Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g01001 AGAAAGAACAGAACAATGGGGTTTTAACCAGCTCACATTACGTGGGTCATTCAATGCATAACTCATAAGAGAGAGATGGAGAGAGGAGCCAACCAATTTATTTTTGACTGGTCATTTATTAGTTATACTAGGACTGGTAGCTACTTGTTCTGACGACTCATCTAATAATTTCTCATAGTATAATTTTAACCATCTTCTTTGGTAGATTTAGTGGCTTTGGATAATCAGTCTTAAATAATTCAACTCCACTAACTTTAATAATATTTACTGTTGCAGTTTGTAGATTTATTGAAAAACTATGACTAAACAACTTGCACTCTTACTAACTTCAACATATTAACTTCAAACTTCATAACTCAATTTAACACCACATACACTTACTATAGGTGTTGTCAAATTGACTTTATAAATGCTTAAAAGCTCTGTCTTAAGCACTATAAAAGTTATTCAAAACAAGTTTTATGTATAAGGTTAAATACTGACACTTTCCGATTTTTAAAGTTTACTTTGTTTATTTTGAATCTCTTTGCTTGGATTCCCATTTGAAATCTCATTCTTTTTCAAAATCTGAACACAAGTTATTTGATAAGAACAGCTTTTCATAGCATCTAATATTTGGATTTTTTTTATATAAATAAAATAGTAGGAAGTAGGCTATAAAGTACAAGGAACCTAATTTGAAAACCAAAATCCCTATCAAAACCTAATAAAAATGTAGAAGGAAAGAAATCTTAGATGCCTGTGGCAAAGATTTCTCAATTTCCACACAAGGAAAACCCTCATTGGACAAATCTTGGTATTCATAAAACCTAGTAACCATTCGTCATTAATGAGTCAAATAGAAGAGGAAAGGTTGCAGCAAAGCAAATTTGAAAAGGCGAGCTGTGATTATGAATGTAGGGGTCATGAATTGGGAGAAGATAATTATAGTATTATACATTGGGTGGAAAGAGAAAAAGAACAATAAATCTTGAAATGTGCTACAAAAGAAGATTAAATAATGGGGTCAATCTAGATTAAAGAGGGGGTAGTTCAGCTAATTAAAAAGACCATTTAATGCATGATGATTTTAAATTGTTAAAGGGAGTTTTAGAGTTTCCAGGATATTTGTTGGGAGAGAGTGAAACCTGGCAGCCTGCTTTTAAATTCCACTATAATTACGGGAGAAAGCTAGGAAAGCTGCTACTCTTTTGTCATTTTCTTGATAGACCACTTCTCTTTTCGAACTCCCTTCTTCTTATGTATATTAGCAAAGCCATGGAGAATAATGGCTCCTTGACTCTATAGTTTCACTTTCAATCTCTCTTTCTGAACCAGAAGATTTTTGGTGATTTTTCATCTCTTTCTGAACTTGGACTTTTACCTCCAATGGCTGTGGTATGTTCTGAAGCAGCAGCCTCGCAACCTCTCAAAGCACAGGTTTGGGTCTTGAAAGTTTCTATTCACTGTGAAGGATGCAAGAGGAAGGTTAAGAAAGTTCTACAGAGCATTGATGGTGTTTATACGACCAACATTGACCCGGACCAACAGAAAGTTACGGTCACTGGTAATGTTAGTCTTGAGACTCTGACCAAGAGGTTGGCAAAGGCAGGTAAACATGCAGAAATTTGGCCAGAAAAGCAAGCGGGAAAAGAGAAACAGTTGATCAAGATGTTGGACACAAACAAAGGGAAAGACCAAGAAAATGGAAGAAGTTCGGGTACTAATAAAGCTTCAGCAAAGAAGGTCGAGTTTAAGGTCAGCCCTGTCAAGAACAACCGTGAAGAACAGAATGAGAAGTCAAAGAATATTGGAAGCTCTCCCAAAAAGCCTCCGGCCAGGGAGGCCTCGCCGGCATCCGGCTCCAAGGGCAATACTACAGGACATGACGGTTGTTCTCCAGACAAAAGTGGTGAAAAGAAGAAAACAAAGGGGCAACCAGGTAATAACAATAGTGATAAATCAGGTTCAAACCCCCAAAATGGGCATGGGCCAGTCAATGAGGAACCAGATGTGGGCCTAAGAAATGGTCACCCACTGGCCCAACAAGTATACACGGGCCCAAAGGGTTATTTTTTCCCCCCACCTATTTTGGGGTTAAATTACAAAGCACCGCATTTAGGTAAAGGTCCCGAATTTCTTCACCATGTCCCACTGATTCCACTTTCATATTCAAATGATCAGACAGAAAATTATGAGGATCGTGCAAAGCCACAGACCTACCTGGATTATTTCAGTGAAGAAAATGCCCATGGATGTTTCATCATGTGATGTGCTAACATCAAGCAATAACAACTCAAGGGGAATATATAAATTTGACGTGCTGGTTTATGTTGTAAAACAGCGAAGATGAGTATAAATGTACATGAGTGAGATCCAGAATGACAGGAAGGTTAGCAAGTAGAAAAGTTTGGAGGGGTGGGTTAGGTGCTTCTAATTTTTGGGCTAAAAGAACATTAGGTTTATTGTGCTCTCTATCAAGTGAAACGTTTTGCAGAAGCTTTTCTAAACAA 