Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g01110 TGCTCCAAAAAAACGCAGCACCGGGCTGTCGTTTTGTCAACACAAAGTCTCATTAATAGCCTCCGCCTTTCTCCCAAGTTCCGACCAACAAACCGCCGGGAAATATCAACTTCCGATCACCGGAATTCTTCTTCTACTCCACTGTTCTTCCGCTTTCGAGCTCAAAAAAAGGATGCAATTTTAACGGCTGTTGCACATTGCAAATGCTTATCCTATCTCCCGAACCTTCTTGATGGAAGCTTGAAATAAGGAAGTTCCTTAGATGAAGTGGTATCTCTCAAACATATATAAGAGAGAAAAAAAAATGAAGAAGTGGTATGGAGGAACGTTAATACTAGCACTTGCCACAATCTTGGCTTTGCGTTATGGCCTTATGAATACCCAGCCTAAAAAGCAATCAGCGCGTGATTTTTTCAGAAATCATCCAACCAAAAATTCTCATAGTAGCAGCAACGAGTCTTTGGAATCTAAAGTAGCGAGAGCGTCAGAACCTGGACGACCTCATCTTATAAATGTTGAAGGACTCAGTGATCTAATCGCTCCAAATAATATTACTAAGCGAGAGTCAGAAGCTTTACTTCTGTGGTCGCACATGCATCTCCTGTTGTCGAGGTCTGATTTTTTACCCGAAACAATACAAGGGGTTAAAGAGGCTTCCATTGCATGGGGTGACTTATTGTCAGTTATTAAATCAGAAAAGACCATTAAAGTCGGTAATGGCAACAACTCGAAGCATGAAGTATGCCCTTCCTCTGTAAGCTCACCAGCCAAAATTTCACCTACTGGGGGAATTGTTCTTGAAATCCCTTGCGGTTTAGTTGAGGATTCTTCTATTACCCTCGTTGGCATACCTAATGGAGAGCAAGGGGGCTTCCGGATTGAACTGTTAGGCTCTCAGGCTTTCGGGGAGCCAAATCCCCCTATTATCTTGCATTACAATGTCAGTTTGCCCGGTGACAACATGTCTGACGAATCATTTATAGTTCAAAATACGTGGACTAATGAACAAAAGTGGGGCAAAGAGGAGAGGTGTCCAGCTCATCTGTCTGCAAGCTCTTATAAAGTTGATGGACTTGTTCTTTGTAACGAACGTGTTCTCAGAAGCACCAGAGCAGAAAATATCAGTATGCATCATGATAGTGGTGATACCAGCCTGACCAATATTTCCACAGGGCAAACTCATGAAAGTGCCAATTTTCCATTCATTGAGGGGAATTTGTTCACTGCAACATTATGGATTGGTTTGGAGGGATTCCATATGACTGTCAATGGAAGACATGAAACCTCATTCGAATATAGGGAGAAACTTGAACCATGCACAGTTAATCAAGTCAAGGTAGCGGGTGGTTTGGATCTTCTCTCTTCCTTGGCTAAAGGCCTACCAGTTTCTGAAGATCATGATTTTGTCAACTCTGAGCACCTTGGAGCTCCCCCTATCCCAAAGAGAAGACTTCTGATGTTGGTTGGGGTTTTTTCTACTGGAAACAATTTCAAGCGTCGCATGGCCTTGAGAAGGACTTGGATGCAGTATGAGGCTGTACGTAGTGGTGATGTAGCGGTCCGATTTTTCATAGGCTTTGATAAGAATGCACAAGTAAATTTGGAGCTTTGGAGAGAAGTGGAAGCTTATGGTGATATTCAGTTGATGCCGTTTGTTGATTATTACAGCTTGATCACTTTGAAAACAATTGCAATTTGCATGTTTGGGACCAAGATCCTTCCTGCAAAATATATCATGAAGACAGATGATGATGCATTTGTTAGAATTGATGAAGTTTTATCTGGAGTAAAAAGCAGGCCAGCTACTGGCTTACTGTATGGTCTTATTTCCTTTGATTCATCACCCCATAGAGATAAAGACAGCAAGTGGCATATCAGTGAGGAGGAATGGCCAAATGCGACATACCCTCCTTGGGCACACGGGCCAGGTTATGTCATATCACGAGATATTGCAAAATTCATCGTCCAAGGCCACCAGAATAGAAGCCTCAAGCTTTTTAAGCTTGAAGATGTTGCAATGGGCATATGGATTGAGCAATTCAGCAAGGGTGGGAAGGAGGTACAGTACATCAATGAAGAAAGATTTTACAACTCTGGCTGTGAATACAATTACATTTTGGCTCATTACCAAAGCCCAAGATTGGTTTTATGCCTTTGGGAAAAGCTGCAAAAACAGTTTGAACCTACTTGCTGTGATTAGTGTATATTTGGTAATGATGTGTTTGTTTGTGGAAATCATTTGAATTTATGGGTTTATGGTAGGAGATCAGAAGGCTTTTGAGATCAGTGAAATTGTTGGTTTTGTTTCATTTTTGGGACAGTGGCAGAGTTGTAACGTATGAAATTGAACACGTTTTTATAGAAATAGCTTACTTGTCATTTCGAGAAGAGATGAAAGAGATACTTGAACTTA 