTAGTGGATTTTTCTGAACTTGACTTCATTCCCAAGTCGTCGTATCAAATCCATTACAAAGCAGCTTCCAGATTAGACCATTCCAAACACAATTTTTTTTCGCTACTCTATTCTAGAATTTCCTCTAAAACTTCGATGGCTGCCATTAAAGTTTTACATCTTTCTCTCCCGTTGCTTCTTTGTTTTATTCACTGTTACGCCCAGACCGGCACAATTGAATTGGGTTCATCAATCCTTGCTGGGTCGCATAAAACTTGGGTATCATCCTCCGGCGAATTTGCTTTTGGGTTCCACCAAACTGTCGATGGCAAATATGTTGTTGGCATAGTATTCGACAAAATTCCTGAGAGAACTTTGGTTTGGTCCGCCAACAGAGACAACCCGGCACAGGCTGGTTCAAACATTAGTCCTCAGAGGCACCGGTGAATTTGTGCTGATTCATGAAAATGGTACTGAGGTTTCAATCTACAATGGGAAAGACACGAGCTCTGCTTTAGTGTCCGACAATGGCAACTTAATGCTGCGGAATTCCTCGTCCATTCCCATATGGCAGAGCTTCGATCATCCCACCGATACTCTATTGCCTGCACAGGTCCTTCGCATTGGCCATCAACTGTACTCGAGTGCCAACAGAACAAGAAATGACTATTCAACGGGCCGATTCATGTTGGATGTTGCTAAAGATGGTAATGTCCTATTGACTGCTTTTCGAAATGGTGATCCTGCTTATAACTATACTGGCACGTCTGGAGACACCACGGCCATTGTCTTCAACCAAACGACAGTTCTATTATATGTTGTTAATGCCACGGCAATTACATATCCTATGACGACCAAATTGCCAGTCCCAGTAAAAGACTATTACCACAGATCAATTCTCGATGATCAGGGCAACTTCCGACAGTTGTATCGGATTAAGAATGGGGGCAAAAACGAGTGGATTACGACATGGAAGTTGATTGAAAGGCCTTGTATGGTGAGTAACATTTGTGGGGTGTTTGGATTTTGTTCAAATGGCAATGAAACTGCGATTTGTGAGTGTTTGGAAGGGTATGTGCCGATCGATCCAAACATACCCTCTAAAGGGTGTTATCCAAATCCAAATATGGTCATGGACTTTTGTTCATTGAATAATGCAAATGAGAGCTTCAAAATTGTTAAGCTTGACGATTCTGATTTCCCATTTCTTTTGGACTCTGACGTGTCCATGGTTGGACCAACAGATGAGAGCAGGTGCGAGGAAGCTGTGAGGAAGGACTGTTTTTGCTCAGCAGCCGTTTATTTTGGAGGTAATTGCTACAAGAAGAGGATGCCGTTGTTAAACGCTAGAAAAAGCATTCCTGACACCAGTAATCTAGTGGCTTTCCTGAAAGTTCCCATAATCATTAATGGCAAAAGATCCCTTTCTAACGAGGCCCTGCTAGCAATATTTGTCGTGTGTTCAACATTCGCATTGTCTTTTGCAGTTGTGTCTGTCTATTATCAACCCTTTATTACAAAGGATTTCTTAAAAGGGAAGAAACCTGCAAAGCTGAAGCCATTGGAGGTGAATTTGAAGGCATTTTCATTCAATGAATTGAAAGAAGCAACAAATGGTTTCGATAACCTACTTGGCAGAGGATCTTTTGGTGCAGTTTATAAAGGAGTTTTGACTTTGAGAGATCAAGAAGTGGAGGTTGCTGTGAAGCAATTAGAGAAGAAGGTGGTTGAACAAGGAGAAAAGTTCTTAACAGAAGTCCAAGTAATTGGTTTGACTCATCATAGAAACTTACTTCAATTGTTGGGATTCTGCAACGAAGAAGAGCATCGGTTATTGGTTTATGAGCTCATGAAAAATGGTCCTTCGTCAAATTTCCTGTTTGGAGAGAAGGAAAATCAGAAGCCTAAATGGGAAAGCAGAGCAAAAATGGTATTGGAAATTGCAAATGGGTTGTTATATTTGCACGAAGAGTGTGAAACTCAGATCATCCACTGCGATATAAAGCCACAAAACATTCTTCTTGACGATAATTACCGAGCAAAAATCTCAGATTTTGGGTTAGCCAAGTTGATGAAGAAAAACCAAACACGGACAGCCACGGTGATAAAAGGAACAAGGGGATATATGGCGCCAGAATGGCTCAAGACAGCACCTGTTACAACAAAAGCCGACGTTTACAGCTTTGGAGTCATGTTGTTAGAGATCATATTTTGCAGAAGGCATTATGAAGAAGAAACACAAGGCAATGATGGAATAATACTGGTGGATTGGGTTGTAAGTAGTGTGAGAGCAGAAAGATTGAGAGACATAATAAGGCATGATTGTGAAGCAATGAATGACTATGAAAAGTTTAAGAGGATGACAATGGTGGGAGTGTGGTGCATCTCTTCAGATCCTGTATGTCGGCCATCCATGAAAGAAGTTGTACGGATGCTAGAAGGAAGCAGTGACGTGAGAATCCCTCCTTTGCTTGAACGAATGAGATATGCATATTTTGTGTGGTTGTTTATGTTTCATGTGTTTTTGTATAATTGACTAAGGTCATGTTTGAATTGGCTCTCTCTTTTTAAAGCCTTTTGAAAATTCATTTCAAATATGCCGTAAAGAGATCCCGAGTAATTTGTTTACTTTTGTATGTTTTGAAGCAATTGGTCTTTTAATGAATGCACTAGAAAAAGAAGGCTCTTGCTATCATTTAAAAAATTGATGTGTACAAAGATGTCAAGTTCTAATATAATGTGTGAGTGTAAGAGAGATTTATCCTTTGGGTTGGTGTTCTAGTTCACTTAAGTACCACAAAGACTAATGCTATTTTATGTAGAGACTGACATGGAACTAATGATTGAATTAAAGCTAATGAAAACTAAACCGAGTGAGAAAACCAATAAGAAATGTGTCTTTAGGGAATTGATTTCACCAATTAGATTTATGAATTAACTAATTTAATGCACAAAACAAACATGCAATAATTTCATAAGTCGAGAAATAAAAAAAACTGTATATCTCGACCACAATTAACTCTTCTACAAAATAA 