Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g01100 CTTTCTTTTTTTTTTTTTTTCCTTACACTCTCTCAACAACAAAAGAATATATTTGTTATGTGTGAAAAAAGAAAAAAAAAATCCTCCGATCCATCCCAATGGAAAAGAAATTTGAAGAAGACTCAATGATGGGGTTTGATTATAATTCTGCCGGACTTTACTCTCCGGCGGTGTTTTCCGATGAGTTTCCGGCGTCTAGTTTTGATTCTTTTTCTAGTATTTTCGACATGTCATGTGATGATCATGACCATAAAGCTGCTGTTGCTGCTGCTTCTTGTTCTTCTAATTCCTTTGACTTATTTAGTAGTGGAGTTGAAATCCATGATTTTTACAACAACAACAATAATACTTATTCTTCTTCTTTCTTCGATTTGCTTTCTACGGCGGCTCCGCCACTTTCCTCACCGGCCTCCACTGTGCCGGAATCCTCCGAGGTCGTCAATGCTCCGACCACTCCTAATTCTTCCTCTGTTTCTTCCTCCTCCAATGAAGCTGCTGCTGCCATTGAAGAAGTTGACAAGATCAACAACAACACTGATAAGTCTTCTTCTTCTAAAGTGTTGAAGCCAAACAAGAAGAACCAGAAGAAGAAAAGAGAACCCAGATTTGCTTTCATGACAAAGAGTGATATTGATCATCTCGATGATGGTTACCGGTGGCGAAAGTACGGTCAAAAAGCCGTGAAGAACAGCCCTTATCCCAGAAGCTATTATCGTTGTACAACAGCAGGGTGCGTTGTGAAGAAGAGAGTAGAGCGATCGTCGGACGACCATTCGATAGTCGTTACGACGTATGAAGGCCAACACACTCATCAAAGTCCGGTAATGCCGCGAGGGAGTATCAGAGTTCTACCGGAATCCACCAACAACAGCCTCATCGTCGATCACGACACCACCGCCACCAGACTTTTATTCCAACACAACACTCCCCAACAACCATTCATGTATAGCTCTCCACCACCGCCATTTCTAACAATCAACTCGTCGGTGGCGGCTGTGAGTCCCCATCCTCCTCCTCCTACTTCCTTCACACCACCATCACCGCCACCGTCGTCTCAAGCTTCCTTGGTCCGAGACCATGGGCTTCTCCAAGACTTGGTGCCATTGCAAATGAGGAAGGAACCAAAAGATGAGCAAAATGGATGAATTATTTGAATTAATTCTCTCTTAATTTTGGTACGTTTAAATTAAGAATTCAGAATCAGCCATTTTCCATCGTTTTTTTTTTTTTGAGTAGATTCGTCATCTCATGATTATGAAGCGCTTTCTCTCTTTCAAGCGTTTTAAAGATGGATTATATTAGTATTAGCTGTGCTTTATTAATGAGTTATATTATTATATTCTTTGTAAAATAATCTTAATTAGCATAT 1369 41.27 MEKKFEEDSMMGFDYNSAGLYSPAVFSDEFPASSFDSFSSIFDMSCDDHDHKAAVAAASCSSNSFDLFSSGVEIHDFYNNNNNTYSSSFFDLLSTAAPPLSSPASTVPESSEVVNAPTTPNSSSVSSSSNEAAAAIEEVDKINNNTDKSSSSKVLKPNKKNQKKKREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCVVKKRVERSSDDHSIVVTTYEGQHTHQSPVMPRGSIRVLPESTNNSLIVDHDTTATRLLFQHNTPQQPFMYSSPPPPFLTINSSVAAVSPHPPPPTSFTPPSPPPSSQASLVRDHGLLQDLVPLQMRKEPKDEQNG 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 20981951 20983747 + XM_039045031.1 Bhi01g01100 23873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g01100 348 MobiDBLite consensus disorder prediction 300 319 - -
Bhi01g01100 348 Pfam WRKY DNA -binding domain 182 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi01g01100 348 MobiDBLite consensus disorder prediction 101 169 - -
Bhi01g01100 348 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 63 335 - -
Bhi01g01100 348 MobiDBLite consensus disorder prediction 294 323 - -
Bhi01g01100 348 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 63 335 IPR044810 GO:0003700
Bhi01g01100 348 SMART WRKY_cls 181 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi01g01100 348 Gene3D WRKY domain 166 242 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi01g01100 348 SUPERFAMILY WRKY DNA-binding domain 173 241 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi01g01100 348 ProSiteProfiles WRKY domain profile. 176 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi01g01100 348 MobiDBLite consensus disorder prediction 101 133 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01100 Bhi-Chr1:20981951 Bhi04g01430 Bhi-Chr4:35954875 1.85E-45 dispersed
Bhi04g02450 Bhi-Chr4:66727719 Bhi01g01100 Bhi-Chr1:20981951 7.72E-31 dispersed
Bhi10g02311 Bhi-Chr10:59729087 Bhi01g01100 Bhi-Chr1:20981951 3.94E-32 dispersed
Bhi01g01100 Bhi-Chr1:20981951 Bhi05g02037 Bhi-Chr5:62389375 8.26E-47 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
104 PF03106 WRKY 7.30E-26 CL0274 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g01100 - - bhj:120088001 568.926