Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi01g01386 | GTTAGAGGACAAAGGGAATAAAAATTAGTGTATAAATGAAAGAGGAAATATAATGAAAAGGGCATTGAGTCCTGGAGAAGAAGTGATGAATGCAACATTTCAATAATCAACCAATCCCTCCCGTGTGTGTTAAAAACCCTTTATAGGGTTTCTAAAATTTCTTCCATTTCCTTTTTCTTCTAAAATCTCTTCTACCTGTTTTTCACCATTTTCCCCACTTCTGTTTTTGGCTCTAAATCACTTCTTTTTGTGTTTGGGGGGCCTTTTTATTTTATTTTATTTTTCCATTTTTGAACCAAAAACAAAAACTCTCTTTTTCTGGGGTTTCTGGGTTTTGAGTTTTTTATGCTATTTTTGGTTTTTAAGCTATTTTCTTTCTCTCAAACTTTTTCAAAACTCTTTCTTCCCTTGTTTGTTTTGTAAGATATATACATAAATCCATTATTGAAGCACCCATTTTTTAAAATTTTGGCTCTGATCTGAACAACCCTTTAAAAGAAAAAAAAAAAAAGAAAAAAGAAAAAAAAAAGAAAGTGAGTAAGAATAGAAAAAAATGGTGAGAGGAAAAGTAGAAATGAAACGGATAGAAAATGCGACAAGTCGGCAGGTAACGTTCTCAAAGAGACGAAATGGACTATTGAAGAAGGCGTATGAACTATCTGTGCTGTGTGATGCTGAAGTTGCTGTCATCATTTTCTCACAAAAAGGCCGTCTCTATGAATTTGCAAGCTCTGAGATGCCAAGGATTGTGGAGCGCTATCGCAAATGTGCAAGAGATGCCAAAAACAATACCAAATTTGATAGACAACTTCAATTACAGTCAAGGGTTGAAGCTGAAAGCATTAATAAGAAGATGGAGTTACTGCAACTTTCTCACAGGAAGCTATTGGGATATGGACTGGATTCTTGTTCCCTTGATGAACTTCAAGTACTTGATGCTCAGCTTCAACGAAGCCTCTTCCAAATTAGGGCCAGAAAGGCTCAGCTATACAAGGAGCAGCTTCAACAACTACAAGAAAAGGAAAGACTACTTTCCGAAGAAAAGAAGAAATTGTCTTTAAAGGTTACAGCTCACGGTGCCGCCGCTATGCACGGCTGCCGGAGGAGCCCAACTTCGGTAGTCAACACCCAATTGTCAATTTGATCGTACGTGGATGACATATATATATATTCAACGTTACCCAAACACAAAAAAGC | 1197 | 36.51 | MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASSEMPRIVERYRKCARDAKNNTKFDRQLQLQSRVEAESINKKMELLQLSHRKLLGYGLDSCSLDELQVLDAQLQRSLFQIRARKAQLYKEQLQQLQEKERLLSEEKKKLSLKVTAHGAAAMHGCRRSPTSVVNTQLSI | 196 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 27879666 | 27889884 | + | XM_039027142.1 | Bhi01g01386 | 24159 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi01g01386 | 196 | ProSitePatterns | MADS-box domain signature. | 3 | 57 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi01g01386 | 196 | CDD | MADS_MEF2_like | 3 | 78 | IPR033896 | GO:0000977|GO:0045944 | |
Bhi01g01386 | 196 | SUPERFAMILY | SRF-like | 3 | 87 | IPR036879 | GO:0003677|GO:0046983 | |
Bhi01g01386 | 196 | SMART | madsneu2 | 1 | 60 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi01g01386 | 196 | Gene3D | - | 14 | 93 | IPR036879 | GO:0003677|GO:0046983 | |
Bhi01g01386 | 196 | PANTHER | MADS-BOX PROTEIN SOC1 | 1 | 175 | - | - | |
Bhi01g01386 | 196 | Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) | 10 | 57 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi01g01386 | 196 | Coils | Coil | 143 | 170 | - | - | |
Bhi01g01386 | 196 | Pfam | K-box region | 89 | 171 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Bhi01g01386 | 196 | ProSiteProfiles | MADS-box domain profile. | 1 | 61 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi01g01386 | 196 | ProSiteProfiles | K-box domain profile. | 87 | 177 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Bhi01g01386 | 196 | PANTHER | MADS BOX PROTEIN | 1 | 175 | - | - | |
Bhi01g01386 | 196 | PRINTS | MADS domain signature | 3 | 23 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi01g01386 | 196 | PRINTS | MADS domain signature | 23 | 38 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi01g01386 | 196 | PRINTS | MADS domain signature | 38 | 59 | IPR002100 | GO:0003677|GO:0046983 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bhi01g01386 | Bhi12g00330 | CCT | |
Bhi01g01386 | Bhi12g00330 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi01g01386 | Bhi-Chr1:27879666 | Bhi12g00330 | Bhi-Chr12:9514524 | 1.88E-57 | dispersed | |
Bhi01g01385 | Bhi-Chr1:27879666 | Bhi01g01386 | Bhi-Chr1:27879666 | 2.85E-141 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
137 | PF01486 | K-box | 8.00E-20 | No_clan | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi01g01386 | - | - | csv:101211542 | 277.33 |