Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g01348 AAGAAGGACAATGGGTGCTTTTTGTTTTCTCTGTCTTTGATCTTTACTATGTAAAAAATCGTGGTGTACAGTGTGAATATGAGAACAGAGACGAAAACAAAAGCTTGAAACTTTAACCTCTTCCTTTGGCCTTTTGTCTTCCTTTGTCTTCTTGTTAGGTTCTTTCTGTTTTTCTCAGTCTGACAAATATGGGGTCAAGTATTTTGAATATTAGGGTTATGTTTCATACTGTATTAGCCTTCTTTGGCTGATTTCTTATTTACGTTTTTTCTTGGTAGATAGAGATAGAGATAAGAGTGAGATATGAACTGGAAGGAAACGATGAAAAAAAGGAGTTTTCTTGTCTCATTCCTTTTGGTTTTTGTACTGTTCTGCAACTGATTTTCTGGACGGAGAAAGTGTTCAAAAGATAAAGACAGGGAAGGTGAAAAAAGTCATGATTCATGCATGGGCGTTGACGAGGAAAAAGCTTTGAACTTTCTGTTTTCTATTGAGAAATGTAGACTTTTCTGTCAGGTTTTTTTGCTCAATATGTCATTGCTTTGTTATAGTCAAACCCAGAAATCAACTAGACGGTTACTTATATCTCTTAGAACTCCCATTTTTTAAGCCTTTAACCCTTTTAAGCAAACGTGGATTCCCTCAAATTCAGAGGCGCCACAGAATTTGCTTACCTAATCAAAACAAAAAAATTGTGTAATCTGTTGAATTTTGGTGGTTTGAGCCGTGGCTTATACAACCTCATCATGCCTAGTGGTGCAATTACTGACCAGAGCTTTCTAGCTTACCCAATTCCCAGTTCAATGCCCAGCTCCTCTGAATTCTCCAGTTCCTTAAGGAAAATGGATGGTTTTGGAGAAGTTTGTCTACTTGGAGATGGCTTTGATCCGACCGGAATTGTGAGGATAAGGGAAGATGAATATGATAGCAGATCAGGCAGCGACAACATTGATGGTGCTGTATCTGGGGATGATCAAGATGCTAATGATGAACAACCACCAAAAAGGAAGAAGTACCATAGGCATACTCCCCATCAGATCCAAGAGCTTGAGATTTTCTTCAAGGAGTGTCCTCATCCTGATGATAAACAAAGAAGTGAGCTCAGTAGGAGGCTTGGTTTGGAGACAAAGCAAGTGAAGTTTTGGTTTCAAAATCGTCGAACACAAATGAAGGCGCAAATAGAACGACATGAGAATGCAATTCTTAAGCAAGAAAACGATAAGCTCCGGGCCGAGAATAGTGTGATGAAGGATGCTATTTCTAATCCAACGTGTAATACTTGTGGTGGCCCTTCAATTCCTGTTCATTTATCATTTGAAGAACACCAGCTTAGGATTGAGAATGCCAGATTAAGAGATGAACTGCACCGGTTATATGCTGTCACCAATAAATTCTTGGGCTGGCCGGTCTTGCCCTTCAATCATGGCTCTTCCCCAAGTTCTGACTCTTGCTTGGAACTTTCTGTAGGAAGAAATGGAATTGGAAATTTGAATACTATTTCTGATTCTATGGGCCTTAACTTGGGAAATGAACTTTTCAGTGCTGGCCCTGTGATGCCTATTAGTAAGCCTGAAATAGGCATGCTAAGTAATGATATACCACTTGAGAGAACAATATATGTGGATCTTGCTTTGGCAGCTATGAATGAATTGGTTAAGATGGCTCAAATGGATGATCCCCTTTGGATCAGAACTCGGGATGACAGTGGCAAAGAGACATTGAATCTTCATGAATATTCAAGGACATTTCCTTCTTCGGCTGGTATGAAACATAGTAATTGGACAACCGAGGCGACCAGAGATACAACAATGGTCATCATCAACAGCTTGGCACTTGTTGAGACATTGATGGACGCAAATCGATGGGCAGAAATGTTTCCTTGCTTGATTGCTAGAGCTACGACAGTCGATGTGATATCAAGTGGCATGGGTGGAACCAGAAATGGTGCATTACAATTGATGCATGCTGAACTCCGAGTACTTTCCCCACTTGTTCCAGCTCGTACATTTAAGTTCCTCCGCTTCTGCAAGCAGCATGCTGATGGTCTATGGGCTGTAGTTGATGTTTCCATTGGAGAAGGTTCAAATTCAAACTCGTTTTTCAGTTGCAGGAGGCTCCCTTCGGGCTGTGTTGTGCAAGATATGCCTAATGGTTTCTCTAAGGTTACATGGGTGGAACATACAGAATATGATGAGACTGTTATACACCAGCTTTACCGCCAGTTAATTAGTTCGGGCAGCGGCTTTGGTTCACAACGGTGGCTTGCTACCCTTCAAAGACAATGTGACTGTTTGGCAATTCTCATGTCTTCTACGATCCCCACTGAAGATCCTGCAGGAATATCGCCATGCGGTAGGAGAAGTCTGCTGAAGCTATCGCAACGTATGGTGGATAACTTCTGTTCTGGGGTTTGTAGTTCGACTTTGCATAAGTGGGACAAGCTTGTTGTAGGCAATATTAGTGAAGATGTAAAAGTGATGGCTAGAAAGAGCATCAACGAACCCGGCGAGCCACCCGGTATCGTGTTGAGTGCTGCAACTTCGGTTTGGATGCCAGTAACCCAGCAGAGGTTGTTTGCATTCTTGCAAGATGAGTGCTTACGGAGTGAGTGGGATATTTTATCCAACAGCCGGCCAATGCTAGAGATGCTCCGCATCTCAAAAGGCCAGGGACCGGATAACCGTGTTTCTCTCCTGCGTGCTAATCCCATGAACGCTGATGAGAGCACAATGTTCATATTGCAAGAGACTTGGACAGATATATCAGGATCACTGGTCGTTTACGCTCCAGTCGACACTTCGTCAGTTAATTTGGTGATGCGCGGAGGAGATTCTGCTTATGTATCACTTTTACCATCAGGATTTGCAATTCTCCCTAATGGTCTATCCAACTATGCTTGTACAAACAACGACCGAAATGCATCGATCAAGTCAAGTGTTAACAGTGGCCATGGTGGTGGATGTCTCCTCACAGTTGCATTCCAGATTTTGGTGAACAACCTTCCAACGGCCAAACTCACCGTCGAGTCAGTTGAGACAGTTAACAATCTCATTTCTTGCACCATCCAAAAGATCAAAACTGCTCTTCAAGTATCATAACGATACTTGCTCAGTAAGCTTTTGTTGTCTTTTTTTAATTCTCTTTTGTCAGAAAGGTACAGGGTAAGCTCATGTGCAAAGCTTATGTGAAAATTCATAGAACTAACGTGAAAAGAGCTCGAGTAGAGGACGTCAATACATAGGTTACTAGTCAAGAACGAACCGCAAATACTAGATTTCGTATCAGGTTCATACAAGTTTGTAACGTTGTGATTGTCATGTGGGTGGTTCGGTTCGGGTATTGACTCGATGACCAGTGAGGAGAACTGATTTGTGTGTTTGTCTTGAGTTGTTTTCTTTTTGTGTTATGAAACTTTTTGTGATGTA 3425 41.81 MPSGAITDQSFLAYPIPSSMPSSSEFSSSLRKMDGFGEVCLLGDGFDPTGIVRIREDEYDSRSGSDNIDGAVSGDDQDANDEQPPKRKKYHRHTPHQIQELEIFFKECPHPDDKQRSELSRRLGLETKQVKFWFQNRRTQMKAQIERHENAILKQENDKLRAENSVMKDAISNPTCNTCGGPSIPVHLSFEEHQLRIENARLRDELHRLYAVTNKFLGWPVLPFNHGSSPSSDSCLELSVGRNGIGNLNTISDSMGLNLGNELFSAGPVMPISKPEIGMLSNDIPLERTIYVDLALAAMNELVKMAQMDDPLWIRTRDDSGKETLNLHEYSRTFPSSAGMKHSNWTTEATRDTTMVIINSLALVETLMDANRWAEMFPCLIARATTVDVISSGMGGTRNGALQLMHAELRVLSPLVPARTFKFLRFCKQHADGLWAVVDVSIGEGSNSNSFFSCRRLPSGCVVQDMPNGFSKVTWVEHTEYDETVIHQLYRQLISSGSGFGSQRWLATLQRQCDCLAILMSSTIPTEDPAGISPCGRRSLLKLSQRMVDNFCSGVCSSTLHKWDKLVVGNISEDVKVMARKSINEPGEPPGIVLSAATSVWMPVTQQRLFAFLQDECLRSEWDILSNSRPMLEMLRISKGQGPDNRVSLLRANPMNADESTMFILQETWTDISGSLVVYAPVDTSSVNLVMRGGDSAYVSLLPSGFAILPNGLSNYACTNNDRNASIKSSVNSGHGGGCLLTVAFQILVNNLPTAKLTVESVETVNNLISCTIQKIKTALQVS 783
