Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g01062 GGATTTTCAGATCCGCTTGCGGCCACTGCATTTGTGTCGGTTGATTCCTATTTCATTCTCCTCGCTTTCTCCCTCTCTCAAAATTCTTTCCCTCCTTCTTTCCCCTCTGCATTTTCCTTTCAATCTTTCGTTTTCCCTCGGTTTTCTGAATTCCAACCACTTGTTTCTCTTCATTCCATAACTTCTTTCTCTCCATCTTATCTCTTTCTTATCCGTTTTCCCCTCCTTTTCTTTCCACCATTGATTTCGCTCTCTGGGTTTGATCTCTTGCTTCCTTCTCAGATCCCCTTTCTCTTCTTTGATCTCACTTCCCCTGTCTTCCTCTGTTTTCGATCGAGGGTTTCCCCAGTTACTTACTTACCCATCATTTGATTCTGTGTTTTCTGATCGTTTCACTCGCTACCCTCTTCGAGTTTTGGGTTTTTTAAATCTGGGTTTCTCTTAGATCTCTTTAGTAGCGGGTGTATGATGATGGATCCGAGTGACAGAGGATCGGAGTCGGAGGACATGTCGGGGAAGAATACCGGTGGGGTTTCTTCGGAGGAGAGTCAAGTGAATGAGCAGAACAAGAAGACTTGTGCTGACTGTGGTACTTCGAAAACCCCTTTATGGAGAGGCGGGCCGGCTGGTCCAAAGTCTCTTTGCAATGCGTGTGGGATCAGAAGTAGGAAGAAGAGAAGAGCGATTTTAGGGTTGAGCAAAGGGGTTGTTGAAGATAAGAAGAACAAAAAGAGCAATAATATTAGCAATAGTAAGTTGAGAGATAGTTTGAAACAAAGGCTTTTGGCTTTGGGTAGAGAAGTTTTGATGCAGAGATCTACTGTTGAGAGGCAAAGGAAGAAGTTAGGAGAAGAAGAACAAGCTGCTGTGCTTTTAATGGCTTTATCCTATGGCTCTGTTTATGCTTGAAACAGCCATTGTCGTGATCAGAAAGAACAATAAGGGAAAAATATGAAAAAAAAAGTGCTTCTAAAGCAGCAAAATCTGACCCAGAAGTGTATCTTCATCCATTTTGTTAAATCTTTCCCCAAATATTGAGTGAAATTCTCTTAGTTCATTATTATTCCTCCTCCCCCTTAGGATCTATTCTCTTTTTGTTGTATTAACTAACCATTGGTTTTTTTGGATGTTGGAGAGTAATGAGTAATGTAGTATTGATAATGAATTTTGTTGAACATTGTCATTTCA 1188 40.91 MMMDPSDRGSESEDMSGKNTGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKRRAILGLSKGVVEDKKNKKSNNISNSKLRDSLKQRLLALGREVLMQRSTVERQRKKLGEEEQAAVLLMALSYGSVYA 147
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19721471 19722831 - XM_039021947.1 Bhi01g01062 23835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g01062 147 ProSiteProfiles GATA-type zinc finger domain profile. 32 68 IPR000679 GO:0006355|GO:0043565
Bhi01g01062 147 PANTHER OS01G0976800 PROTEIN 2 147 - -
Bhi01g01062 147 CDD ZnF_GATA 37 89 IPR000679 GO:0006355|GO:0043565
Bhi01g01062 147 PANTHER OS01G0976800 PROTEIN 2 147 - -
Bhi01g01062 147 Pfam GATA zinc finger 38 72 IPR000679 GO:0006355|GO:0043565
Bhi01g01062 147 ProSitePatterns GATA-type zinc finger domain. 38 63 IPR000679 GO:0006355|GO:0043565
Bhi01g01062 147 Gene3D - 32 131 IPR013088 GO:0006355|GO:0008270
Bhi01g01062 147 MobiDBLite consensus disorder prediction 1 53 - -
Bhi01g01062 147 MobiDBLite consensus disorder prediction 15 41 - -
Bhi01g01062 147 SMART GATA_3 32 89 IPR000679 GO:0006355|GO:0043565
Bhi01g01062 147 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 31 72 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi01g01062 Bhi12g01901 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01062 Bhi-Chr1:19721471 Bhi02g02154 Bhi-Chr2:58840678 1.64E-23 dispersed
Bhi11g00074 Bhi-Chr11:1812731 Bhi01g01062 Bhi-Chr1:19721471 3.67E-07 transposed
Bhi05g00589 Bhi-Chr5:15387810 Bhi01g01062 Bhi-Chr1:19721471 4.92E-07 transposed
Bhi01g01062 Bhi-Chr1:19721471 Bhi12g01901 Bhi-Chr12:60754479 3.19E-54 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
101 PF00320 GATA 8.70E-17 CL0167 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g01062 - - csv:101209503 266.544