Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g01245 TCCCAGTTTATTTATTTATTTCTCTTGCTTTTCCTTTAAACCCAAAAATTCCATGATTTCTGTATTCAAATTTCAAACACAAAGATTTTGTTTTTATTATTTCTCCGTAATTATTGCCATTTCTTGCAAATAATTTTTTTTTCCTGGAATTCCTGCTGCACTGTTGAAGCTCTGTGCAGTGACTACAATGGCGGAAAGTCAAGCTTCAGAATTCTGTTCACTACAGTCCAAACATAAAGCTTCTTCTTGTGTTCATCTTGTAGCATTTCAAAAACTTGATTGTTGAATTTTTCAGTTTTGTTTTGGAAATTAAGGCAGCCATTTCTGCTCCAATTCTGCTTGAAATTTCTTCTTTATCTTTGCGATTCTACTAGCTCCCATTTCGAAGCTCATCATCCTATTTAAGATTTTTTTTTTTTAATAAAAAGTTCAAAACTCTTAAATTATAGGGTTTTAAGTTTCTGAGTACTTCACTTAAGCTGTAGCTATGAAGGAGGTAGAAACCGGAGTTTCTAGGTTTACAGTTACGAATGATGAAGCCCTAGACAGCTTCCAGTTAGCTCCAAGAACAGAAGCCCTAAAATCAACCGGTGAGTCTAAAGTGACGGAGCTCGCGGCAGCTGCTCCACCACCAGGGTTTACAGCGGCGGCTGATACACCACCGGCGAGTTTAGCGGTTTCTAGTACTGAAACAAAGAAGAAGAGAGGGAGGCCGAGAAAGTACGGACCGGATGGGAAGCGGTCACTGACATTAGCGTTGTCTCCGATGCCGATATCGTCGTCAATTCCACTGACTGGAGAATTCCCGAATTGGAAACGAGATAACGAGATTTCTCAACCGATAGTTAAGAAGCCGCAGAGATTTGAGTTTGAGAATCCCGGTCAGAGACTTGCATACTCTGTTGGTGCAAATTTTACTCCCCATGTGATCACTGTCAATGCTGGAGAGGACATTACAATGAAGGTTATGTCTTTCTCTCAACAAGAATCCCGAGCTATTTGCATTCTTTCTGCAAATGGTACAATTTCAAATGTTACACTTCGACAGGCAACTTCTTCCGGAGGTACCTTAACGTATGAGGGACGTTTTGAAATACTTGCATTGACTGGATCATATATGCCCACACAGAATGGAGCTACGAAGAGCAGATGTGGTGGGATGAGCGTCTCACTAGCAGGTCAAGATGGACGAGTCGTTGGCGGTGGACTTGCTGGTTTGTTGGTAGCTGCTGGTCCTGTGCAAGTTGTGGTCGGCAGTTTCCTTCCAGGTCACCAGCAAGAACAAAAGCCAAAAAAGCCTAGAAATGAGTCCACAACCATTTTCTTTCCTCCCGTCAACACCATCACCGGTGAAGAAATGAAGGCAATGTACGCTGGTGGTAACAAACCTATTCTCACGACGACGTCCTATCAAGAACATAATCCACCATCCCCTAGCCCGGTGACAGGCTTCAAAATCTCCTCCACTGACAACTTACCTCTATCTGATCAAGAACCAAAAACACAAAGTCAATCAAACTCTAATAAGCGAGCAGCATAGTGGAGTCTCGAAGATAGACGATATGAATGAGCTCAGATTGTAGCAGCTTCAAAGACCTCTCTCTCGACTTTAGCAGCGACAAAATCTTTTAGATGTGTAAAAGATTTGAGAAACATTGTTTTCCACTTTCATTACCATGTGTTTTTTGTATCAGAACATTGTTGTATTTGAGTGAAAATCATTTCAATGTTTCA 1734 41.35 MKEVETGVSRFTVTNDEALDSFQLAPRTEALKSTGESKVTELAAAAPPPGFTAAADTPPASLAVSSTETKKKRGRPRKYGPDGKRSLTLALSPMPISSSIPLTGEFPNWKRDNEISQPIVKKPQRFEFENPGQRLAYSVGANFTPHVITVNAGEDITMKVMSFSQQESRAICILSANGTISNVTLRQATSSGGTLTYEGRFEILALTGSYMPTQNGATKSRCGGMSVSLAGQDGRVVGGGLAGLLVAAGPVQVVVGSFLPGHQQEQKPKKPRNESTTIFFPPVNTITGEEMKAMYAGGNKPILTTTSYQEHNPPSPSPVTGFKISSTDNLPLSDQEPKTQSQSNSNKRAA 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 25459542 25464709 - XM_039024818.1 Bhi01g01245 24018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g01245 350 MobiDBLite consensus disorder prediction 304 350 - -
Bhi01g01245 350 ProSiteProfiles PPC domain profile profile. 140 283 IPR005175 -
Bhi01g01245 350 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 8 329 IPR039605 GO:0003680
Bhi01g01245 350 MobiDBLite consensus disorder prediction 262 282 - -
Bhi01g01245 350 Pfam Plants and Prokaryotes Conserved (PCC) domain 145 258 IPR005175 -
Bhi01g01245 350 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 8 329 - -
Bhi01g01245 350 SUPERFAMILY AF0104/ALDC/Ptd012-like 142 264 - -
Bhi01g01245 350 MobiDBLite consensus disorder prediction 46 87 - -
Bhi01g01245 350 Gene3D - 145 274 - -
Bhi01g01245 350 CDD DUF296 144 258 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00266 Bhi-Chr1:5009724 Bhi01g01245 Bhi-Chr1:25459542 2.11E-92 dispersed
Bhi01g01245 Bhi-Chr1:25459542 Bhi07g00033 Bhi-Chr7:2121313 1.31E-72 dispersed
Bhi01g01245 Bhi-Chr1:25459542 Bhi01g01246 Bhi-Chr1:25459542 0 tandem
Bhi03g01481 Bhi-Chr3:31715629 Bhi01g01245 Bhi-Chr1:25459542 2.77E-15 transposed
Bhi05g00553 Bhi-Chr5:13575859 Bhi01g01245 Bhi-Chr1:25459542 5.15E-50 transposed
Bhi06g01822 Bhi-Chr6:51082587 Bhi01g01245 Bhi-Chr1:25459542 7.31E-44 transposed
Bhi12g00573 Bhi-Chr12:18064211 Bhi01g01245 Bhi-Chr1:25459542 7.88E-111 transposed
Bhi01g01245 Bhi-Chr1:25459542 Bhi12g00362 Bhi-Chr12:11552692 1.10E-84 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g01245 - - csv:101217222 587.03