Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g01350 AAAAACCCTCTTTTGCACTTTTCCTCTGCCTTTCACTGTCTCACTCACGTTTAAATAATAAAAAAGAGGAAAATGGATGGTTTTGGAGAAGTTTGTCTACTTGGAGATGGCTTTGATCCGACCGGAATTGTGAGGATAAGGGAAGATGAATATGATAGCAGATCAGGCAGCGACAACATTGATGGTGCTGTATCTGGGGATGATCAAGATGCTAATGATGAACAACCACCAAAAAGGAAGAAGTACCATAGGCATACTCCCCATCAGATCCAAGAGCTTGAGATTTTCTTCAAGGAGTGTCCTCATCCTGATGATAAACAAAGAAGTGAGCTCAGTAGGAGGCTTGGTTTGGAGACAAAGCAAGTGAAGTTTTGGTTTCAAAATCGTCGAACACAAATGAAGGCGCAAATAGAACGACATGAGAATGCAATTCTTAAGCAAGAAAACGATAAGCTCCGGGCCGAGAATAGTGTGATGAAGGATGCTATTTCTAATCCAACGTGTAATACTTGTGGTGGCCCTTCAATTCCTGTTCATTTATCATTTGAAGAACACCAGCTTAGGATTGAGAATGCCAGATTAAGAGATGAACTGCACCGGTTATATGCTGTCACCAATAAATTCTTGGGCTGGCCGGTCTTGCCCTTCAATCATGGCTCTTCCCCAAGTTCTGACTCTTGCTTGGAACTTTCTGTAGGAAGAAATGGAATTGGAAATTTGAATACTATTTCTGATTCTATGGGCCTTAACTTGGGAAATGAACTTTTCAGTGCTGGCCCTGTGATGCCTATTAGTAAGCCTGAAATAGGCATGCTAAGTAATGATATACCACTTGAGAGAACAATATATGTGGATCTTGCTTTGGCAGCTATGAATGAATTGGTTAAGATGGCTCAAATGGATGATCCCCTTTGGATCAGAACTCGGGATGACAGTGGCAAAGAGACATTGAATCTTCATGAATATTCAAGGACATTTCCTTCTTCGGCTGGTATGAAACATAGTAATTGGACAACCGAGGCGACCAGAGATACAACAATGGTCATCATCAACAGCTTGGCACTTGTTGAGACATTGATGGACGCAAATCGATGGGCAGAAATGTTTCCTTGCTTGATTGCTAGAGCTACGACAGTCGATGTGATATCAAGTGGCATGGGTGGAACCAGAAATGGTGCATTACAATTGATGCATGCTGAACTCCGAGTACTTTCCCCACTTGTTCCAGCTCGTACATTTAAGTTCCTCCGCTTCTGCAAGCAGCATGCTGATGGTCTATGGGCTGTAGTTGATGTTTCCATTGGAGAAGGTTCAAATTCAAACTCGTTTTTCAGTTGCAGGAGGCTCCCTTCGGGCTGTGTTGTGCAAGATATGCCTAATGGTTTCTCTAAGGTTACATGGGTGGAACATACAGAATATGATGAGACTGTTATACACCAGCTTTACCGCCAGTTAATTAGTTCGGGCAGCGGCTTTGGTTCACAACGGTGGCTTGCTACCCTTCAAAGACAATGTGACTGTTTGGCAATTCTCATGTCTTCTACGATCCCCACTGAAGATCCTGCAGGAATATCGCCATGCGGTAGGAGAAGTCTGCTGAAGCTATCGCAACGTATGGTGGATAACTTCTGTTCTGGGGTTTGTAGTTCGACTTTGCATAAGTGGGACAAGCTTGTTGTAGGCAATATTAGTGAAGATGTAAAAGTGATGGCTAGAAAGAGCATCAACGAACCCGGCGAGCCACCCGGTATCGTGTTGAGTGCTGCAACTTCGGTTTGGATGCCAGTAACCCAGCAGAGGTTGTTTGCATTCTTGCAAGATGAGTGCTTACGGAGTGAGTGGGATATTTTATCCAACAGCCGGCCAATGCTAGAGATGCTCCGCATCTCAAAAGGCCAGGGACCGGATAACCGTGTTTCTCTCCTGCGTGCTAATCCCATGAACGCTGATGAGAGCACAATGTTCATATTGCAAGAGACTTGGACAGATATATCAGGATCACTGGTCGTTTACGCTCCAGTCGACACTTCGTCAGTTAATTTGGTGATGCGCGGAGGAGATTCTGCTTATGTATCACTTTTACCATCAGGATTTGCAATTCTCCCTAATGGTCTATCCAACTATGCTTGTACAAACAACGACCGAAATGCATCGATCAAGTCAAGTGTTAACAGTGGCCATGGTGGTGGATGTCTCCTCACAGTTGCATTCCAGATTTTGGTGAACAACCTTCCAACGGCCAAACTCACCGTCGAGTCAGTTGAGACAGTTAACAATCTCATTTCTTGCACCATCCAAAAGATCAAAACTGCTCTTCAAGTATCATAACGATACTTGCTCAGTAAGCTTTTGTTGTCTTTTTTTAATTCTCTTTTGTCAGAAAGGTACAGGGTAAGCTCATGTGCAAAGCTTATGTGAAAATTCATAGAACTAACGTGAAAAGAGCTCGAGTAGAGGACGTCAATACATAGGTTACTAGTCAAGAACGAACCGCAAATACTAGATTTCGTATCAGGTTCATACAAGTTTGTAACGTTGTGATTGTCATGTGGGTGGTTCGGTTCGGGTATTGACTCGATGACCAGTGAGGAGAACTGATTTGTGTGTTTGTCTTGAGTTGTTTTCTTTTTGTGTTATGAAACTTTTTGTGATGTA 