Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g01386 GTTAGAGGACAAAGGGAATAAAAATTAGTGTATAAATGAAAGAGGAAATATAATGAAAAGGGCATTGAGTCCTGGAGAAGAAGTGATGAATGCAACATTTCAATAATCAACCAATCCCTCCCGTGTGTGTTAAAAACCCTTTATAGGGTTTCTAAAATTTCTTCCATTTCCTTTTTCTTCTAAAATCTCTTCTACCTGTTTTTCACCATTTTCCCCACTTCTGTTTTTGGCTCTAAATCACTTCTTTTTGTGTTTGGGGGGCCTTTTTATTTTATTTTATTTTTCCATTTTTGAACCAAAAACAAAAACTCTCTTTTTCTGGGGTTTCTGGGTTTTGAGTTTTTTATGCTATTTTTGGTTTTTAAGCTATTTTCTTTCTCTCAAACTTTTTCAAAACTCTTTCTTCCCTTGTTTGTTTTGTAAGATATATACATAAATCCATTATTGAAGCACCCATTTTTTAAAATTTTGGCTCTGATCTGAACAACCCTTTAAAAGAAAAAAAAAAAAAGAAAAAAGAAAAAAAAAAGAAAGTGAGTAAGAATAGAAAAAAATGGTGAGAGGAAAAGTAGAAATGAAACGGATAGAAAATGCGACAAGTCGGCAGGTAACGTTCTCAAAGAGACGAAATGGACTATTGAAGAAGGCGTATGAACTATCTGTGCTGTGTGATGCTGAAGTTGCTGTCATCATTTTCTCACAAAAAGGCCGTCTCTATGAATTTGCAAGCTCTGAGATGCCAAGGATTGTGGAGCGCTATCGCAAATGTGCAAGAGATGCCAAAAACAATACCAAATTTGATAGACAACTTCAATTACAGTCAAGGGTTGAAGCTGAAAGCATTAATAAGAAGATGGAGTTACTGCAACTTTCTCACAGGAAGCTATTGGGATATGGACTGGATTCTTGTTCCCTTGATGAACTTCAAGTACTTGATGCTCAGCTTCAACGAAGCCTCTTCCAAATTAGGGCCAGAAAGGCTCAGCTATACAAGGAGCAGCTTCAACAACTACAAGAAAAGGAAAGACTACTTTCCGAAGAAAAGAAGAAATTGTCTTTAAAGGTTACAGCTCACGGTGCCGCCGCTATGCACGGCTGCCGGAGGAGCCCAACTTCGGTAGTCAACACCCAATTGTCAATTTGATCGTACGTGGATGACATATATATATATTCAACGTTACCCAAACACAAAAAAGC 1197 36.51 MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASSEMPRIVERYRKCARDAKNNTKFDRQLQLQSRVEAESINKKMELLQLSHRKLLGYGLDSCSLDELQVLDAQLQRSLFQIRARKAQLYKEQLQQLQEKERLLSEEKKKLSLKVTAHGAAAMHGCRRSPTSVVNTQLSI 196
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 27879666 27889884 + XM_039027142.1 Bhi01g01386 24159
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g01386 196 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Bhi01g01386 196 CDD MADS_MEF2_like 3 78 IPR033896 GO:0000977|GO:0045944
Bhi01g01386 196 SUPERFAMILY SRF-like 3 87 IPR036879 GO:0003677|GO:0046983
Bhi01g01386 196 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bhi01g01386 196 Gene3D - 14 93 IPR036879 GO:0003677|GO:0046983
Bhi01g01386 196 PANTHER MADS-BOX PROTEIN SOC1 1 175 - -
Bhi01g01386 196 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bhi01g01386 196 Coils Coil 143 170 - -
Bhi01g01386 196 Pfam K-box region 89 171 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bhi01g01386 196 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bhi01g01386 196 ProSiteProfiles K-box domain profile. 87 177 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bhi01g01386 196 PANTHER MADS BOX PROTEIN 1 175 - -
Bhi01g01386 196 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bhi01g01386 196 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bhi01g01386 196 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Bhi01g01386 Bhi12g00330 CCT
Bhi01g01386 Bhi12g00330 ECH
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01386 Bhi-Chr1:27879666 Bhi12g00330 Bhi-Chr12:9514524 1.88E-57 dispersed
Bhi01g01385 Bhi-Chr1:27879666 Bhi01g01386 Bhi-Chr1:27879666 2.85E-141 tandem
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
137 PF01486 K-box 8.00E-20 No_clan Bhi TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g01386 - - csv:101211542 277.33