Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g01151 ACCCATTCAACTGACCTCGAGTTGGTGCCTCTAAATCTCTAGGTGGATAATGCATATTTCACGCGTATTTGGCGCCATTATCCTAACGAAGACAATGCAACTAAATAATCTGAGCTGATTCCGCGCAATCCTCTTCTAAGTTCTAACCGGTGGCAAAAACAACCGTAGAAGTATAGCAATTCGCTTCTTTCAGTTTCGGATTTTTTTTTTTTTTTTTTTTTTGCAATTCCATTGTTGCTTCCAAACCAATCCAAATCCCATTTGAAGAAGACGATAGATAGTGCTTATATTCAATCCACCACCTCTCCGCCGCCCGCCGGCAATGGCCAGAGCTCCCATCCACACGCCGGCCAACTTTCTGACCTCTCGAAGCCTTGAATCGTGCTACTTACGACGCCATGGCTGCCTCCGCTCGCCATTTCTGAGCCACTCGCTACGCCCAGTTCCCGCAAGCAAGTTGGTGATTGTTGGTGGTTGTGTAGTCGCCGGTTACGCTCGCAAATCGGTGGATTCTGTTGGAGTTTACCAGCTCACTGATGATGAGGACTTTACCGTTACTTCCTCGGAGGAATTGCGTCACGATGGAGATGAGACAGACGATGATGAAGGTATTGAGACTTCAGGGACACGTAGAAAGATATCTATTGGAAGTTTTGGAAGATTGAAAACTCAGAAAGTTAGGGCAATTGTGACGAAAGGCTCTAGGACGAAGGTAGAAATAAGAGATGATGTCCGTGTACCAACTCCTGGAGATGGGTCATCTCATATATCTGATCGTTCACACTCTAAAGTTAAAACTATGGGAGAAAAGAAGAGAGTAAATGCCTTGAGAAGTGTAGAAAAGTCAAGACCATCTGAACTGCAAGATAGAGATAGAGACAGAGATAGACAACACAGAACAGCCCCCAATTTATCTAGATCCGAGCCATTAGTTCCGGAAGGTTCTGCTGCTTACTTCCGAGGATGGGGCTCTAGAGGGCCCTATGGTTCTGAATATGAACCAACCGAGCCTAAACAACAGAAATTTTCCTCAGAGAAGGGCTTTTATAGCCGAAAGTCATTTAAAGATCTTGGGTGCTCTGAATATATGATTGAATCATTGAGGAAGCAGAATTTTGTACGGCCTTCACAGATTCAGGCCAAGGCATTTGCATCGGTTATTGAAGGAAAGAGTTGTATAATTTCTGATCAAAGTGGATCTGGTAAGACATTAGCATATCTTGCACCATTAATCCAGCGTTTGAGGCAGGAAGAAATTGAAGGACTTGAAAAATCTTCTTCACGAAGTCCCCAAATTGTTATCATTGTGCCGACTGCAGAATTGGCTTCTCAGGTCTTAAGTAATTGCCGATCCATTTCCAAATCTGGAGTGCCATTTAGGTCTATGGCCGTGACAGGTGGTTTCCGGCAGAAAACTCAACTTGAAAATCTACAAGAAGGTGTTGATGTTCTAATTGCAACTCCTGGTCGTTTGATGTTTCTAATAAATGAAGGCTTCTTGCTGTTATCAAATCTAAGATGTGCTGTAATGGACGAGGTAGATATCCTTTTTAATGATGAGGATTTTGAAGTTGTATTGCGGTCTTTAATGAAATCTGCACCTGTTAACACACAATATCTATTTGTGACTGCAACTTTACCAGTTGACATATACAATACATTAGTAGAAAATTTTCCTGATTGTGAAGTGATCATGGGACCTGGAGTTCACCGGATAAGTCCTAGCCTGGAAGAGGTTCTTGTAGATTGTAGTGGTGAAGATGAGCAGAACAAGACACCGGATGCTGCTTTCTTGAATAAGAAAGATGCCCTCTTGCAGATTGCTGAAGGAACTCCAGTCTCGAAAACTATTGTCTTCTGTAATAAGATTGAGACATGTAGAAGAGTTGAAAATGCATTGCAGCGTTTTGATAAAAAAGGTAGCCACTTGCAAGTATTTCCATTTCATGCTGCCCTAGCAAGAGAGTCACGGCTTGCAAATATGGAGGCATTCACTAGTTCTCGTTCTGACCAAGTATCCAAGTTCTTGGTTTGCACTGATAGGGCATCACGTGGAATTGATTTTCCAAATGTGGATCACGTCATACTCTTTGACTTCCCCCGTGATCCTAGCGAGTATGTTCGACGTGTTGGAAGAACTGCCAGAGGTGCTACAGGAAAAGGAAAAGCATTCATCTTCGTGGTTGGAAAGCAGGTGTCCCTTGCACGGAGGATAATTGAAAGAAACAGGAAGGGCCACCCGTTGCACGATGTGCCATCTGCTTATGAGCTTACATACTAAATAATGGCTTGTTAGAAGAAAGCAGATGCCATTACCGGAAGAGTTGCTGAATTACCAAGCTGGAAATTGAGCTTTAATGGAATGCAGTTGCCTCCCCTGCTATCAGATAATGAGGTTTTCTCCCCCTTTCCTTTTGTCTCTCATATTAAATTTCTGTTATATGCCAGCTTAGTCGTACTTCAGCCAACAAATTGTTCTAAGTCATTTATTTTACTTAAATATTTTGATAAAATACTCCAAATCGTTCTTACAGAAGACCTCTTTTCTCCGGAAGTGGCTACCAAAGGCTGTTAGGAAGAATTATCCATGTTTAACCTCTTGTTTATTTAAAATTTCGTTCAATCTTTCAAATGAATTGTTACAAGATTCTAGAATTGATTTTCCCCCTTTTTTTTTAGTTCAACAATTATGATGGTGGAAATCTAACATCGAACCATCAATTTTACAAGCGGGAATTGGTGTAGTAGATCCACTAATCATAATTGGCTTAGATATAGTTAATGTATGTACACAAAAGTAAATATAAATTGAATAGTTGAATTTTGGTATGAGCAATTGATTGGTTCATGTTATTATGATCGAAA 