Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00858 AAATGCAAGTGAAGAGTGGGATGAATAAAAAAAAATAGAAAAAAGAAAAGCGGGGGTGTGTTCGAAAATAAAGAGTACTCTGCCTCTTCGTTTTGGTGCAGCCAGCAGCGTTTTTCACTTTCTCCTCTGCCCCCATTTGCTTCGCTTCGCTTTGTTTTAACATTATTTTTTCTTCTCTTTCTTCTTTCTTTCACCCTGAAAAAGAGGAACGAGTTAACACACAAACCCTTTTAACACACCTATCCCATCTCTCTGCTTCTCAACTTTGGTCTTCGTTTCTTCCCTTTCTTTCTCTGTACTCAGATTCCTACTTTCTCTGGATTTGCTTCGTTGAGTTCCAAGAGAATTACTAACCCAAAAATACAACTAATACCCATTACTCTCTCCTCTCTTTCATTTCCCAGATCTATTCTCCTCTCCTCTCTTTTTTCTTTTCTTTTCTTTTTTTTTCCCCCTTTTCTTTCCTCTCTTTGTCTCTCTCTCTCTCTCTCTCACACGCACACTGTTTGTTTGACTTGAAGCTATGAGTAAAGAAGAGTTTTTGAAGATCCAGAAATGTGTTTTGAAGGTGAACATTCACTGTGATGGATGTAAGCACAAGGTGAAGAAAATCTTGCAGAAAATCGATGGGGTTTTCACTACCGAGATAGATGCAGAACAGGGAAAGGTCACAGTGACCGGAAATGTAGATGCAGCCGTACTCATCAAGAAGCTGGCAAAATCCGGCAAACATGCAGAGATTTGGGGCGGCCAACCGGCTAACAACAAAAATCAGCAAAACAACATAGCTAATCAGATGAAGAACACGCAAATTGATAATGCGAAAGGTGGGAACAACAAGGGCCAGAACCAGAAGGGCGGCGCTGCTGGCGGTGGCGGCAATGGAAATAACCTGCCTAAAGGTGGACAAGGGCAAGGGTTGCAACCGTCGCAGCTTCAGCAGCTACAAGCGATCAAAGGGTTTCAAGATCTGAAGCTCCCACCCCAATTTAAGGGCTTGAAATTACCCGTTAAAGATCAGAACCCGAATCTTCCCAAAGGCGGGAAGTTCAATTTGGACGAGGGTGATGATCTGAGCGATGAGGATGATCTTGATGACTATGATGATGAGGATTATTATGACGATGACGATGAGTTTGATGATGATTTAGGTAATCTTCACCTTCCTCCGGCGAATAAGATGATGAAACCCATAATGGGAAATGCCCAGATGCCGAAAACGACGATGAATGGGAATCATCCACCGGTGATGAATGGTCCAGCCGCCGGAGGAAATGGCGGAGGTAACGGTAAAAAAGGCGGTGGAGCTGTGCCGGTTCAGGGGAATAACAATGCGAAGAATGGAAATGGCGGAGGTAAAGGGACTGGCGGTGGAGGTGGAGGTGGGAGCAATCAAAAACAGGGCAGCGGCGGAGGTGGAGGAAAAAATAACGGTGGTGGCGGTGCTGCTGGCGGTGGTGGGGGCAATAATAAAACTGGTCACGGCGGTGGGAATGGTAGCAATAATGGAATGAACGGCGGTCAAAAGGCAGCCGGTGGGTCAAATGGAATGGGCCATGATTTACAGAGCTTGGTCGGCGCTCATGGATTGGGAATGCCCAATTTGAGTCAAATGGGTCAAATGGGTGACCGGCCGATGGGCCAAATGGGTAATATTCCGGCGGTACAAGGTCTTCCCGCCGCGGCCCCAGCGCCAACCATGAACGGCAACGGTGGCGGTGGTGGAGCCGGTAGGTTTTTGCCGGAGGGAATGGCGGGGAACCCTTACCAACAGCACCCACAGCAGTACATGGCGCAAATGATGAACCAACAACAACACCACGCGCTCGGGCACCAACCGATGATGTACGCGCGGCCATCGCCAGCCGTAAATTACGTGCCGCCGCCGTACCCATACCCATATCCACCACCGTACCACAACCCATATCCCCCAACGCAGCCAGAACCCTACACATATTTTAGCGACGAGAACCCCTCAAGTTGTAACATCATGTGAAACCACCATACCGTCGGCGACGGCGGTTGTGCCGCCGGAATTTCGGATCGGAATCTGCATTATACTCTTCTTCTACTAAGCTACTTGGGAATGGTTCTCTCTTATAAATTTTAGCCTTTCTCTATATCATATTTCACCCTCTTGATTTTGCTTGTTTTTTCTCTCTTTTTTTTTTTGGAATTTGAAGCTGGATTAGAGTCTTTAATCATATCCTCAAGACAAAAAAAAAAAAAGTAATTATAGATAATTAAATTAAGAAGTTGGAATGGAAGAAGGAAGTATGGAAAAATGGTAGTGAGCTTTGCCCTTTTTTTTCGTCTTTTTTCTTTTCTTGAGACGCCATGTTTATAAGTGTTTATATGTTATATAAACAACAATAAATGAAAATTTGAGATGGGGATTGTAAATTCCCATTTCTTTGCTTTGTC 2424 45.54 MSKEEFLKIQKCVLKVNIHCDGCKHKVKKILQKIDGVFTTEIDAEQGKVTVTGNVDAAVLIKKLAKSGKHAEIWGGQPANNKNQQNNIANQMKNTQIDNAKGGNNKGQNQKGGAAGGGGNGNNLPKGGQGQGLQPSQLQQLQAIKGFQDLKLPPQFKGLKLPVKDQNPNLPKGGKFNLDEGDDLSDEDDLDDYDDEDYYDDDDEFDDDLGNLHLPPANKMMKPIMGNAQMPKTTMNGNHPPVMNGPAAGGNGGGNGKKGGGAVPVQGNNNAKNGNGGGKGTGGGGGGGSNQKQGSGGGGGKNNGGGGAAGGGGGNNKTGHGGGNGSNNGMNGGQKAAGGSNGMGHDLQSLVGAHGLGMPNLSQMGQMGDRPMGQMGNIPAVQGLPAAAPAPTMNGNGGGGGAGRFLPEGMAGNPYQQHPQQYMAQMMNQQQHHALGHQPMMYARPSPAVNYVPPPYPYPYPPPYHNPYPPTQPEPYTYFSDENPSSCNIM 490
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 16248569 16251284 - XM_039046123.1 Bhi01g00858 23631

