Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g01427 AAGTAGTTTAAAGCCCATTAATAGCTGAAGAATTATGCCCAATTGTTGATCTTCGTTTATTTTTTTGGCCTTCTAATGGCTGTAGGCCGTGCCAATTCTTTGTTTTTGGCTTTCGCTTTTGCATGGCTCATTAGGGCTTGCATGGCCGGTCAAATTGGTTTTAGATCGAGGTTGCTAGCTAGTGATCGAAATCAAGTGTGGTTTTCTGATAATGGCACATTTGCATTTGGATTTAGTCCGGTGAGTAGTAGCGGTGGCAACGTCGGTGACCGATTTCTACTTGCCATTTGGTTTGCGGAGCTTCCGGGGGATCGAACTGTAATTTGGTCGGCTAATAGTTCCTCTGCTCTTCGTTTAAGCGACCATGTTTCATTTCTTTCTCAATCATTTACTTATAGAAACTCTCCAGTCTCCAAGAATGCGATTGTGGAACTCGACGGCACCGGGAACCTCGTCCTCACCAACGACGGCAGCGCCGCCGTCTGGTCCTCCAACACCTCTGGAGATGGAGCAGAGTTTGCTGTCATGTCGGAATCCGGAAATTTCATTCTCTTCAACGCTGAACGAAGCCCTGTTTGGCAGAGCTTTTCACACCCTTCTGATACCCTTCTCCCAAATCAACCTCTATCAGTCTCTTTAGAGCTCACAACATCCAAATCCCCTTCCCATGGCGGATATTATACCCTAAAAATGCTCCAACAACGCACCACTCTCAAACTCGCCTTGACATTCAATTTGCCTGAAAGTTACGAGGGTTTGCCTGAATCTTACGCAAATTACTCATACTGGTCGGCCCCTGAAATTTCCAATGTAACGGGGGAAGTCATCGCTGTTTTAGACGAAGGTGGAAGCTTCGGTGTTGTGTATGGGGACTCCTCTAATGGTGCGGTTTATGTTTACAAAAACGATAACGATAATGGCGGATTATCGGCATCGACAAATCAGTCTATTCGTAATGTACGGACACAAGTTGTTCGACGATTGACCTTAGAGAGTAATGGGAACTTGCGTTTGTATCGATGGGATGATGATGTTAATGGGTCTCGTCAATGGGTGCCGGAATGGGCGGCGGTTTCAAATCCTTGTGATATTGCTGGAATTTGTGGAAATGGGATTTGCTATTTGGATAAAAGCAAGACGAATGCGTCTTGTTCTTGCTTGCCGGGGACTTTCAAGGACAACGGCGGCAGCCAATGCTTTGAAAATTCATCGTCGGTTGGGAAATGCGGTGGCCAAAATCATCAATCTCCCTCGACTCAGTACAGGATTTCTCCTGTTCAGCAAACAAATTACTATTATTCTGAGTTCTCTGTAATTGCAAATTACAGCGATATCAACACAGTATCGAAATGTGGTGATGCTTGCTTAACTGATTGTGAGTGTGTTGCTTCTGTTTATGGGCTTGACGATGAGAAGCCTTACTGTTGGGTGTTGAGAAGCTTAGATTTCGGTGGATTTGAGGATGCTGGTTCGACTCTCTTTGTGAAGGTCAAGTCTAATGGCTCAATACCAGAAGCCAACGGGCCAGGAGCTGAAGGAGATTCTTCAGGAAGTGCTAAAGAAAAGGCTACGGTAATTCCTATTGTTCTGAGTATGGCTTTTCTGATTGGGCTGCTGTGTCTGTTGTTATATTATAATGTTCATAGAAGAAGAGCTATGAAGAGAGCCATGGAGAACTCTCTCATCTTGTCTGGTGCTCCCATGAGTTTTACCCACCGTGATTTGCAGGTCCGGACGAACAATTTCTCCGAGGTTCTTGGAACAGGGGGATTTGGTAGTGTATATAAAGGAAGCCTTGGAGATGGGACTCTGGTAGCTGTGAAGAAACTTGACAGAGTTTTCCCTCATGGAGAGAAGGAGTTTATAACCGAAGTTAACACAATTGGATCTATGCATCACATGAACTTGGTTCGGCTCTGCGGATACTGCTCAGAAGGATCGCATAGGCTTTTAGTTTATGAGTTTATGAAAAATGGGTCATTGGACAAGTGGATATTTCCAACGCATCATAATCAAGACAGAATTTTAGATTGGTCGACTCGGTTTCACGTAGCTGTTGGCACAGCACAAGGGATTGCTTATTTCCATGAGCAATGCAGGAATAGGATCATACACTGTGATATCAAGCCAGAAAACATTCTATTGGATGAAAACTTTTGTCCCAAAGTTTCAGACTTTGGTCTGGCTAAGCTGATGGGAAGAGAGCACTCACATGTTGTAACAATGGTGAGAGGGACAAGAGGATATTTGGCTCCAGAGTGGGTTAGTAATCGCCCAATCACTGTTAAAGCCGATGTTTATAGCTATGGAATGCTTCTCTTGGAGATTGTTGGTGGCAGGAGAAACCTTGATATGTCTTTTGATGCTGAAGACTTCTTCTATCCTGGTTGGGCTTACAAGGAGATGAGGAATGGGACGCATTTCAAAGTTGCAGACAGGCGACTAGAGGGTGCAGTGGAGGAAGAAGAGCTTATGAGAGCATTGAAAGTTGCATTTTGGTGCATTCAAGATGAAGTTGTCACAAGACCGACGATGGGCGACATCGTGAGGATGTTGGAAGGATCGATGGAAGTTGACATGCCGCCAATGCCACAGACAGTGGTGGAGCTGGTTGAGGAAGGATTGGATCAAGTCTATAGAGCCATGAAAAGAGACATCAACCAGTCAAGTTCCTTCACCATTAATAGCCATCCTTCATCTTCTTTGGCTACCTGCAGTCATTCCACAATCTCTCCAAGATAGTTAAAATGTAACACACAACAAAGTTTTGTTTAGAACATCAGAAGTAGGATCCTGCAGTCATTCCACAATCTCTCCAAGATAGTTAAAATGTAACACACAACAAAGTTTTGTTTAGAACATCAGAAGTAGGATTCTGCTCTGTATCTATAGCCAATATATATTTTTTTT 2910 43.95 