Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00972 AGAGAGAGATGAAAAACAAAAAACGCTTTCAAAAGTGCTTCTCTTCTCTACAGAGAAAATTAATTTTAATTTCATTAATTATAAATTAAAAAATAATAATAATAATAAAAAAAAAGCTCAAAACAGAGATACTGTTGTGTAAGAAGCAAGAGAGAGAAGAAGAAAGAAGGGGGCAAAAGCAAAAACCCAGAAAATCCAAAAAGAAAGAAAGCGCTTCTTCTTCTTCTTCTTCCTCCTTCAGCTCCGTTTCTTCTTCTTCTACTTCTTCTCTCAAAGATGATCTCCATGTGATCGGAGCTTCCGTTCTTTCTTCTGCAACTCTTCAATCTCTTCTTCTTCTTCTTACACCCATTTTCTCTTCATCACTTTCCCTTCACTCATTCTCACCCTTACGGCAGGCCGTACCATGAAGCCGTACGGTCACTCTATTGAAGGTTCTCACTCCGATCCGTCACCTGAATGGACCGCTTCCGGACCTCATACACCCCATGGAGGCTCGCTTTGGCCTTTGGGATCCAGGGAAAGGGAATCGTACCCTGAACGTCCTGAAGAGGCTGATTGTATATATTACCTACGTACGGGATTTTGTGGATATGGCTCTCGTTGTAGGTTTAATCATCCCCGTGAGCGTACCGCGGTTTTAGGAGGTTCTAGACCTGGTGGAAGAGAGTATCCCGAGCGAATAGGGCAGCCTGTGTGTCAGTACTATATGAGGACAGGAATGTGCAAATTTGGTGCTTCCTGTAAGTATCACCATCCTCAGCAGGAAAGAGGTTCTCTCAGCCCCGTGTCGCTGAATTTCTATGGCTATCCACTACGGCCGGGTGAGAAGGAGTGTTCTTATTATTTGAAGAGTGGACAGTGCAAGTTTGGTGCTACGTGCAAATTTCATCACCCAGAACCAGCTGGCTTGCAGTTTCCAGCACCATCACCCGTTCAGGTTACACCAATGCCACCTCCAGTGCCTGCACCCTCTGTTTATCCTCCTGTGCAGTCTCCATCTGCTCATTCGTCACAACAATATGGAGTAATACTTGCAAGGCCTTCATTGCTGTCAAGCCCATACGTTCCTGGCCCTTATGGTCCTATGTTGGTTTCCCCAGGCGTTGTTCAATTCCCAAGTTGGAGTCCTTACCCAGCACCTATGAGTCCAGTAGCCTCTCCCAGTGCTCAACCTTCTGTTGGATCAGGGCCACTTTATGGTCTGGCACATGTTTCGCCTTCTGCATCTGGCTTTGCAGGATCTTATCAACCCATGCCGTCTGCTGGCCCGTCAAGTACTAGCCAAAAGGAGCACTCATTCCCAGAAAGACCTGGGCAGCCAGAGTGTCAATATTACATGAGAACGGGGGATTGTAAATTTGGATCTTCTTGTAGATACCATCACCCACCAGAATTGGTTACTTCGAGGCCAAGTGTTCTCCTTAGCCAACTAGGTCTTCCTCTACGCCCGGGTGCTCCACCTTGTACTCACTTCATGCAGCGAGGAATGTGCAAGTTTGGCCCTGCGTGCAAATTTGACCACTCGATGGATCGACTTAGTTACAGTCCATCTGCATCATCTCTTGCAGATATGCCAGTGGCACCCTACCCTGTGGGATCAGTAGCCGGTACTTTAGCCCCATCATCCTCATCCTCAGAGTTGAGGCCTGAACATTTTTCAGGATCCAGAAAGGATTCTAACCCTTCAAGAATGTCTTCATCAATGAGCACATCTAGTGGATTGGTCGGTTCAACTACATCGAGGACAGAAATGCATTCTCATTCAAGTGTTCAACGGTCTTCTCAAAGTTCTGGCCCGTCAGTGGGCAGTACCTCCAGCACCACCAGTGTGGAGGGTCGTACTTGAAGCTAAGCTGCCTCAGGATCAAAACATCCTATTTTTTGCCCAAGCCCAAAACCAAAGATCTTTTCTTTTCCTATTACAATGGTTCCCATAGTCCAGGTCTAGCATACCTCAGCTCTGACCTTCTGTGTCCATACAATCCTTATATTTAAATTTATCTCAGCCTGAATAAGTTATGGTCAACCTAAAAGAATGTAGCAAATTTCGTACAGTCTTCTGCCTCTGCCTTATGAATAATCCTGAAAGCAGCGATAGCAGTTAGGTACCTTTGCATCACGATTTCCTTTCTGGAGTTTGTTGCCCATTTTTGCTGCTTTGATCAGTATTTTCCAAGACAAACAAAAGGGTCTGTTCCACGATGATTTCTTTTCGAGCTACGCTCTGCTTTTGCCCATCTCTTTCCAAGTTTTCCCATGACCAGGGCACAAGCTTTCAATTCGAATTGAATATGAATTTGAAGCTGTGTTATTCCCACTCGTTTTTTTCCCTCATTTATTGTGGAAAAAGATGTATTTAAGACTCTGGGAGTCACTCCAATGGCAATGTGATCTTGTACGGGATTTTAATATCAAGTTATGTAGTGAAACATTCATTGCTAGACTTGGCTTTGGATGAATTTACAAAGTTTACATTTCAAAAGAAACCTGCAAATTCTATAACAATTTCCTTTTTTCTTTTGCTTATGATATATTGTATTCCAGTGCA 2551 44.3 MKPYGHSIEGSHSDPSPEWTASGPHTPHGGSLWPLGSRERESYPERPEEADCIYYLRTGFCGYGSRCRFNHPRERTAVLGGSRPGGREYPERIGQPVCQYYMRTGMCKFGASCKYHHPQQERGSLSPVSLNFYGYPLRPGEKECSYYLKSGQCKFGATCKFHHPEPAGLQFPAPSPVQVTPMPPPVPAPSVYPPVQSPSAHSSQQYGVILARPSLLSSPYVPGPYGPMLVSPGVVQFPSWSPYPAPMSPVASPSAQPSVGSGPLYGLAHVSPSASGFAGSYQPMPSAGPSSTSQKEHSFPERPGQPECQYYMRTGDCKFGSSCRYHHPPELVTSRPSVLLSQLGLPLRPGAPPCTHFMQRGMCKFGPACKFDHSMDRLSYSPSASSLADMPVAPYPVGSVAGTLAPSSSSSELRPEHFSGSRKDSNPSRMSSSMSTSSGLVGSTTSRTEMHSHSSVQRSSQSSGPSVGSTSSTTSVEGRT 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 17827598 17832099 - XM_039048328.1 Bhi01g00972 23745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00972 480 MobiDBLite consensus disorder prediction 1 40 - -