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00858 490 MobiDBLite consensus disorder prediction 97 111 - -
Bhi01g00858 490 MobiDBLite consensus disorder prediction 97 136 - -
Bhi01g00858 490 MobiDBLite consensus disorder prediction 158 205 - -
Bhi01g00858 490 MobiDBLite consensus disorder prediction 227 416 - -
Bhi01g00858 490 Pfam Heavy-metal-associated domain 14 70 IPR006121 GO:0046872
Bhi01g00858 490 Gene3D - 9 81 - -
Bhi01g00858 490 ProSiteProfiles Heavy-metal-associated domain profile. 17 73 IPR006121 GO:0046872
Bhi01g00858 490 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 1 490 - -
Bhi01g00858 490 SUPERFAMILY HMA, heavy metal-associated domain 10 75 IPR036163 GO:0046872
Bhi01g00858 490 MobiDBLite consensus disorder prediction 319 335 - -
Bhi01g00858 490 MobiDBLite consensus disorder prediction 181 205 - -
Bhi01g00858 490 PANTHER HEAVY METAL TRANSPORT/DETOXIFICATION DOMAIN PROTEIN 1 490 - -
Bhi01g00858 490 CDD HMA 13 72 IPR006121 GO:0046872
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00858 - - - fve:101291515 254.218
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bhi01g00858 Bhi12g01804 CCT
Bhi01g00858 Bhi12g01804 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00858 Bhi-Chr1:16248569 Bhi11g00444 Bhi-Chr11:10699943 2.08E-13 dispersed
Bhi01g01001 Bhi-Chr1:18270707 Bhi01g00858 Bhi-Chr1:16248569 2.07E-25 transposed
Bhi01g01797 Bhi-Chr1:38320738 Bhi01g00858 Bhi-Chr1:16248569 4.48E-25 transposed
Bhi02g02025 Bhi-Chr2:55036479 Bhi01g00858 Bhi-Chr1:16248569 6.68E-39 transposed
Bhi02g02106 Bhi-Chr2:57183415 Bhi01g00858 Bhi-Chr1:16248569 7.80E-19 transposed
Bhi04g02280 Bhi-Chr4:62318558 Bhi01g00858 Bhi-Chr1:16248569 1.01E-09 transposed
Bhi06g01437 Bhi-Chr6:43852842 Bhi01g00858 Bhi-Chr1:16248569 9.39E-20 transposed
Bhi07g00717 Bhi-Chr7:26906855 Bhi01g00858 Bhi-Chr1:16248569 9.09E-11 transposed
Bhi12g00885 Bhi-Chr12:26682516 Bhi01g00858 Bhi-Chr1:16248569 1.34E-25 transposed
Bhi01g00858 Bhi-Chr1:16248569 Bhi12g01804 Bhi-Chr12:57725847 7.54E-49 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g432 . . . Bda08g00392 . Bpe14g01320 . Bma05g00945 Cmo08g01141 Cmo17g00256 Cma06g01433 Cma14g01677 Car06g01235 Car14g01511 Sed02g1273 . . Bhi01g00858 Tan10g0886 Cmetu11g1818 Lac12g2329 Hepe05g1523 . Lcy11g1507 Cla06g00546 Cam06g0589 Cec06g0586 Cco06g0594 Clacu06g0576 Cmu06g0570 Cre06g1336 Cone14ag0822 . Cone7ag0216 Cone4ag0208 Lsi05g01455 . Chy11g01430 Cme06g00645 . . Bda11g00561 . . Bpe13g00622 . Bma06g01540 . Cmo06g01436 Cmo14g01722 Cma08g01168 Cma17g00269 Car08g01046 Car17g00244 . . Bhi12g01804 . . . . . . Cla05g00578 Cam05g0634 Cec05g0644 Cco05g0639 Clacu05g0630 Cmu05g0598 Cre05g0666 Lsi09g01356 Csa03g01371 Chy06g00615 Cme11g01935
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000577 6 3 3 5 3 3 6 3 3 3 3 2 6 3 3 6 2 4 1 3 4 3 3 3 3 3 4 5 3 3 105
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi01g00858 Bhi_Chr01 FPKM 2.66057 3.457183 11.774793 12.564857 28.490736 23.884335 28.735901 6.622972 8.147584 7.238756