Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g01426 GAAGTAGTTTAAAGCCCATTAATAGCTGAAGAATTATGCCCAATTGTTGATCTTCGTTTATTTTTTTGGCCTTCTAATGGCTGTAGGCCGTGCCAATTCTTTGTTTTTGGCTTTCGCTTTTGCATGGCTCATTAGGGCTTGCATGGCCGGTCAAATTGGTTTTAGATCGAGGTTGCTAGCTAGTGATCGAAATCAAGTGTGGTTTTCTGATAATGGCACATTTGCATTTGGATTTAGTCCGGTGAGTAGTAGCGGTGGCAACGTCGGTGACCGATTTCTACTTGCCATTTGGTTTGCGGAGCTTCCGGGGGATCGAACTGTAATTTGGTCGGCTAATAGTTCCTCTGCTCTTCGTTTAAGCGACCATGTTTCATTTCTTTCTCAATCATTTACTTATAGAAACTCTCCAGTCTCCAAGAATGCGATTGTGGAACTCGACGGCACCGGGAACCTCGTCCTCACCAACGACGGCAGCGCCGCCGTCTGGTCCTCCAACACCTCTGGAGATGGAGCAGAGTTTGCTGTCATGTCGGAATCCGGAAATTTCATTCTCTTCAACGCTGAACGAAGCCCTGTTTGGCAGAGCTTTTCACACCCTTCTGATACCCTTCTCCCAAATCAACCTCTATCAGTCTCTTTAGAGCTCACAACATCCAAATCCCCTTCCCATGGCGGATATTATACCCTAAAAATGCTCCAACAACGCACCACTCTCAAACTCGCCTTGACATTCAATTTGCCTGAAAGTTACGAGGGTTTGCCTGAATCTTACGCAAATTACTCATACTGGTCGGCCCCTGAAATTTCCAATGTAACGGGGGAAGTCATCGCTGTTTTAGACGAAGGTGGAAGCTTCGGTGTTGTGTATGGGGACTCCTCTAATGGTGCGGTTTATGTTTACAAAAACGATAACGATAATGGCGGATTATCGGCATCGACAAATCAGTCTATTCGTAATGTACGGACACAAGTTGTTCGACGATTGACCTTAGAGAGTAATGGGAACTTGCGTTTGTATCGATGGGATGATGATGTTAATGGGTCTCGTCAATGGGTGCCGGAATGGGCGGCGGTTTCAAATCCTTGTGATATTGCTGGAATTTGTGGAAATGGGATTTGCTATTTGGATAAAAGCAAGACGAATGCGTCTTGTTCTTGCTTGCCGGGGACTTTCAAGGACAACGGCGGCAGCCAATGCTTTGAAAATTCATCGTCGGTTGGGAAATGCGGTGGCCAAAATCATCAATCTCCCTCGACTCAGTACAGGATTTCTCCTGTTCAGCAAACAAATTACTATTATTCTGAGTTCTCTGTAATTGCAAATTACAGCGATATCAACACAGTATCGAAATGTGGTGATGCTTGCTTAACTGATTGTGAGTGTGTTGCTTCTGTTTATGGGCTTGACGATGAGAAGCCTTACTGTTGGGTGTTGAGAAGCTTAGATTTCGGTGGATTTGAGGATGCTGGTTCGACTCTCTTTGTGAAGGTCAAGTCTAATGGCTCAATACCAGAAGCCAACGGGCCAGGAGCTGAAGGAGATTCTTCAGGAAGTGCTAAAGAAAAGGCTACGGTCCGGACGAACAATTTCTCCGAGGTTCTTGGAACAGGGGGATTTGGTAGTGTATATAAAGGAAGCCTTGGAGATGGGACTCTGGTAGCTGTGAAGAAACTTGACAGAGTTTTCCCTCATGGAGAGAAGGAGTTTATAACCGAAGTTAACACAATTGGATCTATGCATCACATGAACTTGGTTCGGCTCTGCGGATACTGCTCAGAAGGATCGCATAGGCTTTTAGTTTATGAGTTTATGAAAAATGGGTCATTGGACAAGTGGATATTTCCAACGCATCATAATCAAGACAGAATTTTAGATTGGTCGACTCGGTTTCACGTAGCTGTTGGCACAGCACAAGGGATTGCTTATTTCCATGAGCAATGCAGGAATAGGATCATACACTGTGATATCAAGCCAGAAAACATTCTATTGGATGAAAACTTTTGTCCCAAAGTTTCAGACTTTGGTCTGGCTAAGCTGATGGGAAGAGAGCACTCACATGTTGTAACAATGGTGAGAGGGACAAGAGGATATTTGGCTCCAGAGTGGGTTAGTAATCGCCCAATCACTGTTAAAGCCGATGTTTATAGCTATGGAATGCTTCTCTTGGAGATTGTTGGTGGCAGGAGAAACCTTGATATGTCTTTTGATGCTGAAGACTTCTTCTATCCTGGTTGGGCTTACAAGGAGATGAGGAATGGGACGCATTTCAAAGTTGCAGACAGGCGACTAGAGGGTGCAGTGGAGGAAGAAGAGCTTATGAGAGCATTGAAAGTTGCATTTTGGTGCATTCAAGATGAAGTTGTCACAAGACCGACGATGGGCGACATCGTGAGGATGTTGGAAGGATCGATGGAAGTTGACATGCCGCCAATGCCACAGACAGTGGTGGAGCTGGTTGAGGAAGGATTGGATCAAGTCTATAGAGCCATGAAAAGAGACATCAACCAGTCAAGTTCCTTCACCATTAATAGCCATCCTTCATCTTCTTTGGCTACCTGCAGTCATTCCACAATCTCTCCAAGATAGTTAAAATGTAACACACAACAAAGTTTTGTTTAGAACATCAGAAGTAGGATCCTGCAGTCATTCCACAATCTCTCCAAGATAGTTAAAATGTAACACACAACAAAGTTTTGTTTAGAACATCAGAAGTAGGATTCTGCTCTGTATCTATAGCCAATATATATTTTTTTT 2755 44.1 