2492 37.24 MAVVCSEAAASQPLKAQVWVLKVSIHCEGCKRKVKKVLQSIDGVYTTNIDPDQQKVTVTGNVSLETLTKRLAKAGKHAEIWPEKQAGKEKQLIKMLDTNKGKDQENGRSSGTNKASAKKVEFKVSPVKNNREEQNEKSKNIGSSPKKPPAREASPASGSKGNTTGHDGCSPDKSGEKKKTKGQPGNNNSDKSGSNPQNGHGPVNEEPDVGLRNGHPLAQQVYTGPKGYFFPPPILGLNYKAPHLGKGPEFLHHVPLIPLSYSNDQTENYEDRAKPQTYLDYFSEENAHGCFIM 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 18270707 18273524 + XM_039026580.1 Bhi01g01001 23774

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g01001 293 Gene3D - 15 80 - -
Bhi01g01001 293 MobiDBLite consensus disorder prediction 185 201 - -
Bhi01g01001 293 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 35 2 293 - -
Bhi01g01001 293 MobiDBLite consensus disorder prediction 124 140 - -
Bhi01g01001 293 ProSiteProfiles Heavy-metal-associated domain profile. 24 80 IPR006121 GO:0046872
Bhi01g01001 293 CDD HMA 20 79 IPR006121 GO:0046872
Bhi01g01001 293 Pfam Heavy-metal-associated domain 22 77 IPR006121 GO:0046872
Bhi01g01001 293 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 2 293 - -
Bhi01g01001 293 MobiDBLite consensus disorder prediction 170 184 - -
Bhi01g01001 293 SUPERFAMILY HMA, heavy metal-associated domain 16 82 IPR036163 GO:0046872
Bhi01g01001 293 MobiDBLite consensus disorder prediction 98 218 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g01001 - - - csv:101211229 518.464
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01001 Bhi-Chr1:18270707 Bhi06g01437 Bhi-Chr6:43852842 5.41E-26 dispersed
Bhi04g02280 Bhi-Chr4:62318558 Bhi01g01001 Bhi-Chr1:18270707 1.26E-10 dispersed
Bhi01g01001 Bhi-Chr1:18270707 Bhi01g00858 Bhi-Chr1:16248569 2.07E-25 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g319 . . . . . . . . . . . Cma14g01622 . Car14g01447 . . . Bhi01g01001 . . . Hepe05g1452 . Lcy11g1419 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008753 2 1 0 1 0 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 1 0 3 34
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi01g01001 Bhi_Chr01 FPKM 2.177835 2.80642 0.413075 0.466032 0.365752 0.391577 0.33603 0.0 0.0 0.0