Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g01589 ATGGCGGTTTCCGACCAATTCGCCTCCATCATCGAGGCACCGGTTCAGCGGTCAAATTTTGCGGTGAAACGTCGGAGAAGGCGTAGAAGTAAGACGCCGTCGAAAGATGAACATTTGGAGATCATTTCATCAGAAAATGAGGAAGGAATGAGAAACGAGAGTCTCTCACAAAATTACTCCGAAATAGAACTTGAAACTCAAATATCCTATCTAAGCGATGATTCCAGAACATACCAAGCGGAGAGGATTTGGGACGAAAGCGTGATCCGGCATGCGCTACTGTACAGAGCGGCGCTAATGGGTAAATGGGAGGATGCAGAAGCCATTTTCAGCCAAGATTCTGCAGCAATTGTGTCTAAGATCAACCTCTTGGAGGAGACCGCTCTCCATGTCGCCGTCGGCACCGGAAACAATTTGGATTTTGTGGAAAAGCTTGTGAAACTTATGTGTGAACGTTCGCTATCCCTTGAACTACAAGATTCACACGGAAATACTGCACTTGCTATGGCCGCCATCGTTGGCAATGTTGAGGCTGCAAAAATCTTAGTCAGCAGAAACGAGGAGCTACCTTCGGTGAAGAATAAGCTCAATTACTCTCCTCTTCTACTCGCAGCAAAATATGGGCACAGGGACATCATTTTGTACCTTCTAACCGTAACCAATGATGAAGAGGTGTTTACTGCTCAAGCTGGTGCTAGGCTTCTCAACTTTCTCATTACGTTTGATTTCTATGATATTGCTCTTGATATATTGTACAGTCATCCAATTTTGGCCATCGAACAAGATCATTATGGGGTGTATGCTCTACAAATGATCGCAGAAAAACCAGACGTGTTTGAGACTGGAACTCAGCTGGGGTTTTGGCAACGCTTACTTAATCGATGTTGGTGCGGCATTGTACGACTGCTTGATGCTTTCCTGCCCAAGCAAGGCTCAGATGTGGAAAATCCTCTTGAAAACTCAAACAATACAGGGGAGTTGGTCCCATCAAGTAAAATCTCTGGGGCTGCTTTACAATTTCAACGAGAACTACAATGGTTTAAGGAAGTTGAAAAGTTAGTACAACCTTCATATAGAAGTATGAAAAACAAAGACGGGAAAACACCAAGGATGATATTCAGTGAAAGACATGAAGGGTTAGTTCATCAAGGTGAGAAATGGATGAAGATCACTGCTTCATCATGCACAGTTGTTGCAGCACTGATTGCAACAGTGGCATTCACAGCAATTTTCACGGTACCTGGTGGCAACGACAACGACCAAGGCATCCCAATTTTCCTATATAACAAGTCTTTCATGGTTTTTGCAGCAGCAGATGCATTAGCATTGATCACTTCCTCTGCTTCAGTAATGATGTTTCTAGGAATACTCACTTCCCGTTACGCAGAAGACGATTTTCTGAGGGCATTACCAACAAGATTAATTATTGGTCTCGTCTCGTTGTTCATCTCTATATCTTCCATGGTGGCAGCCTTTGGTGCATCCTTTTACCTAGTTCTTGTTCATCAAATGAAACTAGTCTGGGTTCCAGTGATAGTCTTTGCCTTTATACCTGTTGTCTTATTTGCTTTGTCGCAGTTTCCTCTTTTGGTTCAAATGATTTCTTCCACATTTGGGCGCAGCATTTTCGGTTTGCAAAGTATGGAAGTATTTCTCTAG 1659 43.28 MAVSDQFASIIEAPVQRSNFAVKRRRRRRSKTPSKDEHLEIISSENEEGMRNESLSQNYSEIELETQISYLSDDSRTYQAERIWDESVIRHALLYRAALMGKWEDAEAIFSQDSAAIVSKINLLEETALHVAVGTGNNLDFVEKLVKLMCERSLSLELQDSHGNTALAMAAIVGNVEAAKILVSRNEELPSVKNKLNYSPLLLAAKYGHRDIILYLLTVTNDEEVFTAQAGARLLNFLITFDFYDIALDILYSHPILAIEQDHYGVYALQMIAEKPDVFETGTQLGFWQRLLNRCWCGIVRLLDAFLPKQGSDVENPLENSNNTGELVPSSKISGAALQFQRELQWFKEVEKLVQPSYRSMKNKDGKTPRMIFSERHEGLVHQGEKWMKITASSCTVVAALIATVAFTAIFTVPGGNDNDQGIPIFLYNKSFMVFAAADALALITSSASVMMFLGILTSRYAEDDFLRALPTRLIIGLVSLFISISSMVAAFGASFYLVLVHQMKLVWVPVIVFAFIPVVLFALSQFPLLVQMISSTFGRSIFGLQSMEVFL 552
