Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g01003 TATTTATTTATTTATAATTAAACAAAAAGCGAAACATTGAATCTAACAAAAGTTGTAAAAATGGGAACCAAAGAAAAAAATTGCCTAAATTTAGCAGAGCGTCTTCCTGACCATCCAATGGCCTTCGCCTTTAAGTCATATAGTATGCTTCAAGAAGCTTCAACAAAACCTGAGGGAGAACTTGAAGTTAGCTTTGGTTATAAATGCAATGGTAACATATATGAAATTCATGATGTTTCTGACAAGTTCGAGATCCAGCCTAGACTTCCAAAGATCAGCAGTTTCTCTTGCTTATCTGGTGCTGCCTTGAGTGCTAATGCAACCCTAGCAAACACAAATATATGCAATGGATTGATAGGAGAAGAAATTCTGCCGACCTGGGATTCTCCTACTTCATTCCGAAAGGTTCCCTCATCACCTACCCTTTCAAGGTTGGATATATTGTCATCGTCTCTGCAGAGTAGTCTGTCAAACTTAAGTTGCAGTCCATCTACCTCAACCTCTGAATATGATTCATACTTGTTGAAATCCATGAGTGCTCCATCCGGAAGTGAAGGTTTTCTTAATGTTAAGGAAGTGCAAGTGGCAGGTGGAGCTGCTGGTGAGGACAGGGTCCAAGCCGTTTGTTCTGAAGAAAATGGATGGCTATTTTGTGCAATTTATGATGGTTTCAATGGAAGAGATGCAGCTGATTTTCTTGCTGGCACATTGTATGAAACCATCGTATTTTATTTTAACCTACTAGATTGGGAAGCTAAGAATGAAACCTCTGACGGTTTGGACATGGACAATTCACATCTTCTTGATGATAGTAGCATCACTCAAGGAAGATTTCCTCCTTTGGGAAATAATAATAAAATTGCTTCAGATATGCACAATGTATTAGAGAACCATTCATATGCCAAAGCAGGAATGACAAACTACCCTCTAAGGTATGGGGTGTTCGATAGCCTCCAGCGTGCTCTTAGTCAAACAGAGAATGATTTTCTGCACATGGTTGAACAGGAAATGGAGGATCGTCCTGATTTAGTTTCTGTTGGGTCATGTGTTTTAGTTGTTCTTCTTCATGGAAAGGATTTGTACACACTAAATTTGGGTGATAGTAGAGCAGTACTAGCTACCCTTGATGAGGGTGCTATGAGAGGGAATGGGGGACTGAAGGCTGTACAGCTCACTGAGAGTCACACTGTGGATAATGAACTTGAAAGAGCACAGTTACAACATGATCATCCTGATGATCCGACAATCATTGTTGGTGGGAAAGTCAAAGGAAAACTGAAGGTGACTCGGGCGTTTGGAGTTGGCTACTTGAAGACGAAAAAATTTAATGATGCTTTGATGGGTATTCTTCGAGTTCGTAATCTAATAAGCCCTCCCTATATTTCCACTCAACCGGCATTGTCTATCCATAGGATATCAAAATCAGATTGCTTTGTTATAGTTGGAAGTGATGGTTTATTTGACTTTTTTGACAATGAGGAGGCAGTGAACCTTGTCCATTCATATATCTTGAGCAACCCAACTGGTGATCCTGCAAAATTTTTACTGGAGCAGCTTCTATTGAAAGCAGCTGATTGCGCAGGTTTTAGCAAAGAAGAATTAATAACCATTCCAGCCGGCAGGAGAAGGAAATATCATGATGATGTAACTGTTATTGTAATCATCCTTGGAACAAATCAGCGCACCACAAGGGCATCTACTAGCATAGATAATTTGCTGGAAGATTGAAGAACGGTTAAAGTTTGGATGTAACCACGAAGGATTGTCTTAGGGCCTATCACTGGAGATTCTAATTACAAAGATCATTGTTCCTTCTCCATTGTGGTCGATCTCTAAGATATGCTATATTACCTTTTCCAATA 1862 39.74 MGTKEKNCLNLAERLPDHPMAFAFKSYSMLQEASTKPEGELEVSFGYKCNGNIYEIHDVSDKFEIQPRLPKISSFSCLSGAALSANATLANTNICNGLIGEEILPTWDSPTSFRKVPSSPTLSRLDILSSSLQSSLSNLSCSPSTSTSEYDSYLLKSMSAPSGSEGFLNVKEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYETIVFYFNLLDWEAKNETSDGLDMDNSHLLDDSSITQGRFPPLGNNNKIASDMHNVLENHSYAKAGMTNYPLRYGVFDSLQRALSQTENDFLHMVEQEMEDRPDLVSVGSCVLVVLLHGKDLYTLNLGDSRAVLATLDEGAMRGNGGLKAVQLTESHTVDNELERAQLQHDHPDDPTIIVGGKVKGKLKVTRAFGVGYLKTKKFNDALMGILRVRNLISPPYISTQPALSIHRISKSDCFVIVGSDGLFDFFDNEEAVNLVHSYILSNPTGDPAKFLLEQLLLKAADCAGFSKEELITIPAGRRRKYHDDVTVIVIILGTNQRTTRASTSIDNLLED 555
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 18274218 18279524 - XM_039026524.1 Bhi01g01003 23776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g01003 555 Gene3D - 142 545 IPR036457 -
Bhi01g01003 555 CDD PP2Cc 180 536 IPR001932 -
Bhi01g01003 555 SMART PP2C_4 158 534 IPR001932 -
Bhi01g01003 555 Pfam Protein phosphatase 2C 299 487 IPR001932 -
Bhi01g01003 555 ProSiteProfiles PPM-type phosphatase domain profile. 167 536 IPR001932 -
Bhi01g01003 555 PANTHER PROTEIN PHOSPHATASE 2C 31 548 IPR015655 GO:0004722|GO:0006470
Bhi01g01003 555 SUPERFAMILY PP2C-like 181 537 IPR036457 -
Bhi01g01003 555 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 31 548 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00997 Bhi-Chr1:18270189 Bhi01g01003 Bhi-Chr1:18274218 0 dispersed
Bhi01g01003 Bhi-Chr1:18274218 Bhi11g00135 Bhi-Chr11:3174479 3.39E-13 dispersed
Bhi01g01002 Bhi-Chr1:18272224 Bhi01g01003 Bhi-Chr1:18274218 0 tandem
Bhi01g01003 Bhi-Chr1:18274218 Bhi01g01004 Bhi-Chr1:18274390 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g01003 - - bhj:120073713 1038.48