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 27104562 27110259 - XM_039029966.1 Bhi01g01348 24121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g01348 783 CDD START_ArGLABRA2_like 293 513 - -
Bhi01g01348 783 SUPERFAMILY Bet v1-like 544 777 - -
Bhi01g01348 783 SUPERFAMILY Bet v1-like 285 515 - -
Bhi01g01348 783 SMART HOX_1 86 148 IPR001356 GO:0003677
Bhi01g01348 783 ProSiteProfiles START domain profile. 284 518 IPR002913 GO:0008289
Bhi01g01348 783 Pfam START domain 294 514 IPR002913 GO:0008289
Bhi01g01348 783 ProSitePatterns 'Homeobox' domain signature. 119 142 IPR017970 GO:0000981|GO:0006355
Bhi01g01348 783 Gene3D - 73 160 - -
Bhi01g01348 783 MobiDBLite consensus disorder prediction 57 94 - -
Bhi01g01348 783 SMART START_1 293 515 IPR002913 GO:0008289
Bhi01g01348 783 ProSiteProfiles 'Homeobox' domain profile. 84 144 IPR001356 GO:0003677
Bhi01g01348 783 Coils Coil 138 170 - -
Bhi01g01348 783 SUPERFAMILY Homeodomain-like 71 143 IPR009057 -
Bhi01g01348 783 Pfam Homeodomain 87 142 IPR001356 GO:0003677
Bhi01g01348 783 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 42 781 IPR042160 -
Bhi01g01348 783 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 42 781 - -
Bhi01g01348 783 CDD homeodomain 87 144 IPR001356 GO:0003677
Bhi01g01348 783 Gene3D - 291 500 IPR023393 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01346 Bhi-Chr1:27104562 Bhi01g01348 Bhi-Chr1:27104562 0 dispersed
Bhi01g01348 Bhi-Chr1:27104562 Bhi01g01350 Bhi-Chr1:27104562 0 dispersed
Bhi10g01447 Bhi-Chr10:34590065 Bhi01g01348 Bhi-Chr1:27104562 0 dispersed
Bhi10g01448 Bhi-Chr10:34590065 Bhi01g01348 Bhi-Chr1:27104562 0 dispersed
Bhi01g01347 Bhi-Chr1:27104562 Bhi01g01348 Bhi-Chr1:27104562 0 tandem
Bhi01g01348 Bhi-Chr1:27104562 Bhi01g01349 Bhi-Chr1:27104562 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
127 PF01852 START 1.30E-48 CL0209 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g01348 K09338 - csv:101218216 1454.88