Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00857 TCCTTCTCTTAAAATACAATATAACACTCATCAAAATCATGGCTCATATTGCTGTGGAGAGAAATAGGAGAAGGCAAATGAATGAACATCTTAGGGTTTTGAGATCTTTGACCCCCTGTTTCTATATCAAAAGGGGAGATCAAGCCTCCATTATTGGGGGAGTCATAGAGTTCATCAAGGAGTTGCATCAAGTTTTGCAATCATTGGAGTCCAACAAACGGAGGAGGAAGAGTATAAGCCCTAGCCCTGGTACAAGCCCGAGGCCGCAGCTGGTGGCGGTTGCCGATAATGGCCCGATTGGATTTGAAAATGGAGTTGAGGTCGTCGGAGCATGTTGTAATTCATCGGTTGCGGATGTTGAAGCAAAGATTTCGGGTTCAAACGTCATTTTGAAGATCATTTCCCGACGAATTCCCGGGCAACTTTCGAAGATGATTAGTGTCTTGGAGAGGCTCTCCTTTGAGGTTCTTCATCTCAACATTAGTAGTATGGATGACACGGTTCTATACTCTTTTGTGGTGAAGATAGGGCTTGAATGTCAGCTAAGTTTGGAGGAACTAGCTTATGAAGTTCAACAAAGCTTCTGCTCTCAAGTTTATTTATGCCAGTGAAAAATATAATTAAATTAACCTTTGAAGGACTTAATTATATGCTTAATTATATAGACAGTTTTATTTCACATTAAGAATAGAAATAAGGGAGTTTACTCACATCAATGAAGGCTTTGTTTAATTTAATATCAGAAGATATATATATATATATATGCTGTTTTGTAATAGTGAGATCTTCATTACCCAATCAAAATCAAAATGATAGACAAATGTCAATTATGTCCACCTCCTAAATTTGGGACATTTCATCACCCTTATAACTTTAATTGAATTTCTATTTCACCA 896 37.61 MAHIAVERNRRRQMNEHLRVLRSLTPCFYIKRGDQASIIGGVIEFIKELHQVLQSLESNKRRRKSISPSPGTSPRPQLVAVADNGPIGFENGVEVVGACCNSSVADVEAKISGSNVILKIISRRIPGQLSKMISVLERLSFEVLHLNISSMDDTVLYSFVVKIGLECQLSLEELAYEVQQSFCSQVYLCQ 190
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 16161798 16163793 + XM_039050192.1 Bhi01g00857 23630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00857 190 PANTHER TRANSCRIPTION FACTOR FAMA 1 187 IPR044283 GO:0003700|GO:0010052
Bhi01g00857 190 SMART finulus 4 55 IPR011598 GO:0046983
Bhi01g00857 190 CDD bHLH_AtFAMA_like 1 64 - -
Bhi01g00857 190 PANTHER TRANSCRIPTION FACTOR MUTE 1 187 - -
Bhi01g00857 190 Pfam Helix-loop-helix DNA-binding domain 2 49 IPR011598 GO:0046983
Bhi01g00857 190 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 49 IPR011598 GO:0046983
Bhi01g00857 190 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 62 IPR036638 GO:0046983
Bhi01g00857 190 Gene3D - 1 66 IPR036638 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00241 Bhi-Chr1:4540204 Bhi01g00857 Bhi-Chr1:16161798 1.51E-55 dispersed
Bhi01g00857 Bhi-Chr1:16161798 Bhi04g00791 Bhi-Chr4:19588772 7.32E-39 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80 PF00010 HLH 1.00E-07 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00857 - - csv:101203445 335.109