Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi01g00857 | TCCTTCTCTTAAAATACAATATAACACTCATCAAAATCATGGCTCATATTGCTGTGGAGAGAAATAGGAGAAGGCAAATGAATGAACATCTTAGGGTTTTGAGATCTTTGACCCCCTGTTTCTATATCAAAAGGGGAGATCAAGCCTCCATTATTGGGGGAGTCATAGAGTTCATCAAGGAGTTGCATCAAGTTTTGCAATCATTGGAGTCCAACAAACGGAGGAGGAAGAGTATAAGCCCTAGCCCTGGTACAAGCCCGAGGCCGCAGCTGGTGGCGGTTGCCGATAATGGCCCGATTGGATTTGAAAATGGAGTTGAGGTCGTCGGAGCATGTTGTAATTCATCGGTTGCGGATGTTGAAGCAAAGATTTCGGGTTCAAACGTCATTTTGAAGATCATTTCCCGACGAATTCCCGGGCAACTTTCGAAGATGATTAGTGTCTTGGAGAGGCTCTCCTTTGAGGTTCTTCATCTCAACATTAGTAGTATGGATGACACGGTTCTATACTCTTTTGTGGTGAAGATAGGGCTTGAATGTCAGCTAAGTTTGGAGGAACTAGCTTATGAAGTTCAACAAAGCTTCTGCTCTCAAGTTTATTTATGCCAGTGAAAAATATAATTAAATTAACCTTTGAAGGACTTAATTATATGCTTAATTATATAGACAGTTTTATTTCACATTAAGAATAGAAATAAGGGAGTTTACTCACATCAATGAAGGCTTTGTTTAATTTAATATCAGAAGATATATATATATATATATGCTGTTTTGTAATAGTGAGATCTTCATTACCCAATCAAAATCAAAATGATAGACAAATGTCAATTATGTCCACCTCCTAAATTTGGGACATTTCATCACCCTTATAACTTTAATTGAATTTCTATTTCACCA | 896 | 37.61 | MAHIAVERNRRRQMNEHLRVLRSLTPCFYIKRGDQASIIGGVIEFIKELHQVLQSLESNKRRRKSISPSPGTSPRPQLVAVADNGPIGFENGVEVVGACCNSSVADVEAKISGSNVILKIISRRIPGQLSKMISVLERLSFEVLHLNISSMDDTVLYSFVVKIGLECQLSLEELAYEVQQSFCSQVYLCQ | 190 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 16161798 | 16163793 | + | XM_039050192.1 | Bhi01g00857 | 23630 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi01g00857 | 190 | PANTHER | TRANSCRIPTION FACTOR FAMA | 1 | 187 | IPR044283 | GO:0003700|GO:0010052 | |
Bhi01g00857 | 190 | SMART | finulus | 4 | 55 | IPR011598 | GO:0046983 | |
Bhi01g00857 | 190 | CDD | bHLH_AtFAMA_like | 1 | 64 | - | - | |
Bhi01g00857 | 190 | PANTHER | TRANSCRIPTION FACTOR MUTE | 1 | 187 | - | - | |
Bhi01g00857 | 190 | Pfam | Helix-loop-helix DNA-binding domain | 2 | 49 | IPR011598 | GO:0046983 | |
Bhi01g00857 | 190 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 1 | 49 | IPR011598 | GO:0046983 | |
Bhi01g00857 | 190 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 1 | 62 | IPR036638 | GO:0046983 | |
Bhi01g00857 | 190 | Gene3D | - | 1 | 66 | IPR036638 | GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi01g00241 | Bhi-Chr1:4540204 | Bhi01g00857 | Bhi-Chr1:16161798 | 1.51E-55 | dispersed | |
Bhi01g00857 | Bhi-Chr1:16161798 | Bhi04g00791 | Bhi-Chr4:19588772 | 7.32E-39 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80 | PF00010 | HLH | 1.00E-07 | No_clan | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi01g00857 | - | - | csv:101203445 | 335.109 |