Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g01167 ATCAACTCTTTTATAAGAAATTCCCTCTTGCCCCCACCAACAAGGAAGAGCATTATTGGAGAAGAATAATGGAGCATGGGAATTTCCTTCTAGTTTCCCAAAGCCCAAAGAGCCATCTCAACCCTACTCTCCATTTGGCCTCCACCCTCCTTTCCTTTGGCTCAAAAGTCACTCTTCTCCTCACCAACTCTGCCCTCAAAAACATCTCAAAAGACCAACTCCCTTATGGCTTGTCTCTCTCCACTTTCTCCGATGGCTTTGATGATGGTTTTACCTTCTCTGACTTCCCACGCTGGTGTTTCGAGTTCGAGCGCCTTGGTCGCCTTGCCCTCGTCAACCTCCTCTCCTCCTCCTTACAACAAGGCCTCCTTCCCTTCACTTGCATTGTCCACACCCTCCTCATCCCTTGGGTCGCTCGAGTCGCACGTGAGCTTCATGTGCCGACCGCGGTTTTATGGATTCAATCGGCCGCTGCCTTCGATGTGTATTACTATTACTTCAATGGCTATAGTGATGTGATTTGGAATGGTTATAAAGATGAGGGCTCTAACTCTTTGTTATTTAACATTTGGCTTCCGGGTTTGCCTTTGATGAATGTTTTGGACCTCCCAAGCTTTATGGTTTCTGATGATTATCATGGGCTTATTCTCAAGTCATTTCAAGAGAAGATGCAAGTTCTTGAGGAGGAGGAGAATGTCTCAATCCTTGTTAACTCGTTCGATGCGTTGGAACATGATGCCTTGAGCGCAATCGGGAAATTTAACTTGATCCCAGTTGGACCTTTGGTTTCACTCCCACTTGAATTTGAAGTTTCAACCAAACAACGAAGCACTTCATATTTTCAAGATGGCCAACAGGCTCAAGCGGATTATATCAAATGGCTCAACTCCAAACCTGATTCATCAGTGGTCTACATAGCATTTGGGAGCATTTCAAAGTTGTCAAATAAACAAACAAAAGAGATCGTTGGTGCATTATTAGAATGCAGTTACCCATTCTTGTGGGCCCTTCGCATGGATGACATCCAAGATGAGAATTTAAGCTCATATTTTGATGATGAACTACAAGCTCAAGGGAAGATAGTGCCATGGTGCTCACAGGTAGAGGTCTTGAGCCATCACTCCGTGGGTTGCTTTGTAACGCACTGCGGATGGAACTCGACGATCGAGAGCGTGGCGGCTGGAGTGCCGATGGTGGCATGGCCGTTGTGGGCAGACCAAGCCACCAATGCCAAGATGATGGAGGATGTATGGGAGATTGGTGTGAGAGTGAAGAAGAGTAGTGATGGTGAAGGAGTGGTTGAAGGGAAGGAGATTGCAAGGTGCTTGAGAACGGTTATGGATATGGAAGATTATGGCAAAGGAAGAGGAAAGCAACTGAGAATCAATGCTAGGAAGTGGCAGAGCTTAGCAATGGAGGCTGCAAATGGTTCTTCTTATATGAATCTTAAGGCTTTTGTAAATAAACTTAGTGATCAAGCAAACTGATTGGTGAATGATCAGCTTCTTTATGGTACTATGTAACAAACATTAGGATTAAAGCATATAATTATAAATAATATTAGCAAGACAATAGTAATACCTGTATCTCAGGTGGTATTACTATTGAGAAGACAAATGTCTACCCAAGTAAGCAAATCCAAGTAGGAAAAAAATTCACTAATAAGGCATACAACAATGGATCAATTCATTCAACAAGATCCATTTTTATTAGATTTGGATGAATTAGATTGGTCTGACCTCTTGCTCGAAT 1752 43.32 MEHGNFLLVSQSPKSHLNPTLHLASTLLSFGSKVTLLLTNSALKNISKDQLPYGLSLSTFSDGFDDGFTFSDFPRWCFEFERLGRLALVNLLSSSLQQGLLPFTCIVHTLLIPWVARVARELHVPTAVLWIQSAAAFDVYYYYFNGYSDVIWNGYKDEGSNSLLFNIWLPGLPLMNVLDLPSFMVSDDYHGLILKSFQEKMQVLEEEENVSILVNSFDALEHDALSAIGKFNLIPVGPLVSLPLEFEVSTKQRSTSYFQDGQQAQADYIKWLNSKPDSSVVYIAFGSISKLSNKQTKEIVGALLECSYPFLWALRMDDIQDENLSSYFDDELQAQGKIVPWCSQVEVLSHHSVGCFVTHCGWNSTIESVAAGVPMVAWPLWADQATNAKMMEDVWEIGVRVKKSSDGEGVVEGKEIARCLRTVMDMEDYGKGRGKQLRINARKWQSLAMEAANGSSYMNLKAFVNKLSDQAN 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 22888445 22890971 + XM_039036842.1 Bhi01g01167 23940

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g01167 472 ProSitePatterns UDP-glycosyltransferases signature. 341 384 IPR035595 -
Bhi01g01167 472 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 465 - -
Bhi01g01167 472 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 267 401 IPR002213 GO:0008194
Bhi01g01167 472 Gene3D Glycogen Phosphorylase B; 252 450 - -
Bhi01g01167 472 Gene3D Glycogen Phosphorylase B; 15 460 - -
Bhi01g01167 472 PANTHER UDP-GLYCOSYLTRANSFERASE 75D1 5 466 - -
Bhi01g01167 472 CDD GT1_Gtf-like 5 467 IPR002213 GO:0008194
Bhi01g01167 472 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 5 466 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g01167 - - - bhj:120081736 924.08
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01167 Bhi-Chr1:22888445 Bhi12g02119 Bhi-Chr12:65951892 6.54E-130 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1034 . . . . . . . . . . . . . . . . . Bhi01g01167 . . . . . Lcy11g1279 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi09g01620 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0014016 0 1 0 0 0 1 0 2 2 1 1 1 0 1 1 0 1 1 0 1 1 1 1 1 1 1 1 0 1 1 23
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi01g01167 Bhi_Chr01 FPKM 2.315291 1.811135 9.246707 10.105778 13.5108 10.77441 13.203863 9.344842 6.715906 9.014979