Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00926 ATTTTGTTTGTAATTTCAATATCCGACTGTTCCCGCCCGTTTCCAGCCACTTCTCTCATCGCTATGGACTAACTTTTCTTCCAACGGCAGAAGCAGATTCCATTTCTCTGTTTCGTCTCTGCCATTGATCGTAGATCGTCAAGAAATCAAGCTCGATTCTTTCTCCTCCGTTGCTAATCACTCTCACTCTCTATCCTGTTGTTGGCTGAGGAGTATTTGTGGTCACTCGATTTCGCAATCCGAAACCCTAGCAACACCAGTAGAGCTGATAATGAATCAGTACCACATCTATGAAGCCATTGGCCGTGGAAAGTATTCGACCGTGTATAAAGGGAGGAAGAAGAAGACGATCGAGTACTCCGCAATTAAAAGCGTGGATAAATCGCAGAAGAACAAGATTCTCCAAGAAGTCAGAATACTTCACTCCCTTGATCATCCAAACGTGCTCAAGTTTTACTCATGGTATGAAACTTCTGCTCACTTATGGCTGGTGTTAGAGTACTGTGTTGGAGGAGATCTCATGAGCATCCTGCGCCAGGATGGCAAATTACCCGAAGATTCAATTCATGATATTGCTAGTGATCTTGTCAGAGCATTGCAGTACTTACACTCGAAAGGAATCATATACTGTGATTTGAAGCCATCAAATATCCTACTGGACGAAAATGGTCATATAAAGTTATGTGATTTCGAACTAGCTAGAAAGTTGAGTGAGATATCAAAAACAAATTCAACGGCGCCACAAACGAAACGAGGCACACCCTGTTATATGGCTCCTGAATTGTTCAAGGACGATGGAGTCCACTCCTACGCGTCTGATATGTGGGCTCTTGGTTGTGTCCTATATGAATGCTTTGTGGGGAGGCCTCCTTTTATGGGAAGAGAGTTCACTCAACTAGTTAAATCTATCCTCTCAGATCCTACCCCTATCCTTCCCGGTAGCCCTAGTCGTCCTCTTGTTAACTTGATTAATTCATTGCTAGTAAAAGATCCAGCTGAAAGAATACAATGGCCTGAGCTTTGCGGTCATGCTTTCTGGCGTACTAAAATCACTCCAGTATCTTTACCTTCACAACCAGCTTTTGCAAATATGATAAATCAACATTCTAAACCTTGTTTGTCGGAAAGAAATGGTGAAAAACTTGCTCAGAACAGGACTCCTCCTAAATATAGAGAGAAAGATGCAAAGGGCACTTTAAGACAAAATGAAAATTCTGCTTTTGGCTCAAGTAAAAATGAAACACTTGTTAAAGGTACTCCAGGCAGTCAAAAAACTCAATCAAAGGTTTCTAGCAAAGTGGTCGAGGAGAAGAAGTTGAAAGAAACTCCATCTGCTTCCAAGGGAGTAAATCTTTTAAGACTTTCAAGAATAGCAAAATCAAACTTGCAAAGAGAGAATGATAAAGAAAATTACAGGAGACCCGTTTCTGGCAACTCTGAAAATGATTCCGAGGTTGAACTTAAGAATACTGATATGGAGCTTGATTTTAATGAGAATGTTGAAGATGAGTCTCCTGATGAACCTGAGGAGTCTGATAATTTAAATTGCAATCAGGAAGACAGGTCATCGAATGGGAATTATCAGGGGAAGATGGAGGAGGCTCAAAATATAGGAGACCTTTCAGATTATTCACCTGCAGTTAATATCAATGCCTCAGATCTACCAAATAAACATGATCAGGAATCATCCTTGGTGCGTACAGAAGTGGTTGCTACTTCACCTAGTGCTAGCCCTCAACTTAAGAACCAAAGAACGAAAGAAGGTTCAGCATATGCTCTTGATACCGATTCTTTGAAGTCATCCAATAACCTTTCGGAGTTTTTTTGGCATCAGTCTGATCTTTCGGTTAAACCAGTAATGCCCAGCAAAAAATCTGATAAAATGTCAGATGTCAATACTACCACCCTTCCTTTTGAGGGATTGCAAGCACCTGATTTTGTGAAGATGCCAAAGGAGCGGCAGGATGCCATGAGCAGTAGGATTATTGCTACTCTCGGTGGAAATTCTAGTATTGGTGAGAAGCAAAACATGATTAGATATCTTGAGATGCTTAGTAATAACGCTGAGGCAGCTAATATTTTGACCAATGGGCCCGTAATGCTCATGCTTGTAAAAATGCTCAAGCAGTCCAAGGTTTTGCAATTGCGTGTTCAACTCACATCACTGATTGGCTTGCTGATTCGCCACTCTACTTTTATTGAGAATGACTTGGCAAATTCTGGTCTTTTAGTTTCACTAACTGATGGCCTCAGAGACAAGCAAGAAAAAGTTAGGAGATTTTCTATGGCTGCTTTGGGCGAGTTGCTTTTTTATATCTCCACTCAGGAAGAGCATAATAGCAACGCCAATCCTCCAGAGTCTCCTTTGAAGGAGACTAGATCCCCCTCTGGATGGCAGGTTCCAAATTCATTAATTTCTCTAGTCTCATCAATTCTTCGAAAAGGAGAGGATGATATAACTCAACTATATGCATTGAGGACCATCGAAAACATTTGCAGTCAAGGAGCAATATGGGCATCTCGCTTTACCAGCCAAGATGTGATCAGCAACCTATGCTACATATATAGAGCTTCTGGGAAATCGGAGAATATAAGGCTCACTGCAGGATCATGTTTGGTTCGCCTAGTCCGTTTCAATCCTTCTTGCATTCAGTCAGTTACAGACAAATTATCTTCGAAGGACATGGCGTGTGCCCTAGTTAAGGGCAATCCACGTGAGCAGCAAATCACCTTAAATCTTCTAAACATGATCATGTTTGGAGGCCATATCTTAACTAGCATTGGAAGGTACCTTCTACCTTTAATGGAGGAGAAGAATCTTGTCTCCAGTCTCGTATCCCTTATTGAGCAGGCAAGTGAAGTTTTGAAAGGAAAGGCAATTGTTTTCGTGGCTTTCCTCTGTAAGAGTGTAAGACGGTGGTTGCCTCACTTCTTTTGCAATGCTAGGTTACTTTCTTCAGTGGACAGGCTCGCGAGGGAGAAGGACAACTATGTCCAGCAGTGTTTGACTGGATCTGTGCATATCGTGGCATCTATTGTGCCAAGTTTGTTGGATATGATTATAGGAGATATTCAACAAATGATGGGAGGACGACGTCATGGGCATATTTCCTCCCCCCTTACCAGTCGTGCTGCTCCAAAGACCAATATTCACTTGTTTCCTGTTGTCCTTCATCTTCTTGGAAGTTTAACCTTTAAGCGCAAGGTTGTTAGTCCTCAGGTGCTGCAGCAGTTGTCTGATCTAATCAGGCATATAGAGACACCATTTCAGGGCAGGGATGACTTCCAGATAACATTACTTCGGGTTATTGAATCTATCACAGAGGAATTCTCGGTCATACTTGAAAATCCAGAGATTTTTGTCCATAAAATTCTCCCCAGTTTGGCTGTTCTTTACAAAGGTAACAAGGATGGGGATGCAAGATTCTTATGCCTAAAAATTCTCTTTGATGTGCTGGTCATTTTCCTGAATGAACCGTCCTTAGATGGGCAAAGGTTGGAGGATCTAAAGCAGATAGCAAATTTGCACTTCCTTCCTCTCTATCCTGCCTTGATAGAAGATGATGATCCCATACCCATGTATGCTCAGAAACTTCTCGTGATGCTCATTGAGTGTAATTACATCAAAATTTCAGACATTTTACATCTAAAGACAATCTCCCAATGCTTTGAGTTTTTGCTTGGCGACCTTTCAAATGCAAATGTAAGTAGTGTAAAGCTATGTTTAGCGCTGGCGTCTGCTCCAGAAATGGAATCAAGAATACTTTCTCAACTCAAAGTCGTTAGAAGAATAGGAATTCTGCTAGAGTTTGTGTATGCCAAGGATATGGAGGATTTTCTCGAACCAACACTTGGTCTCTGTAGAGCTCTCCTTCTGCGTTCTGTTAGTTGTAGAAAGGGATTCATCCACTCAAAAGAACCGTTTCTTCTAGGTGACGGTACTCCCGAGCAAAATGTTCTCGTTAATCAGCAGGAATGCATTAGAGATATATCCGACTTCGGTAACAATTTTGGAGTTTTCTTGGAGTTGAGTCGGTCCTCAGAAGCAAACATTGCCGAGATAGCCTCTGAATGTGTAGTGTTTTTGGTTATGGCGGCTCCTAGGGAAGGCACCACTGGTCTTCTTACAAATCTTCACAAAGTTAGTGTAATCCTGGAGTCCTGGAGGAAAGGAGGCTGCCTCTTGCTTGTCCAGAGAATGCTGCATTCTCTCGGTTATGCTTGTCGACAGTACTTGGCCCATGCAATGATATTATCCCTTTCCACATCTGAAATTTCACGGATTGAGGCAATTATATCTGATATCAAGAGTTCAAGTACGCCACGTTTAGCTAATGATGCAATGCTTGTAGCTATGGAGTTGCAGCGGCTTCATCGTTGTATTTGAAACAAGCAAAGTTGTACTTTGTAAAATTGCCCAGTTAGCTAGCTAGGACAGGAGTAAAATCTTTTGTTCTAATACTATCATCGTACAGAAGAGAATGACCTACTGGAAAATGAGTGGAAAAAGAGGATTTGAACTCCCCAGGGCGGCTTTGAAGGATACCCTTCCAGTATCTATAGTTCCGAACATGGAACGTGGTTCTTGGTGAGTTCAATTCTTTATTTATTTGCACATTGTTATTTACATGTTGAATTCTTATTGTATGTGTGTATATATATTTTTGTACCGTGACTTTCTTCCACTGGCATCTCTATACTTTTTGCTTTATCAGTGCAATTTTATCATGTTAACTGTTAGTGTAGTTCTCTTGCTATAAATTATAATGGGAGGACCGTACCTTTACCTTTCTA 4794 41.32 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYSAIKSVDKSQKNKILQEVRILHSLDHPNVLKFYSWYETSAHLWLVLEYCVGGDLMSILRQDGKLPEDSIHDIASDLVRALQYLHSKGIIYCDLKPSNILLDENGHIKLCDFELARKLSEISKTNSTAPQTKRGTPCYMAPELFKDDGVHSYASDMWALGCVLYECFVGRPPFMGREFTQLVKSILSDPTPILPGSPSRPLVNLINSLLVKDPAERIQWPELCGHAFWRTKITPVSLPSQPAFANMINQHSKPCLSERNGEKLAQNRTPPKYREKDAKGTLRQNENSAFGSSKNETLVKGTPGSQKTQSKVSSKVVEEKKLKETPSASKGVNLLRLSRIAKSNLQRENDKENYRRPVSGNSENDSEVELKNTDMELDFNENVEDESPDEPEESDNLNCNQEDRSSNGNYQGKMEEAQNIGDLSDYSPAVNINASDLPNKHDQESSLVRTEVVATSPSASPQLKNQRTKEGSAYALDTDSLKSSNNLSEFFWHQSDLSVKPVMPSKKSDKMSDVNTTTLPFEGLQAPDFVKMPKERQDAMSSRIIATLGGNSSIGEKQNMIRYLEMLSNNAEAANILTNGPVMLMLVKMLKQSKVLQLRVQLTSLIGLLIRHSTFIENDLANSGLLVSLTDGLRDKQEKVRRFSMAALGELLFYISTQEEHNSNANPPESPLKETRSPSGWQVPNSLISLVSSILRKGEDDITQLYALRTIENICSQGAIWASRFTSQDVISNLCYIYRASGKSENIRLTAGSCLVRLVRFNPSCIQSVTDKLSSKDMACALVKGNPREQQITLNLLNMIMFGGHILTSIGRYLLPLMEEKNLVSSLVSLIEQASEVLKGKAIVFVAFLCKSVRRWLPHFFCNARLLSSVDRLAREKDNYVQQCLTGSVHIVASIVPSLLDMIIGDIQQMMGGRRHGHISSPLTSRAAPKTNIHLFPVVLHLLGSLTFKRKVVSPQVLQQLSDLIRHIETPFQGRDDFQITLLRVIESITEEFSVILENPEIFVHKILPSLAVLYKGNKDGDARFLCLKILFDVLVIFLNEPSLDGQRLEDLKQIANLHFLPLYPALIEDDDPIPMYAQKLLVMLIECNYIKISDILHLKTISQCFEFLLGDLSNANVSSVKLCLALASAPEMESRILSQLKVVRRIGILLEFVYAKDMEDFLEPTLGLCRALLLRSVSCRKGFIHSKEPFLLGDGTPEQNVLVNQQECIRDISDFGNNFGVFLELSRSSEANIAEIASECVVFLVMAAPREGTTGLLTNLHKVSVILESWRKGGCLLLVQRMLHSLGYACRQYLAHAMILSLSTSEISRIEAIISDIKSSSTPRLANDAMLVAMELQRLHRCI 1371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 17327574 17334231 + XM_039022045.1 Bhi01g00926 23699

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00926 1371 Pfam Protein kinase domain 4 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi01g00926 1371 PANTHER SERINE/THREONINE-KINASE ULK4-LIKE PROTEIN-RELATED 1 1367 IPR044591 GO:0000911|GO:0000914|GO:0008017
Bhi01g00926 1371 MobiDBLite consensus disorder prediction 295 309 - -
