Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00859 AGGTCAACGGACGGACGAAGTCTGTTCTTCAACTTCACACAAACTGCTTCTCCCAATTTTTCAGCAAAAAGATCCCAAATCTTCATTTCTTCCGCTCCGATCTCTCAGTCTTCAAATGGGTATTTCATGGAGTAACAGAAGAAGAAATAATTATCTTCAAAACCCACCTCCGCCTCCTCCTCCGCCCTACCTTGCTTCTTCCTCTTTTTATTACCCCTCCGAACCCCAATCTCTTTCTCCTACTCCGCCTCCGCCTCCGCCGCCGCCGCCGCCGCAGACCCATCAGTTCACCAATTCCCACCCTCCTCCGCCGCACAGCCACCCTTACGGTCCAACTTCTCAGCCACTACCCCTGCCGCCGATTCCTCATCCCCCTGCCCCTGCCCCTGCTCCTGCTCCTCACTCCTATTACTTCTCCGGTGTGTACAATTCGTGTAATTATGGGAATTCTTCGATGGGGCGTTTCAATTTTCACCCTTATTATACTAATCAGAGTAACGGGTGGTCCCAAATTCGGCCGGCCATGGGTCCGCCGTTGCTTCCCCCACCGCCTTTGCCGTTTGTGGAGCATAGGCAAGCGAAGAAGGTTAGAAATGATGTGAATGTACATAAGGATACCTTAAGGATTGAAGTGGACGAGCAGAACCCTGATCATCATTTGGTTTCTTTCGTTTTCGATGCATTGTATGATGGAAGCATAACCATTCTATTTTTTGCCAAGGAAGAGCCTAATTGTAGGTTTGTTCCAGTATATCCTGATGCCTTTAAGCCAGTAAAAATCCCATTTCAGAAGGGTCCTGCTCAGAAATTCTTTCAGCCTGTGGGAACTGGCTTTGACTTGGGATTTTTTGAGTTGGACGACCTCTCAAAACCTTCATCTGCAGAAGATATTTTCCCACTTGTTATATCTGCTGAGACTTGTTCACCCTCTCAATGCGATGATGAACGAATTGGTGAACCTCAAGGAGATAATTCACATATGCAAATCACTCAAGCTGTTTTGGAGAAGAAAAATGGTGGTCCTTTCCAGGTTAGAGTGATTAGGCAACTACTATGGATCGATGGAGTGAGATATGAGTTGCGTGAAATATTTGGAATAGGGAGTTCATCAGCAGAAGGTTTTGACGATAATGACACCGGGAAGGAATGTGTGATTTGCATGACTGAACCCAAGGACACTGCTGTATTACCATGCCGACATTTGTGCATGTGCAGTGACTGTGCCAAGGAACTGAGGCTTCAATCTAATAAGTGTCCTATTTGCCGTCAGCCGATCGAAGAACTTATAGAAATCAAGATAAATAATAGCGACCAGTGAGAATTGCCTCGTCATCCTATGTTGGATTGCCTGGTATGGCTGTTAAATTCTTTGGTTTTGATGTGTCATAATCCCACATACTGCATTCTTTACACACACACACATATGTATGTATATTTTCTTTTTCTTCATATACATAGAACTAGTGTAGTATTTACAACTTGATATTTTCATGTCATGTCTAACTATCGAATAATGTCATACCAGTCGTCTCCGAGCTGACTTTCTACTGTAATGTATGATTTGGACACTAACATTCATGGTTTTTATGTGCGGCGCATTAATGTGCATGCGAGAGACCGTGCACATGTGTATTATCTGTATGAAGATTGAATACAAGAATTGGGTTCGAGTTCGTATATGACCTATTTTTGGTTTTATAAGGGGTGATTGAGGCAAATTCAAGAATCTCAACAAGCTTAATTAGAAGGGTTAGTTATTAGCTAATGATGATAAGGAAGAGATTTTGATCACCCTACACAATGCAATGCACTAATATGTTCTTTTGTCATTTTCTTTTGAATGATAATGTGAGAGTTGTATGCAATGTTGACATTGTTGGCAACATGCTATTTAATGACCATGACCTTTTTCATTTGCT 1919 42.83 MGISWSNRRRNNYLQNPPPPPPPPYLASSSFYYPSEPQSLSPTPPPPPPPPPPQTHQFTNSHPPPPHSHPYGPTSQPLPLPPIPHPPAPAPAPAPHSYYFSGVYNSCNYGNSSMGRFNFHPYYTNQSNGWSQIRPAMGPPLLPPPPLPFVEHRQAKKVRNDVNVHKDTLRIEVDEQNPDHHLVSFVFDALYDGSITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFELDDLSKPSSAEDIFPLVISAETCSPSQCDDERIGEPQGDNSHMQITQAVLEKKNGGPFQVRVIRQLLWIDGVRYELREIFGIGSSSAEGFDDNDTGKECVICMTEPKDTAVLPCRHLCMCSDCAKELRLQSNKCPICRQPIEELIEIKINNSDQ 400
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 16256077 16260366 - XM_039019214.1 Bhi01g00859 23632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00859 400 Pfam Zinc finger, C3HC4 type (RING finger) 343 389 - -
Bhi01g00859 400 MobiDBLite consensus disorder prediction 1 89 - -
Bhi01g00859 400 SMART ring_2 345 383 IPR001841 -
Bhi01g00859 400 SUPERFAMILY RING/U-box 344 390 - -
Bhi01g00859 400 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 330 394 IPR013083 -
Bhi01g00859 400 ProSiteProfiles Zinc finger RING-type profile. 345 384 IPR001841 -
Bhi01g00859 400 PANTHER MAHOGUNIN 1 399 IPR045194 GO:0061630
Bhi01g00859 400 MobiDBLite consensus disorder prediction 38 89 - -
Bhi01g00859 400 MobiDBLite consensus disorder prediction 14 28 - -
Bhi01g00859 400 CDD mRING-HC-C3HC5_MGRN1_like---blasttree 344 384 IPR045195 -
Bhi01g00859 400 PANTHER E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED 1 399 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00859 Bhi-Chr1:16256077 Bhi11g02097 Bhi-Chr11:59421059 5.05E-94 dispersed
Bhi10g00125 Bhi-Chr10:2778764 Bhi01g00859 Bhi-Chr1:16256077 8.36E-06 dispersed
Bhi10g00126 Bhi-Chr10:2778764 Bhi01g00859 Bhi-Chr1:16256077 8.36E-06 dispersed
Bhi01g00859 Bhi-Chr1:16256077 Bhi01g00724 Bhi-Chr1:13450627 2.18E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00859 - - cmo:103483745 679.478