MAVGRANSLFLAFAFAWLIRACMAGQIGFRSRLLASDRNQVWFSDNGTFAFGFSPVSSSGGNVGDRFLLAIWFAELPGDRTVIWSANSSSALRLSDHVSFLSQSFTYRNSPVSKNAIVELDGTGNLVLTNDGSAAVWSSNTSGDGAEFAVMSESGNFILFNAERSPVWQSFSHPSDTLLPNQPLSVSLELTTSKSPSHGGYYTLKMLQQRTTLKLALTFNLPESYEGLPESYANYSYWSAPEISNVTGEVIAVLDEGGSFGVVYGDSSNGAVYVYKNDNDNGGLSASTNQSIRNVRTQVVRRLTLESNGNLRLYRWDDDVNGSRQWVPEWAAVSNPCDIAGICGNGICYLDKSKTNASCSCLPGTFKDNGGSQCFENSSSVGKCGGQNHQSPSTQYRISPVQQTNYYYSEFSVIANYSDINTVSKCGDACLTDCECVASVYGLDDEKPYCWVLRSLDFGGFEDAGSTLFVKVKSNGSIPEANGPGAEGDSSGSAKEKATVRTNNFSEVLGTGGFGSVYKGSLGDGTLVAVKKLDRVFPHGEKEFITEVNTIGSMHHMNLVRLCGYCSEGSHRLLVYEFMKNGSLDKWIFPTHHNQDRILDWSTRFHVAVGTAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSHVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSFDAEDFFYPGWAYKEMRNGTHFKVADRRLEGAVEEEELMRALKVAFWCIQDEVVTRPTMGDIVRMLEGSMEVDMPPMPQTVVELVEEGLDQVYRAMKRDINQSSSFTINSHPSSSLATCSHSTISPR 836
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 29097358 29103678 + XM_039046219.1 Bhi01g01426 24199

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g01426 836 Pfam S-locus glycoprotein domain 290 364 IPR000858 GO:0048544
Bhi01g01426 836 SMART serkin_6 503 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi01g01426 836 PANTHER OS07G0415500 PROTEIN 500 836 - -
Bhi01g01426 836 PANTHER OS07G0415500 PROTEIN 10 498 - -
Bhi01g01426 836 ProSiteProfiles Bulb-type lectin domain profile. 34 172 IPR001480 -
Bhi01g01426 836 Pfam Protein kinase domain 506 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi01g01426 836 Pfam D-mannose binding lectin 108 188 IPR001480 -
Bhi01g01426 836 ProSiteProfiles Protein kinase domain profile. 503 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi01g01426 836 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 500 836 - -
Bhi01g01426 836 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 10 498 - -
Bhi01g01426 836 Gene3D - 34 173 IPR036426 -
Bhi01g01426 836 SUPERFAMILY alpha-D-mannose-specific plant lectins 106 208 IPR036426 -
Bhi01g01426 836 SMART blect_4 31 174 IPR001480 -
Bhi01g01426 836 Gene3D Phosphorylase Kinase; domain 1 493 578 - -
Bhi01g01426 836 SUPERFAMILY Protein kinase-like (PK-like) 499 776 IPR011009 -
Bhi01g01426 836 CDD STKc_IRAK 509 777 - -
Bhi01g01426 836 CDD B_lectin 44 174 IPR001480 -
Bhi01g01426 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Bhi01g01426 836 PIRSF SRK 496 827 IPR024171 GO:0004674
Bhi01g01426 836 PIRSF SRK 2 501 IPR024171 GO:0004674
Bhi01g01426 836 MobiDBLite consensus disorder prediction 813 836 - -
Bhi01g01426 836 ProSitePatterns Protein kinases ATP-binding region signature. 509 532 IPR017441 GO:0005524
Bhi01g01426 836 Gene3D Transferase(Phosphotransferase) domain 1 579 793 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g01426 - - - bhj:120087538 1687.93
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01426 Bhi-Chr1:29097358 Bhi01g01428 Bhi-Chr1:29097359 0 dispersed
Bhi01g01426 Bhi-Chr1:29097358 Bhi01g01427 Bhi-Chr1:29097359 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g814 . . . . . . . . . . . . . . . . . Bhi01g01426 . . . . . . . . . . . . . Cone1ag1203 Cone5ag0905 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa03g02176 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008718 0 4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 2 2 35
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87328 PF00069 Pkinase 2.20E-46 CL0016 Bhi PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi01g01426 Bhi_Chr01 FPKM 1.053378 0.0 1.351924 1.088875 1.682539 1.744396 1.068784 1.644036 2.056408 1.889631