Bhi01g00972 480 ProSiteProfiles Zinc finger C3H1-type profile. 46 74 IPR000571 GO:0046872
Bhi01g00972 480 ProSiteProfiles Zinc finger C3H1-type profile. 302 330 IPR000571 GO:0046872
Bhi01g00972 480 PANTHER PROTEIN PHOSPHATASE RELATED 14 462 - -
Bhi01g00972 480 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 58 14 462 - -
Bhi01g00972 480 SUPERFAMILY CCCH zinc finger 140 166 IPR036855 GO:0046872
Bhi01g00972 480 SMART c3hfinal6 302 329 IPR000571 GO:0046872
Bhi01g00972 480 SMART c3hfinal6 92 119 IPR000571 GO:0046872
Bhi01g00972 480 SMART c3hfinal6 348 375 IPR000571 GO:0046872
Bhi01g00972 480 SMART c3hfinal6 46 73 IPR000571 GO:0046872
Bhi01g00972 480 SMART c3hfinal6 138 165 IPR000571 GO:0046872
Bhi01g00972 480 Gene3D - 42 121 - -
Bhi01g00972 480 Gene3D - 291 338 - -
Bhi01g00972 480 SUPERFAMILY CCCH zinc finger 48 75 IPR036855 GO:0046872
Bhi01g00972 480 ProSiteProfiles Zinc finger C3H1-type profile. 138 166 IPR000571 GO:0046872
Bhi01g00972 480 ProSiteProfiles Zinc finger C3H1-type profile. 92 120 IPR000571 GO:0046872
Bhi01g00972 480 MobiDBLite consensus disorder prediction 278 299 - -
Bhi01g00972 480 Gene3D - 122 171 - -
Bhi01g00972 480 SUPERFAMILY CCCH zinc finger 306 329 IPR036855 GO:0046872
Bhi01g00972 480 SUPERFAMILY CCCH zinc finger 352 379 IPR036855 GO:0046872
Bhi01g00972 480 MobiDBLite consensus disorder prediction 403 480 - -
Bhi01g00972 480 Gene3D - 347 395 - -
Bhi01g00972 480 MobiDBLite consensus disorder prediction 278 305 - -
Bhi01g00972 480 MobiDBLite consensus disorder prediction 424 480 - -
Bhi01g00972 480 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 351 375 IPR000571 GO:0046872
Bhi01g00972 480 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 304 329 IPR000571 GO:0046872
Bhi01g00972 480 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 49 73 IPR000571 GO:0046872
Bhi01g00972 480 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 140 165 IPR000571 GO:0046872
Bhi01g00972 480 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 95 119 IPR000571 GO:0046872
Bhi01g00972 480 SUPERFAMILY CCCH zinc finger 94 122 IPR036855 GO:0046872
Bhi01g00972 480 ProSiteProfiles Zinc finger C3H1-type profile. 348 376 IPR000571 GO:0046872
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00972 Bhi-Chr1:17827598 Bhi02g01343 Bhi-Chr2:33773294 1.11E-101 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
92 PF00642 zf-CCCH 1.30E-07 CL0537 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00972 - - csv:101221033 816.609