2413 41.48 MKWYLSNIYKREKKMKKWYGGTLILALATILALRYGLMNTQPKKQSARDFFRNHPTKNSHSSSNESLESKVARASEPGRPHLINVEGLSDLIAPNNITKRESEALLLWSHMHLLLSRSDFLPETIQGVKEASIAWGDLLSVIKSEKTIKVGNGNNSKHEVCPSSVSSPAKISPTGGIVLEIPCGLVEDSSITLVGIPNGEQGGFRIELLGSQAFGEPNPPIILHYNVSLPGDNMSDESFIVQNTWTNEQKWGKEERCPAHLSASSYKVDGLVLCNERVLRSTRAENISMHHDSGDTSLTNISTGQTHESANFPFIEGNLFTATLWIGLEGFHMTVNGRHETSFEYREKLEPCTVNQVKVAGGLDLLSSLAKGLPVSEDHDFVNSEHLGAPPIPKRRLLMLVGVFSTGNNFKRRMALRRTWMQYEAVRSGDVAVRFFIGFDKNAQVNLELWREVEAYGDIQLMPFVDYYSLITLKTIAICMFGTKILPAKYIMKTDDDAFVRIDEVLSGVKSRPATGLLYGLISFDSSPHRDKDSKWHISEEEWPNATYPPWAHGPGYVISRDIAKFIVQGHQNRSLKLFKLEDVAMGIWIEQFSKGGKEVQYINEERFYNSGCEYNYILAHYQSPRLVLCLWEKLQKQFEPTCCD 645
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 21470762 21475986 + XM_039022175.1 Bhi01g01110 23883

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g01110 645 Pfam Galactoside-binding lectin 178 367 IPR001079 GO:0030246
Bhi01g01110 645 PANTHER - 82 636 - -
Bhi01g01110 645 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 177 372 IPR001079 GO:0030246
Bhi01g01110 645 SMART Gal_bind_lectin_2 181 370 IPR001079 GO:0030246
Bhi01g01110 645 Pfam Galactosyltransferase 411 592 IPR002659 GO:0006486|GO:0016020|GO:0016758
Bhi01g01110 645 CDD GLECT 178 367 IPR001079 GO:0030246
Bhi01g01110 645 Gene3D - 395 627 - -
Bhi01g01110 645 SUPERFAMILY Concanavalin A-like lectins/glucanases 178 367 IPR013320 -
Bhi01g01110 645 MobiDBLite consensus disorder prediction 50 75 - -
Bhi01g01110 645 Gene3D - 169 368 - -
Bhi01g01110 645 MobiDBLite consensus disorder prediction 56 70 - -
Bhi01g01110 645 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 82 636 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g01110 K20843 GALT2S; hydroxyproline O-galactosyltransferase 2/3/4/5/6 [EC:2.4.1.-] - csv:101223060 1164.06
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01110 Bhi-Chr1:21470762 Bhi07g01561 Bhi-Chr7:44672453 0 dispersed
Bhi01g01110 Bhi-Chr1:21470762 Bhi01g01111 Bhi-Chr1:21470762 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g220 . . . . . Bpe14g01082 . . . . . . Car06g01342 . . Cpe08g00138 . Bhi01g01110 . . . Hepe05g1357 . Lcy11g1319 . . . . . . . . . . . Lsi05g01401 . . Cme06g00818 . . . . . . Bma02g00943 . . Cmo06g01573 . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011276 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 2 1 1 31