Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g01169 TCCGATCGAGAATCGGTCAAGATGTGGGTGGCTAAGCTTCAGGATTTAGCGCTCGATGCTGAAGTTGTACTGGACGAGCTCTCCTACGAGAATCTTAGGCGGGAAATGGACGTCAATGGAGATTCTAAGAAAAGGGCATGGGTGGTCTTGGAAAGACTACGGTGGCAAAAGCAGTCTTCAACCATGAGTTTGTGAAAGCACATTTTGATGAAACTATTTGGGTGTGTGTGACTGCGACTTTTGATGACAAGAAGATTTTAAGAGCAATTTTGGAATCTCTAACGAATGTTCCAAGTGGTTTGGATAGTATGGATGCTATACTTAGAAGGCTACAAAAGAAGCTGGAAGGGAAAAGGTATTTTCTTGTGCTGGATGATGTGTGGAATGAAAATGTTAAACTATGGAACAATTTGAAGAGTCTTCTGCTAAAGATTACAAATAGTATTGGGAACCGAGTTCTTGTGACAACTAGAAGTGAGGAAGCTGGAAAAATCATGGAGACATTTCCCATTTATCATTTAGAAAAGTTATCAGATGATGAATGCTGGTCAATATTCAAGGAAAGAGTATCTGCAAGTGGACTAACATTGATTCAAGAATTCGAAACTTTTAAGAATAAACTTGCAAAGCAGTTTGGAGGCATTCCATTGGTTGCAAAAGTCTTGGGAGGGGCTGCACTATTTACGCAAAGAACAGAGACTTGGTTAATGTCGACATTGGAAACCCTTGTAATGAATCCACTTCAAAATGAAAATGATGTTTTGTCTATTTTGAGATTAAGCGTGGATCATCTGCCAAACCCGTCATTGAAACAATGCTTTGCCTATTTTTCAAATTTTCCCAAGGGTTTTAACTTTGAAAAGGAACAACTAATCCAATTTTGGATGGCTGAAGGGTTCATTCAACCTTCTGATAAAGTAAGCCCTGAAACCATGGAAGATATAGGAGAGAAATACTTCAATATCTTGCTGGCTCGTTCCTTATTTCAAGATATTGTTAAAGATGAGAATGGTAAAATTACACACTTTAAGATGCATCATCTTCTACATGATCTTGCTTATTCTGTCTCAAAATGTGAAGCATTGGGATCAGATCTTATTGGTCTAGTTGACGATGTTCCTCGAATTCGGCAATTATCCTTGATTGGCTACGAGCAAAATGTAACTTTGCCCCCTAGAAGGAGCATGGAGAAGTTGCGTTCTCTATTTTTGGATAGAGATGTGTTTGGCCAGCAGATTTTAAATTTCAAGCATTTGCGTGTTCTGAACATGTCCCTATGTGAAATCCATTACTTACCAACTTCAATTGGAAGGTTAAAGCATCTAAGGTATCTTGATGTTTCAAATAATATGATAAAGAAACTTCCAAAATCTATTGTTAAGCTTTACAAATTGCAGACCTTGAGGCTTGGTTGTTTCTGTGGAGAATCCCCCAAGAAATTCAGAAAATTGATCAGCTTGAGACATTTCTATATGAATGTTAAAAGACCAACAACTCGGCACATGCCTTCATATTTAGGTAGGTTGGTTGATCTTCAGTCCATGCCTTTTTTTGTTGTTGGAACGAAGAAGGGTTCCCATATAGAAGAGCTTGGATACTTGAGAAATCTCAGAGGTAAATTAAAGCTTTACAATCTTGAATTAGTAAGAAATAAGGAGGAAGCCATGGGGGCAGAGTTGGTGAAAAAAGATAAGGTATACAAATTGAAACTGGTATGGAATGATCAAAGAGAAGTTAATGATAACCATGACATTTCTGTTTTAGAAGGACTTCAACCACACAGAAATCTTCAATACTTGACAGTTGAAGCCTTTATGGGAGAACTTTTACCAAATCTTACTTTTGTTGAAAATTTGGTGAAGATTTCTCTAAAAAATTGCAGCCGATGTTGTAGAATTCCAACATTAGGACATTTGCCCAATCTTAAGGTTCTTGAGATTTATGGATTACACAATCTAAAACGTATAGGGATGGAATTCTATGGGAATGAATATGAATCGAGAAATTTGTTTCCAAAACTGAAAAGATTTCATCTTTTAGACATGGAGAATCTAGTACGTTGGGATGAAGCAGCAGTGCCATCAGAAGTTGCAGTTTTTCCTTGCCTTGAAGAGTTGAAAATTCTCGACTGTCCTAGATTGGAAATTGCTCCCGATTACTTCTCAACTCTCAGGACATTAGAAATTGATGATGTCAACAATCCAATTTCGCAGATTACTCTTCAGACATTTAAGCTACTTGGCATTATACACTCTGGCAACCTGAGTGGTTTGCCCGAGGAGCTACGTGGTAATCTTTCATCTCTTGAGGAGTTTAAGGTTTGGTATTACCTTCACTTGAAATCCTTTCCAACCATTGAGTGGCTCACTGATATTCTGAAATGCAAGATCGGATTTGACACAAGATGGATAAATATACAATCTCATGAGCTAGAATCATACACTTCTGTGAATGAATTATCTATTACTGGCCACCCTGACCTCATATCAACCCCAGATATAAAAGCATTTTATAATCTTTCGTCTTTAACAATTAGTGGCTTAAAGAATTTGCCAAAAGGATTTCACTGCCTCACTTGCCTGAAAAGTTTGTCAGTTGGAGGATTCATGGAGGGGTTTGATTTTAGGCCTCTTTTGCATCTCAAGTCTCTTGAAAATCTTGCAATGATAGACTTTGGTAGTACAGAAAGCACACTTCCTGACGAGCTTCAACACCTAACTGGCTTAAAGCACTTGAAAATTGTTGGATTTCAAGGCATTGAATCTCTGCCAGAGTGGTTAGGAAATCTTACCTCATTGGAAAGTTTGCACCTTGAGGGTTGCAGAAAATTGAGAGAGCTTCCAGAAGCCATGAGATGCCTCGCCAAATTGGAGGAACTGCACAGTTTCAATTGCCAAGAGCTGAGGCTTCGCCAAGAAGAGCCAGAATGGGATAAAATTTCTCACATTCCAAGATTCATATCATTCAATTATTGGGTTGATGAGAACCAACAAAGGATTCAGTTCAAAGTCTGCCACAAACCTAGCTAATGACCAATTGTCATGAATGAAGCATGGGCAACAGTACATTTTGAACTGATTAATTGAAGCAATGAAGCACATACAAAGTCTTTATACTGATTAATTGAACCAACGGACCATTGGACATGGAAACTCAACTATACTGGTTTCAATACAAAGTCTTTATACTCTTCCCTCATGTCCAACCCGCACTCATCTTCGGCCATCTTTTGCAGAAAATTGTGGAGTTGTCCTTGCCCGAAGAGAGTTAAATTCTTCCTTTGGAAAATCACAAATTCATGTCTAAACACTATGGACAGGTTATAGAAACGTTACCCATGGATCAACTTATCTCCCTCCTGGTGCAGCCTTTGTCGAATAAACAATGAAACTGTTTAGCATGTTTTCTTTGGCTCCCCCTTTTCTAGAGGGATATGGATGGAAGTTTTTTCTGCCTTCGACTGGTCTGTGGCTTTTCCAAATGACTTATAAAGTTGGCTTCACCTACTAATTAGTTAGACTCCTTTCAAAGTTGTCAAAGAATGTCTCTGGTTAAGCATCATTTGTGCTGTTTTGTGAAAGATATGAGATGAAAGAAATGCTAGAATCTTCCAAGACAAGGCCAAGACAACAAAGGACATTCTTGATACCATCATTTACAATGCTTTTTTTGTGTGCAAAGATTTACAGGCTATACACAGTCATAGTTTTTCTTGTTGCAAATTGGAAACACCTTTTGCAATCCCTATGAATGGGTTTTTTTGTATACCCTATGATTGGGGTCCTCATGTACCTTTAGATATCTTTGGATATTTCATTTAATCAATGAAATTGTTTCTTATAAAAGAGAAAAAAAAAAGCAACAAAACACTTACATCA 3878 37.85 MGGLGKTTVAKAVFNHEFVKAHFDETIWVCVTATFDDKKILRAILESLTNVPSGLDSMDAILRRLQKKLEGKRYFLVLDDVWNENVKLWNNLKSLLLKITNSIGNRVLVTTRSEEAGKIMETFPIYHLEKLSDDECWSIFKERVSASGLTLIQEFETFKNKLAKQFGGIPLVAKVLGGAALFTQRTETWLMSTLETLVMNPLQNENDVLSILRLSVDHLPNPSLKQCFAYFSNFPKGFNFEKEQLIQFWMAEGFIQPSDKVSPETMEDIGEKYFNILLARSLFQDIVKDENGKITHFKMHHLLHDLAYSVSKCEALGSDLIGLVDDVPRIRQLSLIGYEQNVTLPPRRSMEKLRSLFLDRDVFGQQILNFKHLRVLNMSLCEIHYLPTSIGRLKHLRYLDVSNNMIKKLPKSIVKLYKLQTLRLGCFCGESPKKFRKLISLRHFYMNVKRPTTRHMPSYLGRLVDLQSMPFFVVGTKKGSHIEELGYLRNLRGKLKLYNLELVRNKEEAMGAELVKKDKVYKLKLVWNDQREVNDNHDISVLEGLQPHRNLQYLTVEAFMGELLPNLTFVENLVKISLKNCSRCCRIPTLGHLPNLKVLEIYGLHNLKRIGMEFYGNEYESRNLFPKLKRFHLLDMENLVRWDEAAVPSEVAVFPCLEELKILDCPRLEIAPDYFSTLRTLEIDDVNNPISQITLQTFKLLGIIHSGNLSGLPEELRGNLSSLEEFKVWYYLHLKSFPTIEWLTDILKCKIGFDTRWINIQSHELESYTSVNELSITGHPDLISTPDIKAFYNLSSLTISGLKNLPKGFHCLTCLKSLSVGGFMEGFDFRPLLHLKSLENLAMIDFGSTESTLPDELQHLTGLKHLKIVGFQGIESLPEWLGNLTSLESLHLEGCRKLRELPEAMRCLAKLEELHSFNCQELRLRQEEPEWDKISHIPRFISFNYWVDENQQRIQFKVCHKPS 963
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 22891829 22897003 - XM_039036832.1 Bhi01g01169 23942

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g01169 963 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 230 IPR027417 -
Bhi01g01169 963 SUPERFAMILY L domain-like 703 923 - -
Bhi01g01169 963 Gene3D Ribonuclease Inhibitor 698 946 IPR032675 -
Bhi01g01169 963 PRINTS Disease resistance protein signature 68 82 - -
Bhi01g01169 963 PRINTS Disease resistance protein signature 166 180 - -
Bhi01g01169 963 PRINTS Disease resistance protein signature 591 607 - -
Bhi01g01169 963 ProSiteProfiles Leucine-rich repeat profile. 395 416 IPR001611 GO:0005515
Bhi01g01169 963 PANTHER DISEASE RESISTANCE PROTEIN RP 1 803 IPR044974 GO:0006952
Bhi01g01169 963 Coils Coil 488 508 - -
Bhi01g01169 963 Pfam NB-ARC domain 1 217 IPR002182 GO:0043531
Bhi01g01169 963 Gene3D - 211 309 IPR036388 -
Bhi01g01169 963 PANTHER NBS-LRR TYPE DISEASE RESISTANCE PROTEIN 1 803 - -
Bhi01g01169 963 SUPERFAMILY L domain-like 298 682 - -
Bhi01g01169 963 Gene3D - 1 123 IPR027417 -
Bhi01g01169 963 Gene3D Ribonuclease Inhibitor 330 467 IPR032675 -
Bhi01g01169 963 Gene3D Ribonuclease Inhibitor 475 697 IPR032675 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g01169 - - - csv:101215544 1718.75
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01169 Bhi-Chr1:22891829 Bhi01g02661 Bhi-Chr1:66237501 0 dispersed
Bhi01g01168 Bhi-Chr1:22891829 Bhi01g01169 Bhi-Chr1:22891829 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1255 . . . . . . Bma04g00863 . . . . . . . Sed02g1078 . . Bhi01g01169 Tan10g1170 Cmetu09g1097 . Hepe05g1313 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000049 1 17 1 1 1 9 0 11 8 28 9 10 9 18 20 10 9 0 0 9 17 7 7 28 33 20 21 14 7 0 325
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi01g01169 Bhi_Chr01 FPKM 1.586263 1.787823 2.968986 3.386658 5.822501 4.985291 6.099368 3.41772 4.048892 4.172478