2655 43.2 MDGFGEVCLLGDGFDPTGIVRIREDEYDSRSGSDNIDGAVSGDDQDANDEQPPKRKKYHRHTPHQIQELEIFFKECPHPDDKQRSELSRRLGLETKQVKFWFQNRRTQMKAQIERHENAILKQENDKLRAENSVMKDAISNPTCNTCGGPSIPVHLSFEEHQLRIENARLRDELHRLYAVTNKFLGWPVLPFNHGSSPSSDSCLELSVGRNGIGNLNTISDSMGLNLGNELFSAGPVMPISKPEIGMLSNDIPLERTIYVDLALAAMNELVKMAQMDDPLWIRTRDDSGKETLNLHEYSRTFPSSAGMKHSNWTTEATRDTTMVIINSLALVETLMDANRWAEMFPCLIARATTVDVISSGMGGTRNGALQLMHAELRVLSPLVPARTFKFLRFCKQHADGLWAVVDVSIGEGSNSNSFFSCRRLPSGCVVQDMPNGFSKVTWVEHTEYDETVIHQLYRQLISSGSGFGSQRWLATLQRQCDCLAILMSSTIPTEDPAGISPCGRRSLLKLSQRMVDNFCSGVCSSTLHKWDKLVVGNISEDVKVMARKSINEPGEPPGIVLSAATSVWMPVTQQRLFAFLQDECLRSEWDILSNSRPMLEMLRISKGQGPDNRVSLLRANPMNADESTMFILQETWTDISGSLVVYAPVDTSSVNLVMRGGDSAYVSLLPSGFAILPNGLSNYACTNNDRNASIKSSVNSGHGGGCLLTVAFQILVNNLPTAKLTVESVETVNNLISCTIQKIKTALQVS 751
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 27104562 27110381 - XM_039030090.1 Bhi01g01350 24123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g01350 751 SMART START_1 261 483 IPR002913 GO:0008289
Bhi01g01350 751 Pfam Homeodomain 55 110 IPR001356 GO:0003677
Bhi01g01350 751 Coils Coil 106 138 - -
Bhi01g01350 751 Pfam START domain 262 482 IPR002913 GO:0008289
Bhi01g01350 751 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 17 749 - -
Bhi01g01350 751 MobiDBLite consensus disorder prediction 25 62 - -
Bhi01g01350 751 SUPERFAMILY Homeodomain-like 39 111 IPR009057 -
Bhi01g01350 751 SUPERFAMILY Bet v1-like 253 483 - -
Bhi01g01350 751 CDD START_ArGLABRA2_like 261 481 - -
Bhi01g01350 751 ProSiteProfiles START domain profile. 252 486 IPR002913 GO:0008289
Bhi01g01350 751 ProSiteProfiles 'Homeobox' domain profile. 52 112 IPR001356 GO:0003677
Bhi01g01350 751 SUPERFAMILY Bet v1-like 512 745 - -
Bhi01g01350 751 Gene3D - 41 128 - -
Bhi01g01350 751 CDD homeodomain 55 112 IPR001356 GO:0003677
Bhi01g01350 751 SMART HOX_1 54 116 IPR001356 GO:0003677
Bhi01g01350 751 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 17 749 IPR042160 -
Bhi01g01350 751 Gene3D - 259 468 IPR023393 -
Bhi01g01350 751 ProSitePatterns 'Homeobox' domain signature. 87 110 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01348 Bhi-Chr1:27104562 Bhi01g01350 Bhi-Chr1:27104562 0 dispersed
Bhi01g01349 Bhi-Chr1:27104562 Bhi01g01350 Bhi-Chr1:27104562 0 tandem
Bhi01g01350 Bhi-Chr1:27104562 Bhi01g01351 Bhi-Chr1:27104562 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
129 PF01852 START 1.20E-48 CL0209 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g01350 K09338 - csv:101218216 1419.06