3829 37.11 MLRNSSSIPIWQSFDHPTDTLLPAQVLRIGHQLYSSANRTRNDYSTGRFMLDVAKDGNVLLTAFRNGDPAYNYTGTSGDTTAIVFNQTTVLLYVVNATAITYPMTTKLPVPVKDYYHRSILDDQGNFRQLYRIKNGGKNEWITTWKLIERPCMVSNICGVFGFCSNGNETAICECLEGYVPIDPNIPSKGCYPNPNMVMDFCSLNNANESFKIVKLDDSDFPFLLDSDVSMVGPTDESRCEEAVRKDCFCSAAVYFGGNCYKKRMPLLNARKSIPDTSNLVAFLKVPIIINGKRSLSNEALLAIFVVCSTFALSFAVVSVYYQPFITKDFLKGKKPAKLKPLEVNLKAFSFNELKEATNGFDNLLGRGSFGAVYKGVLTLRDQEVEVAVKQLEKKVVEQGEKFLTEVQVIGLTHHRNLLQLLGFCNEEEHRLLVYELMKNGPSSNFLFGEKENQKPKWESRAKMVLEIANGLLYLHEECETQIIHCDIKPQNILLDDNYRAKISDFGLAKLMKKNQTRTATVIKGTRGYMAPEWLKTAPVTTKADVYSFGVMLLEIIFCRRHYEEETQGNDGIILVDWVVSSVRAERLRDIIRHDCEAMNDYEKFKRMTMVGVWCISSDPVCRPSMKEVVRMLEGSSDVRIPPLLERMRYAYFVWLFMFHVFLYN 665
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 15384245 15389434 + XM_039022127.1 Bhi01g00821 23594

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00821 665 PANTHER SERINE/THREONINE-PROTEIN KINASE 2 646 - -
Bhi01g00821 665 ProSitePatterns Protein kinases ATP-binding region signature. 365 390 IPR017441 GO:0005524
Bhi01g00821 665 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 2 646 - -
Bhi01g00821 665 Pfam Protein kinase domain 363 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi01g00821 665 ProSiteProfiles Protein kinase domain profile. 359 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi01g00821 665 Gene3D Transferase(Phosphotransferase) domain 1 438 641 - -
Bhi01g00821 665 SMART serkin_6 359 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi01g00821 665 Gene3D Phosphorylase Kinase; domain 1 334 437 - -
Bhi01g00821 665 Pfam S-locus glycoprotein domain 113 181 IPR000858 GO:0048544
Bhi01g00821 665 Gene3D - 9 107 IPR036426 -
Bhi01g00821 665 SUPERFAMILY Protein kinase-like (PK-like) 344 651 IPR011009 -
Bhi01g00821 665 SUPERFAMILY alpha-D-mannose-specific plant lectins 2 34 IPR036426 -
Bhi01g00821 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00821 - - - bhj:120070241 1340.87
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00821 Bhi-Chr1:15384245 Bhi01g00826 Bhi-Chr1:15595717 5.60E-171 dispersed
Bhi01g00821 Bhi-Chr1:15384245 Bhi01g00822 Bhi-Chr1:15390450 9.12E-43 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g481 . . . . . . . . . . . Cma14g01697 . Car14g01528 . . . Bhi01g00821 . . . . . Lcy11g1537 . . . . . . . . . . . Lsi05g01426 . . . . . . . . . . . . . Cmo14g01742 . . . . . . . . . . . . . Cla05g00552 . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001427 0 3 0 0 0 4 2 3 3 1 2 4 2 1 5 1 4 1 1 4 0 4 3 2 7 6 3 2 2 1 71
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87301 PF00069 Pkinase 3.90E-51 CL0016 Bhi PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi01g00821 Bhi_Chr01 FPKM 8.932048 9.832352 5.67828 4.464758 5.126329 5.993716 4.867221 7.640697 7.843866 9.161427