Bhi01g00926 1371 MobiDBLite consensus disorder prediction 451 468 - -
Bhi01g00926 1371 MobiDBLite consensus disorder prediction 370 438 - -
Bhi01g00926 1371 MobiDBLite consensus disorder prediction 370 385 - -
Bhi01g00926 1371 SUPERFAMILY ARM repeat 580 931 IPR016024 -
Bhi01g00926 1371 MobiDBLite consensus disorder prediction 406 423 - -
Bhi01g00926 1371 ProSiteProfiles Protein kinase domain profile. 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi01g00926 1371 Gene3D - 569 929 IPR011989 -
Bhi01g00926 1371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Bhi01g00926 1371 MobiDBLite consensus disorder prediction 451 496 - -
Bhi01g00926 1371 MobiDBLite consensus disorder prediction 282 354 - -
Bhi01g00926 1371 MobiDBLite consensus disorder prediction 475 496 - -
Bhi01g00926 1371 CDD STKc_ULK4 3 256 - -
Bhi01g00926 1371 SUPERFAMILY Protein kinase-like (PK-like) 1 288 IPR011009 -
Bhi01g00926 1371 MobiDBLite consensus disorder prediction 310 339 - -
Bhi01g00926 1371 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Bhi01g00926 1371 SMART serkin_6 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi01g00926 1371 MobiDBLite consensus disorder prediction 687 706 - -
Bhi01g00926 1371 Gene3D Transferase(Phosphotransferase) domain 1 1 337 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00926 K17545 ULK4; serine/threonine-protein kinase ULK4 [EC:2.7.11.1] - csv:101217007 2546.54
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00926 Bhi-Chr1:17327574 Bhi12g00565 Bhi-Chr12:17948212 4.41E-50 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g370 . . . . . Bpe14g01152 . . . . . Cma14g01648 . Car14g01481 . . Cpe03g01392 Bhi01g00926 . . . . . Lcy11g1459 . . . . . . . . . Cone7ag0183 Cone4ag0178 Lsi05g01496 . . Cme06g00683 Blo02g00576 . . . . . . . . . Cmo14g01692 . . . . . . . . . . . . . Cla05g00610 . . . . . . . Csa03g01408 Chy06g00651 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009196 1 1 4 0 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 2 1 1 34
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87303 PF00069 Pkinase 7.20E-68 CL0016 Bhi PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi01g00926 Bhi_Chr01 FPKM 12.707779 13.506474 13.114916 12.112835 19.502747 18.825304 21.677887 10.438593 11.314338 12.309845