Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g01397 AGGTGGGACCGATGTTCTGTCGTTTATGACAAGCCTGGCGTGGAAATTTCTGATTGATCCACTTGTATCGTCCTGGCAAGATGGGCCTCCACTTTTCGAGCACTTTTGACACGTGTCCTCGAGGGAAAATTCTCGCGATACGAGAAATTGACTGGAAACAGAAAGGAATTAGTGAAAAGGGATCGTCATGAGTACCACGTGTCCTCACAGCATGAAATAGAGGTCGGATGTAGACAGGTGGGGCAGGCTCTGTAGCTGCCCGTAGATTTAGAATTGCCCGAGAGGCTCTCTTTTTTTTTTTTTTGTGTCCCTGCTCGACGAGGGAAAAATATATATATTTTTTTCCCCTATAGAGGAAAACAGCGACACGTTTTCTTCTGAGCGAAATTCCGCACACCATTACTTTGCTTGGTTCATATTAACACTTCGCCGATGATGATTGTCCTCAGGCAGAGATACTCCACGGCGAGTTCCTGCTTCGGACGATTCCGATGACGGAGGTTTACAGTATAATGCCAAGCGAAGATGATGAAGATTCGCCGGCAAAATGCCGAGAGCGCCGGCGACGTAGAATAGAGATGAGACGGTTAGCAACAGTATCGTCGGCGAATCCCTCGTCCTCCACCACTCACCACCGGAAAGAGAATCAAACTGGTAGCTCCGGTTTTGAGAAGAAACGTGGTCGGAAGACGGACGGTGACGGTAATCCGGAGATTTCATCGTCTTCGTCATCGGGGGAGGACGTGAAGACTGTAAGAGCTTCAGCATCGGTACCTCAGCCGGTTTTCGGGATGATGTCGGTATCCGGGAGGTCACGTGAGATGGAGGATGCAGTATCGGTGAGCACGTGCGTTCTAGGTCCAGAAAATTTCCGACGGCAACTGGTGCATTTCTTCGCCGTCTACGATGGACATGGAGGCCCTCACGTGGCAGCGTTATGTAGGGAGAAGATGCACGTGTTCGTACAAGAGGAATTTTCGCGCGTGATTTGCACGCGCGAGGAAGGTGAGAGTGGCGGTGGTGGTAGCACCGCGGCGGAGGGGGTTGAGTTGGAGGAGGAGGAGGAGGCGACTTGGAGAAGAGTGATGCGGCGGAGCTTTGAGAGAATGGACGAAGTGGCACTCAGTACTTGTGCCTGTGGGAGCGTCGGAGGCAAGTGTGGGTGCCATCCGATGGAGGTGGCTCTCGGCGGCTCCACCGCCGTCGTCGCTGTACTCACACCAGATCACATAATCGTCGCCAACTGCGGCGATTCACGCGCCGTCCTTTGCCGAGGAGGAAGGGCCATTCCCCTCTCTAATGATCACAAGCCTGATAGAAATGATGAACTAGCAAGAATTGAAGCTGCTGGAGGACGGGTGATTTTCGTAAATGGAGCTCGGGTTGAAGGAATCCTTGCAATGTCCCGTGCAATAGGTATGAAGGTGCAGCTGTTGAGGGTGGCTTTGTATTTATGTTCCCATTTAAGTAATGGATTTACGTGTATGGGTTCAGTCATTCTGATCAATTGATTGTGTTAGAGATTGAAGGAAAGTACTTTCTTTTATTTCCTTCAGTTCATGTATTTTCAAGATGAACATAGATTTTTCCTTTTTCCTTTAAGTTTTTAGATTTTGTTCTTTTGTATTAAGTTCACTCTTTGTCTGGATTTCTGCGAGATAAATCACCTTTTTTTGCGACACAAATGATAATTCTAAGTCACTTATATATGGAGCTTCTGACAAGCAGCCAGTTTGATATATTGTATTCTTTGGACTATAATAAACAATTCGTTTATTAATTAATTTTCTTCTGGAGGATTGACAATGTTTATCTTTTTACGTGATGATTCTTTTAAACAGGGGACAAGTATCTCAAGTCAGTTGTAATATCAGAGCCTGAAATTACTTTCACCAAAAGAGAATCAGATGATGAATGTTTAATACTTGCAAGTGATGGCTTGTGGGATGTTCTTTCAAGTGAGTTGGCTTGTGAGGTAGCTCGT 1984 46.82 MTEVYSIMPSEDDEDSPAKCRERRRRRIEMRRLATVSSANPSSSTTHHRKENQTGSSGFEKKRGRKTDGDGNPEISSSSSSGEDVKTVRASASVPQPVFGMMSVSGRSREMEDAVSVSTCVLGPENFRRQLVHFFAVYDGHGGPHVAALCREKMHVFVQEEFSRVICTREEGESGGGGSTAAEGVELEEEEEATWRRVMRRSFERMDEVALSTCACGSVGGKCGCHPMEVALGGSTAVVAVLTPDHIIVANCGDSRAVLCRGGRAIPLSNDHKPDRNDELARIEAAGGRVIFVNGARVEGILAMSRAIGMKVQLLRVALYLCSHLSNGFTCMGSVILIN 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 28617181 28624456 - XM_039027765.1 Bhi01g01397 24170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g01397 339 MobiDBLite consensus disorder prediction 1 89 - -
Bhi01g01397 339 ProSiteProfiles PPM-type phosphatase domain profile. 98 339 IPR001932 -
Bhi01g01397 339 MobiDBLite consensus disorder prediction 71 87 - -
Bhi01g01397 339 CDD PP2Cc 98 311 IPR001932 -
Bhi01g01397 339 MobiDBLite consensus disorder prediction 53 70 - -
Bhi01g01397 339 PANTHER PROTEIN PHOSPHATASE 2C 75-RELATED 37 312 - -
Bhi01g01397 339 PANTHER ALPHABET, ISOFORM E-RELATED 37 312 - -
Bhi01g01397 339 Pfam Protein phosphatase 2C 99 310 IPR001932 -
Bhi01g01397 339 SUPERFAMILY PP2C-like 92 314 IPR036457 -
Bhi01g01397 339 SMART PP2C_4 88 338 IPR001932 -
Bhi01g01397 339 ProSitePatterns PPM-type phosphatase domain signature. 134 142 IPR000222 GO:0043169
Bhi01g01397 339 MobiDBLite consensus disorder prediction 169 190 - -
Bhi01g01397 339 Gene3D - 94 323 IPR036457 -
Bhi01g01397 339 MobiDBLite consensus disorder prediction 35 52 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01397 Bhi-Chr1:28617181 Bhi08g00562 Bhi-Chr8:18887721 3.02E-60 dispersed
Bhi01g01396 Bhi-Chr1:28616396 Bhi01g01397 Bhi-Chr1:28617181 0 tandem
Bhi01g01397 Bhi-Chr1:28617181 Bhi01g01398 Bhi-Chr1:28617192 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g01397 K14497 - csv:101206634 534.258