2865 41.15 MARAPIHTPANFLTSRSLESCYLRRHGCLRSPFLSHSLRPVPASKLVIVGGCVVAGYARKSVDSVGVYQLTDDEDFTVTSSEELRHDGDETDDDEGIETSGTRRKISIGSFGRLKTQKVRAIVTKGSRTKVEIRDDVRVPTPGDGSSHISDRSHSKVKTMGEKKRVNALRSVEKSRPSELQDRDRDRDRQHRTAPNLSRSEPLVPEGSAAYFRGWGSRGPYGSEYEPTEPKQQKFSSEKGFYSRKSFKDLGCSEYMIESLRKQNFVRPSQIQAKAFASVIEGKSCIISDQSGSGKTLAYLAPLIQRLRQEEIEGLEKSSSRSPQIVIIVPTAELASQVLSNCRSISKSGVPFRSMAVTGGFRQKTQLENLQEGVDVLIATPGRLMFLINEGFLLLSNLRCAVMDEVDILFNDEDFEVVLRSLMKSAPVNTQYLFVTATLPVDIYNTLVENFPDCEVIMGPGVHRISPSLEEVLVDCSGEDEQNKTPDAAFLNKKDALLQIAEGTPVSKTIVFCNKIETCRRVENALQRFDKKGSHLQVFPFHAALARESRLANMEAFTSSRSDQVSKFLVCTDRASRGIDFPNVDHVILFDFPRDPSEYVRRVGRTARGATGKGKAFIFVVGKQVSLARRIIERNRKGHPLHDVPSAYELTY 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 22561062 22571622 - XM_039038224.1 Bhi01g01151 23924

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g01151 652 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 245 273 IPR014014 GO:0003724
Bhi01g01151 652 MobiDBLite consensus disorder prediction 149 195 - -
Bhi01g01151 652 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 492 652 IPR001650 -
Bhi01g01151 652 SMART helicmild6 520 610 IPR001650 -
Bhi01g01151 652 Pfam Helicase conserved C-terminal domain 494 609 IPR001650 -
Bhi01g01151 652 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 276 457 IPR014001 -
Bhi01g01151 652 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 279 621 IPR027417 -
Bhi01g01151 652 MobiDBLite consensus disorder prediction 79 103 - -
Bhi01g01151 652 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 98 650 - -
Bhi01g01151 652 Gene3D - 466 643 IPR027417 -
Bhi01g01151 652 CDD DEADc 256 457 - -
Bhi01g01151 652 Gene3D - 221 457 IPR027417 -
Bhi01g01151 652 SMART ultradead3 264 472 IPR014001 -
Bhi01g01151 652 MobiDBLite consensus disorder prediction 133 203 - -
Bhi01g01151 652 Pfam DEAD/DEAH box helicase 270 443 IPR011545 GO:0003676|GO:0005524
Bhi01g01151 652 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 98 650 - -
Bhi01g01151 652 CDD SF2_C_DEAD 492 620 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g01151 K13179 DDX18, HAS1; ATP-dependent RNA helicase DDX18/HAS1 [EC:3.6.4.13] - csv:101214337 1105.51
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01151 Bhi-Chr1:22561062 Bhi09g01553 Bhi-Chr9:41828263 2.45E-54 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g288 . . . . . Bpe14g01079 . . . . . Cma14g01547 . Car14g01365 Sed02g1093 . Cpe03g01293 Bhi01g01151 Tan10g1142 Cmetu06g0925 . Hepe05g1330 . Lcy11g1291 . . . . . . . . . . . Lsi05g01373 . . Cme06g00846 Blo02g00460 . . Bda13g00235 . . . . . . Cmo14g01583 . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011458 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 2 1 1 31
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi01g01151 Bhi_Chr01 FPKM 10.292509 11.646123 10.490899 11.90361 6.424218 6.770992 6.139625 12.576177 12.619472 13.105295