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 32864861 32877059 - XM_039030876.1 Bhi01g01589 24362

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g01589 552 PANTHER ANKYRIN REPEAT-CONTAINING DOMAIN, PGG DOMAIN PROTEIN-RELATED 111 276 - -
Bhi01g01589 552 PANTHER ANKYRIN REPEAT-CONTAINING DOMAIN, PGG DOMAIN PROTEIN-RELATED 325 544 - -
Bhi01g01589 552 MobiDBLite consensus disorder prediction 33 47 - -
Bhi01g01589 552 Pfam Domain of unknown function 385 499 IPR026961 -
Bhi01g01589 552 Gene3D - 68 233 IPR036770 -
Bhi01g01589 552 SMART ANK_2a 162 191 IPR002110 GO:0005515
Bhi01g01589 552 SMART ANK_2a 196 225 IPR002110 GO:0005515
Bhi01g01589 552 SMART ANK_2a 124 154 IPR002110 GO:0005515
Bhi01g01589 552 Pfam Ankyrin repeats (3 copies) 129 217 IPR002110 GO:0005515
Bhi01g01589 552 MobiDBLite consensus disorder prediction 23 54 - -
Bhi01g01589 552 ProSiteProfiles Ankyrin repeat profile. 162 194 IPR002110 GO:0005515
Bhi01g01589 552 SUPERFAMILY Ankyrin repeat 90 275 IPR036770 -
Bhi01g01589 552 PANTHER CASKIN 325 544 - -
Bhi01g01589 552 PANTHER CASKIN 111 276 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g01589 - - - bhj:120076970 1049.27
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01589 Bhi-Chr1:32864861 Bhi12g00807 Bhi-Chr12:24333158 1.06E-29 dispersed
Bhi01g01588 Bhi-Chr1:32843623 Bhi01g01589 Bhi-Chr1:32864861 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g773 . . . . Bpe03g00157 . . . Cmo16g00103 . . . . . Sed13g0543 . Cpe14g00080 Bhi01g01589 Tan01g0786 . . . Mch10g0553 . . . . . . . . Cone1ag1195 . . Cone15ag0060 Lsi05g01188 . . . . Blo09g00058 . . . . . . . . . Cma16g00096 . Car16g00086 . . . . . . . . . . Cla05g00919 Cam05g1007 Cec05g1011 Cco05g1007 Clacu05g0995 Cmu05g0950 Cre05g1031 . Csa03g01752 Chy06g00981 .
Vvi16g779 . . . . . . . . . . . . . . Sed13g0543 . . Bhi01g01589 Tan01g0786 . . . Mch10g0553 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000053 7 13 4 5 0 9 1 8 10 14 9 9 8 14 25 9 10 1 8 10 21 9 4 11 15 19 13 25 15 12 318
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi01g01589 Bhi_Chr01 FPKM 33.586327 37.006313 0.472807 0.0 0.775549 0.0 0.620916 0.0 0.0 0.0