Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g01041 ACAGAAGAATTCAAGGCAGTGCTCCTTCTTCCCTTTTGCCATTAACCAACCAAAACAAAAACAAAAAACCCAAAAAACTCCAAATTGAGAATCTTTAGTAAAAAAAAAAAAAAAAAAACATGGGTGATGATGGAGGGAAGAACAAGAAAGCTGCGCTCATCGGAGTATCTTCCTTGTTTCTTGTTGCCATGGTAGTTGCAGTGGCAGTCGGCGTCAATCGCAAAGACTCCAATGGCATCGCTGGCGGCGGTTCCACGGCGGAAATCTCCACCTCCACCAAAGCCATCAAGGCGCTCTGTCAGCCCACTGATTACCAAGAAACCTGCGAGAAAGCTCTGTCCCAAGGCGGATCCAACACGAGCGACCCACGTGAGCTAATCAAAGCTGGATTCCATGCTGCCGTCGACGAAATCAAGTCGGCCATCGGAAATTCCTCCCTTTTGAAAGATTCCGCCACTGACCCCATGGCTAAACAAGCTCTTGACGCTTGTGGCGAGCTCATGGATTACGCAATTGACGATCTCTTAATTTCCTTTGACAGAATCACTGACAATTTTGACATCCAGAAAATGGATGATTATATTGAGGATCTTAAGGTTTGGTTGAGTGGCGCATTAACTTATCAGGAAACTTGCTTGGATGGATTCGAAAATGTCACTGGCGATACAGGGGAAAAGATGAAGAATTTGTTGAAAATGTCGAAAGAAATGACAATTAATGGGCTTGGAATGGTGAGTGAAGTTAATTCAATTATGGCATCTTTTGGGCTTCCATCGGCTGGACGACGACTGTTGACGGAGGAATCCGATGAACAAGAGGAAGAGCCGTCGTGGGTCAGTGACAGACGTGGGCTACTCCAAGCCACCGGCGCCACCATCAAGGCGGATGTTGTGGTGGCGAAAGACGGAAGTGGGAAGTACAAAACAGTGAGTGAAGCCTTAAATGATGTCCCAAAGAAGAGCAATAAAACGTTTGTGATTTATGTAAAAGCAGGAGTTTATCAAGAACAAGTAATGGTAGACAAAAGTATGACTTGGGTAATGATGATCGGAGATGGGCCGACTAAAACTAAAATCACCGCCGGCAAGAACTTCATTGACGGAACTCCCACCTTCAAAACCGCTACCGTTGCGGTGATCGGAAGCAACTTCATCGCGAAGGACATGGGATTCGAGAACTCTGCCGGAGCAGCTAAGCACCAAGCAGTTGCACTCCGAGTTCAATCTGACATGTCCATCTTCTACAATTGTCAAATGGACGGTTACCAAGACACTCTGTACACTCATGCTCACCGTCAATTCTACCGAGACTGCACCATCACCGGCACCATCGATTTCATCTTCGGCAACGGTGCTGTCGTCTTCCAGAACTGCAAGATCCTCGTGAGGAAGCCAATGGAGAATCAACAATGCATCGTCACTGCTCAGGGCCGAACTCAACGGAAGGAGCCCACCGCCATAATCTTGCAGAATTGCGTCATTTCATCTGACCCTGATTTCTTCCCTGTTCGCCACATCCACAAGGCATACCTCGGTCGCCCATGGAAGCAATATTCAAGAACCATTATCATGCAGTCACAAATTGATGATTTGATCCAACCTGAAGGGTGGCTTCCATGGATGGGCGATTTTGCTCTCAACACTCTGTTTTATACAGAGTACAATAACAGGGGACCTGGCGCCGCCAAGGATAATCGGGTTAAGTGGAGGGGAATTAAGCAGATTACGCCAGAGCACGCTGTCGATTTCACTGCTGGGAGATTTATTCGTGGCGATCCGTGGATCAAGCCCACCGGAGTGCCGTACACTTCCGGCATGATGGCAGTGTAAAAAAGAGAGGAAGAAGAAGAACAGAACAAGAAGAGTTTTTTTAGTAACGAT 1880 47.02 MGDDGGKNKKAALIGVSSLFLVAMVVAVAVGVNRKDSNGIAGGGSTAEISTSTKAIKALCQPTDYQETCEKALSQGGSNTSDPRELIKAGFHAAVDEIKSAIGNSSLLKDSATDPMAKQALDACGELMDYAIDDLLISFDRITDNFDIQKMDDYIEDLKVWLSGALTYQETCLDGFENVTGDTGEKMKNLLKMSKEMTINGLGMVSEVNSIMASFGLPSAGRRLLTEESDEQEEEPSWVSDRRGLLQATGATIKADVVVAKDGSGKYKTVSEALNDVPKKSNKTFVIYVKAGVYQEQVMVDKSMTWVMMIGDGPTKTKITAGKNFIDGTPTFKTATVAVIGSNFIAKDMGFENSAGAAKHQAVALRVQSDMSIFYNCQMDGYQDTLYTHAHRQFYRDCTITGTIDFIFGNGAVVFQNCKILVRKPMENQQCIVTAQGRTQRKEPTAIILQNCVISSDPDFFPVRHIHKAYLGRPWKQYSRTIIMQSQIDDLIQPEGWLPWMGDFALNTLFYTEYNNRGPGAAKDNRVKWRGIKQITPEHAVDFTAGRFIRGDPWIKPTGVPYTSGMMAV 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19209496 19211456 - XM_039018905.1 Bhi01g01041 23814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g01041 569 TIGRFAM PME_inhib: pectinesterase inhibitor domain 51 196 IPR006501 GO:0004857
Bhi01g01041 569 ProSitePatterns Pectinesterase signature 1. 281 300 IPR018040 -
Bhi01g01041 569 Gene3D - 250 566 IPR012334 -
Bhi01g01041 569 ProSitePatterns Pectinesterase signature 2. 400 409 IPR033131 -
Bhi01g01041 569 SUPERFAMILY Pectin lyase-like 251 565 IPR011050 -
Bhi01g01041 569 SMART PMEI_2 51 204 IPR006501 GO:0004857
Bhi01g01041 569 PANTHER PECTINESTERASE 12 567 - -
Bhi01g01041 569 Gene3D Invertase/pectin methylesterase inhibitor family protein 50 209 IPR035513 -
Bhi01g01041 569 Pfam Plant invertase/pectin methylesterase inhibitor 55 196 IPR006501 GO:0004857
Bhi01g01041 569 PANTHER PECTINESTERASE 12 567 - -
Bhi01g01041 569 CDD PMEI-like_3 58 207 - -
Bhi01g01041 569 Pfam Pectinesterase 256 552 IPR000070 GO:0030599|GO:0042545
Bhi01g01041 569 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 54 206 IPR035513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01041 Bhi-Chr1:19209496 Bhi02g02062 Bhi-Chr2:56183188 0 dispersed
Bhi01g01041 Bhi-Chr1:19209496 Bhi12g02036 Bhi-Chr12:63545398 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g01041 K01051 - csv:101212686 994.956