Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g01368 ATACGTGTGTGGGCAGTGAAAGAGTGAGAGTGGGTCATTTCATGAAAATATATAGAGAGATCGTTGGTTTTTATTTAAAGCATAAAAGTCCGCGAACTCCCCACGCTTTTTACCACTCCTTCTCCTCCTTTATAAAACCCCGCCGCTTCCAATTTCAATTCCAAATTCCATTCTTAATTTTCCTCTCTTTTCATTCTCCAATGCACCCATTAATTTGATCTCTTCCATTTCTATGTCTGATAATAATAATAATTCTTCCGGCCGCCCAGGTCGCCACCCAATCTTCCGCGGTATCCGTTCCCGAAGTGGCAAATGGGTCTCTGAGATTCGCCAGCCACGTAAGACCACTCGCATTTGGCTCGGTACTTACCCCACTCCCGAAATGCGCGCCGCCGCCTACGACGTCGCCGCCCTCACTCTCAAAGGCCCTAATGCCTCTCTTAATTTCCCTCACTCTCTTCCTTCCTATCCATTCCAANNTTCCACTTCTCCATCTGATATTCGCACCGCCGCCGCCATTGCCGCCGCCTCCAGACACCCCGAAATACAATAACCCCACGCTTCTTCTGCTGCTCCCGCTCCCGCTCCTGCTCTGTACGCTTCGCAGACCGACCCGGTCGACGAAGGTGGGCCCTCCTCCCATCCCACGGCGGATTCTTCCGGCAAGTTTTGTGACGAGGAAGAGTTACTGAACATGCCCAATTTACTGGTGGACATGGCGGAGGGAATGCTGGTGAGTCCTCCTCGGATGAAGTCATCGTCCTCCTATGACGACTCTCCCACCCATTCTAAAGGAGATGATGAATTATGGAGTTACTCTAATAATTCAACAAATTATCTCATTAATAAAATTCAAAAAAAAAAAAAAAAAAACAGAGCGGGTGAATCATATCATAATCCACATTTTCATGTGTCTCCTGAATCAATCACTTTATTTTATGGGGTTTCTTTTTCTTTTCCTTTCATCGGTTTCTGGGTCGGCTTGCTTCTGTCCTAATTTTCCTTCCGGACGATCAAATTTGAGGATTATTAATTTCTAACTATGGTTAGAGAATTGGAAGGTTTAATTTAAAA 1074 45.72 MSDNNNNSSGRPGRHPIFRGIRSRSGKWVSEIRQPRKTTRIWLGTYPTPEMRAAAYDVAALTLKGPNASLNFPHSLPSYPFQXSTSPSDIRTAAAIAAASRHPEIQXPHASSAAPAPAPALYASQTDPVDEGGPSSHPTADSSGKFCDEEELLNMPNLLVDMAEGMLVSPPRMKSSSSYDDSPTHSKGDDELWSYSNNSTNYLINKIQKKKKKNRAGESYHNPHFHVSPESITLFYGVSFSFPFIGFWVGLLLS 254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 27439030 27440102 + XM_039020573.1 Bhi01g01368 24141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g01368 254 SMART rav1_2 17 79 IPR001471 GO:0003700|GO:0006355
Bhi01g01368 254 Gene3D AP2/ERF domain 17 75 IPR036955 GO:0003700|GO:0006355
Bhi01g01368 254 MobiDBLite consensus disorder prediction 1 20 - -
Bhi01g01368 254 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 9 195 - -
Bhi01g01368 254 MobiDBLite consensus disorder prediction 169 192 - -
Bhi01g01368 254 MobiDBLite consensus disorder prediction 96 147 - -
Bhi01g01368 254 CDD AP2 16 75 IPR001471 GO:0003700|GO:0006355
Bhi01g01368 254 ProSiteProfiles AP2/ERF domain profile. 17 73 IPR001471 GO:0003700|GO:0006355
Bhi01g01368 254 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF026 9 195 - -
Bhi01g01368 254 Pfam AP2 domain 17 65 IPR001471 GO:0003700|GO:0006355
Bhi01g01368 254 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Bhi01g01368 254 PRINTS Ethylene responsive element binding protein signature 55 75 IPR001471 GO:0003700|GO:0006355
Bhi01g01368 254 SUPERFAMILY DNA-binding domain 17 75 IPR016177 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi01g01368 Bhi12g00203 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01368 Bhi-Chr1:27439030 Bhi12g00203 Bhi-Chr12:5877801 1.03E-43 dispersed
Bhi01g01368 Bhi-Chr1:27439030 Bhi01g01369 Bhi-Chr1:27531347 9.52E-31 tandem
Bhi11g00397 Bhi-Chr11:9439334 Bhi01g01368 Bhi-Chr1:27439030 7.54E-55 transposed
Bhi01g01368 Bhi-Chr1:27439030 Bhi12g00202 Bhi-Chr12:5831949 8.84E-31 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
133 PF00847 AP2 1.70E-07 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g01368 - - cmo:103484042 285.034