Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bhi01g01369	CCAAATTCACCAAACACTATAAAAATCATGATCTCTCTTTCTTTATCCATCAAACCCATCTCTAATTCCTTCAATTTCACTCCTAATTCGGATAATTTCAATTTAAATCACTTAACCCACTTCCAAAAATGGATTCTTTTTCAACTTTTTATGAAGACTACTTTTCCAGTTCCGAGAGTAGTAATTGCCGCCGCCCCTTTTATTTGGATGAGGAGATTATGCTGGCGGAGAGTAATCCCAAGAAGAGGGCTGGCAGGAAGAAGTTTAAGGAGACAAGGCATCCGGTTTACAGAGGAGTCAGGAGGAGGAACTCCGGCAAGTGGGTCTGTGAAGTGAGAGAGCCCAATAAGAAGTCAAGGATTTGGCTTGGCACTTTTCCCACCGCGGAGATGGCGGCTCGGGCTCACGACGTCGCTGCCCTCGCGCTTAGAGGTCTCACTGCTTGTCTCAATTTCGCCGATTCTGCCTGGCGGCTTCCTGTGCCGGCGTCTGCTGACGCCAGAGATATCCAGAAGGCGGCAGCGGAGGCGGCGGAGGCATTCCGGCCGGTTGAGTCAGATAGGTCTTCGGTTGATGACTCAAGGACGGAAAATTGGATGACGGCGGAGACGACGCCGGAAAACGTGTTTTACATGGATGAGGAAGCAGTTTTTGGAATGCCGGGACTGTTGGAGGATATGGCTGCGGGGATGATGTTGCCTCCACCTCAGCATTTTCGTGATGACATGGATTTTTATTCTGACGTGTCATTATGGAGTTATTAACGATCATTATTAGTCTTTACATTTACATTCAATTTATGTACATGTACATAGAAATTATAACATAAAAAGAGTGTTTTTAAGGTATTGATTTTCACATAGTTAGTAGCTTAGAATGTGCGGTTGATTGTAGCAAAAGTGATACAGTGAAAACCGAGTATTTTCCCCCACTTAA	936	45.19	MDSFSTFYEDYFSSSESSNCRRPFYLDEEIMLAESNPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAALALRGLTACLNFADSAWRLPVPASADARDIQKAAAEAAEAFRPVESDRSSVDDSRTENWMTAETTPENVFYMDEEAVFGMPGLLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY	211

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
1	27531347	27532282	+	XM_039044617.1	Bhi01g01369	24142

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bhi01g01369	211	SMART	rav1_2	53	116	IPR001471	GO:0003700\|GO:0006355
	Bhi01g01369	211	Gene3D	AP2/ERF domain	53	111	IPR036955	GO:0003700\|GO:0006355
	Bhi01g01369	211	ProSiteProfiles	AP2/ERF domain profile.	53	110	IPR001471	GO:0003700\|GO:0006355
	Bhi01g01369	211	CDD	AP2	54	112	IPR001471	GO:0003700\|GO:0006355
	Bhi01g01369	211	Pfam	AP2 domain	52	102	IPR001471	GO:0003700\|GO:0006355
	Bhi01g01369	211	PRINTS	Ethylene responsive element binding protein signature	54	65	IPR001471	GO:0003700\|GO:0006355
	Bhi01g01369	211	PRINTS	Ethylene responsive element binding protein signature	76	92	IPR001471	GO:0003700\|GO:0006355
	Bhi01g01369	211	PANTHER	AP2/ERF DOMAIN-CONTAINING TRANSCRIPTION FACTOR	14	211	-	-
	Bhi01g01369	211	SUPERFAMILY	DNA-binding domain	53	112	IPR016177	GO:0003677
	Bhi01g01369	211	PANTHER	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D	14	211	IPR045277	GO:0003700

Event-related genes

Select	Gene_1	Gene_2	Event_name
	Bhi01g01369	Bhi12g00800	CCT
	Bhi01g01369	Bhi12g00800	ECH

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	Bhi01g01369	Bhi-Chr1:27531347	Bhi12g00800	Bhi-Chr12:24081018	1.22E-85	dispersed
	Bhi01g01368	Bhi-Chr1:27439030	Bhi01g01369	Bhi-Chr1:27531347	9.52E-31	tandem

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	134	PF00847	AP2	9.50E-16	CL0081	Bhi	TF

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bhi01g01369	-		K09286	csv:101220749	350.132