MAVGRANSLFLAFAFAWLIRACMAGQIGFRSRLLASDRNQVWFSDNGTFAFGFSPVSSSGGNVGDRFLLAIWFAELPGDRTVIWSANSSSALRLSDHVSFLSQSFTYRNSPVSKNAIVELDGTGNLVLTNDGSAAVWSSNTSGDGAEFAVMSESGNFILFNAERSPVWQSFSHPSDTLLPNQPLSVSLELTTSKSPSHGGYYTLKMLQQRTTLKLALTFNLPESYEGLPESYANYSYWSAPEISNVTGEVIAVLDEGGSFGVVYGDSSNGAVYVYKNDNDNGGLSASTNQSIRNVRTQVVRRLTLESNGNLRLYRWDDDVNGSRQWVPEWAAVSNPCDIAGICGNGICYLDKSKTNASCSCLPGTFKDNGGSQCFENSSSVGKCGGQNHQSPSTQYRISPVQQTNYYYSEFSVIANYSDINTVSKCGDACLTDCECVASVYGLDDEKPYCWVLRSLDFGGFEDAGSTLFVKVKSNGSIPEANGPGAEGDSSGSAKEKATVIPIVLSMAFLIGLLCLLLYYNVHRRRAMKRAMENSLILSGAPMSFTHRDLQVRTNNFSEVLGTGGFGSVYKGSLGDGTLVAVKKLDRVFPHGEKEFITEVNTIGSMHHMNLVRLCGYCSEGSHRLLVYEFMKNGSLDKWIFPTHHNQDRILDWSTRFHVAVGTAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSHVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSFDAEDFFYPGWAYKEMRNGTHFKVADRRLEGAVEEEELMRALKVAFWCIQDEVVTRPTMGDIVRMLEGSMEVDMPPMPQTVVELVEEGLDQVYRAMKRDINQSSSFTINSHPSSSLATCSHSTISPR 888
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 29097359 29103678 + XM_039044716.1 Bhi01g01427 24200

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g01427 888 ProSitePatterns Protein kinases ATP-binding region signature. 561 584 IPR017441 GO:0005524
Bhi01g01427 888 SMART serkin_6 555 827 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi01g01427 888 PANTHER OS07G0415500 PROTEIN 10 888 - -
Bhi01g01427 888 Pfam Protein kinase domain 558 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi01g01427 888 ProSitePatterns Serine/Threonine protein kinases active-site signature. 678 690 IPR008271 GO:0004672|GO:0006468
Bhi01g01427 888 SUPERFAMILY alpha-D-mannose-specific plant lectins 106 208 IPR036426 -
Bhi01g01427 888 Pfam D-mannose binding lectin 108 188 IPR001480 -
Bhi01g01427 888 Gene3D - 34 173 IPR036426 -
Bhi01g01427 888 ProSiteProfiles Bulb-type lectin domain profile. 34 172 IPR001480 -
Bhi01g01427 888 Gene3D Transferase(Phosphotransferase) domain 1 631 845 - -
Bhi01g01427 888 Pfam S-locus glycoprotein domain 290 364 IPR000858 GO:0048544
Bhi01g01427 888 CDD STKc_IRAK 561 829 - -
Bhi01g01427 888 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 10 888 - -
Bhi01g01427 888 SMART blect_4 31 174 IPR001480 -
Bhi01g01427 888 MobiDBLite consensus disorder prediction 865 888 - -
Bhi01g01427 888 SUPERFAMILY Protein kinase-like (PK-like) 535 828 IPR011009 -
Bhi01g01427 888 CDD B_lectin 44 174 IPR001480 -
Bhi01g01427 888 PIRSF SRK 2 879 IPR024171 GO:0004674
Bhi01g01427 888 Gene3D Phosphorylase Kinase; domain 1 519 630 - -
Bhi01g01427 888 ProSiteProfiles Protein kinase domain profile. 555 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g01427 - - - bhj:120087538 1803.88
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01427 Bhi-Chr1:29097359 Bhi01g01429 Bhi-Chr1:29097564 0 dispersed
Bhi01g01426 Bhi-Chr1:29097358 Bhi01g01427 Bhi-Chr1:29097359 0 tandem
Bhi01g01427 Bhi-Chr1:29097359 Bhi01g01428 Bhi-Chr1:29097359 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g816 . . . . . . . . . Cmo18g01317 . . . . . . . Bhi01g01427 . . . . . . . . . . . . . . . . . . . . Cme06g01057 . . . . . . . . . . . . Cma18g01288 . Car18g01206 . . . . . . . . . Cla05g00933 . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008718 0 4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 2 2 35
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87329 PF00069 Pkinase 2.40E-46 CL0016 Bhi PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi01g01427 Bhi_Chr01 FPKM 0.0 0.0 0.308477 0.0 5.242862 5.314331 3.964241 0.0 0.230625 0.0