Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g01310 CCAAACACAAACACAAACACTCTTCTTCTTCTTCTCTCTAATTACATTTTTCACTTTCCACTTCCAATTCCAATGCACCGTCGCTAATCGCCGGCGACGCCTCAACATGAGTCCACCCGCCGTCGAAGCTCCGTTACTGTTTCTCATTCTGCTTGCTGCAGCGCTACGGTGCCCGCTCGCCGGAGCGCGCCTTCTGGTGGAGATGACGGTGGTTCGAAACGCCTCTTCCATCGGAGCCTTTTGTTTGGATGGGAGCTTGCCGGCGTATCACCTGGACAGAGGATTCGGCGCCGGAGCGGGAAACTGGCTTTTACAGTTCGAGGGTGGTGGGTGGTGCAATGATGTGAAGTCTTGTTTGGAGAGAGCGAATAGTCGAAGAGGATCAACCCGTTTGATGACCAAATGGGAAGACTTCTCTGGCATTCTTAGCAACAATGCTTCTCTTAACCCAGACTTTTATAACTGGAACCGTGTGAAACTCAGGTATTGTGATGGAGCATCATTTGCAGGAGATGCCTTGTTTGACAATGGGACATCACTGCTTTATTTCAAAGGGCAAAAGATATGGGAATCCATCATTCTAGACCTTCTACCAAATGGGTTGGGGACAGCAAGGAAGGCTCTGCTCTCTGGTTGCTCTGCTGGAGGATTAGCAGCTTTTCTGCATTGTGAAAATTTCAGCAAGTATTTGCCAAGGAATGCCAGTGTCAAATGCTTGAGTGATGCTGGATTTTTTCTTGACTTAAGAGACATAGGTTTGAACCACACAATGAGGAACTTTTACAAGGATCTTGTGGCTCTTCAGGGGATGGAGCAAAATTTGAATGAAAACTGCAAAGCCTCCTCTTACTTTCCAGAATTGTGTATATTCCCTCAGCATTCATTGAAGTACATAACAACACCCTTTTTCATTCTGAATTCAGCATATGATGTTTTCCAATTTCATCATGGATTGGTGCCACCATCTGCTGATTTACATGGACACTGGAACCACTGCAAATTCAATCCAGCAGAGTGCAGTGAACTACAGATTCAGAGGAGGAATGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAGTCACAAGACACATGGTTTGCAGATGACTCCCCAACAATAGACAACAAGACTATAGCAGAAGCAGTTGGAGATTGGTACTTTAGCAGAAGAAACATAAAGGAAATTGATTGTGCTTATCCATGTGACTCTACTTGCCATAATATTAT 1228 44.87 MSPPAVEAPLLFLILLAAALRCPLAGARLLVEMTVVRNASSIGAFCLDGSLPAYHLDRGFGAGAGNWLLQFEGGGWCNDVKSCLERANSRRGSTRLMTKWEDFSGILSNNASLNPDFYNWNRVKLRYCDGASFAGDALFDNGTSLLYFKGQKIWESIILDLLPNGLGTARKALLSGCSAGGLAAFLHCENFSKYLPRNASVKCLSDAGFFLDLRDIGLNHTMRNFYKDLVALQGMEQNLNENCKASSYFPELCIFPQHSLKYITTPFFILNSAYDVFQFHHGLVPPSADLHGHWNHCKFNPAECSELQIQRRNVHKFMFCSLPK 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 26316892 26330471 + XM_039020725.1 Bhi01g01310 24083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g01310 324 PANTHER NOTUM-RELATED 27 310 IPR004963 GO:0016787
Bhi01g01310 324 Pfam Pectinacetylesterase 28 311 IPR004963 GO:0016787
Bhi01g01310 324 PANTHER PECTIN ACETYLESTERASE 9 27 310 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01308 Bhi-Chr1:26316892 Bhi01g01310 Bhi-Chr1:26316892 0 dispersed
Bhi01g01310 Bhi-Chr1:26316892 Bhi01g02999 Bhi-Chr1:74672899 8.40E-103 dispersed
Bhi01g01309 Bhi-Chr1:26316892 Bhi01g01310 Bhi-Chr1:26316892 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g01310 K19882 - csv:101216160 605.905