Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g01645 TATAATCTTCCATAACTCTCAACAGTCTAAGAGATCAGAAGAAAAAACAATCATATGGAGATTGATCTATCACTCAAAATAGATCATCACAAGGAAGAACTTTTCAAACACAAAAAAGTTCAAGAAGAGGAAGAAGAGGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAAATTGATGATCATATTGTTGCTTCTACATCTAGTAATTTGAAATTGTTTTTGCCACACAACATTAATATAGGAGAGATTTCAGAGTTACAAATGGAAATGGATAGAATGAAAGAAGAGAACAAGGTGTTGAGAAAAGCTGTGGAACAAACAATGAAAGATTATTATGATCTTGAAATGAAAATTGGTTTCATTCAACAAAACAATAGTAACCTCAACAACAAGGACTCTCACAACTTCCTATCATTTCATGGAAATGAGAACAAGAGACGTGAAGAACCAACAAAACCAGACCTCGAGCTCGGAGAAATGGCGAAGAAGAAGAGACAAGTTCGGTCACCATCGAAGGAGGACGAGATGAGAAAGAGTGAATTAGGGTTATCATTAGGGCTCCACACAAACAACAATGATTTGGATCAAGAAGATAATCATAAAGAATTATTACAAGAAGAAACAAGAGAAAAGAAGAAGGAAGATTCAATAATAATGTCCAACTTCAACTCAATCCAAAACAAGCCACAAAGGCCTGAATTGCAAGCAATGGCACCCCCACAAAACAGAAAAGCTAGGGTTTCTGTGAGAGCAAGATGTGAATCTGCCACTATGAACGATGGTTGTCAATGGAGGAAGTATGGTCAAAAAATTGCGAAGGGAAATCCATGTCCTCGAGCCTATTATCGTTGCACAGTTGCACCAGGATGCCCAGTCAGAAAACAAGTGCAAAGATGTTTAGAAGACATGTCAATTCTTATAACAACGTACGAAGGAACACATAATCATCCACTCCCTGTTGGAGCAACAGCCATGGCTTCCACAGCTTCTGCAGCAGCTTCCTTTATGCACTTAGACTCAACTAATAATAACATTAATCTTTCTTCTCTTCCAAACCCTAATATTCTAAACTCTTCTTCTTCTTCCTATTCTCCAACTTTCCTCCAAACTCAAAACCCTAATAATCATCAACCCTCAACAAACAACACCTTTTACACTCCATTAATCCCCACCTCTTCAACCTCACACTTCCCCCATTCCTTTAATTACCCTACCAACTTTCAACCTAATCATCTTTTCAATCCTCTCCACCGCCGCACGTGGAAACCGGCCGACAATAATAAGCCACCGTTCACACCCGAGAGTGTCTCCGCCATTGCTTCTGACCCTAAGTTTCGAGTTGCCGTTGCGGCCGCTATTTCTTCGCTCATTAACAAAGAGAATAACCACATGACAGCAATGAATCCTATCGAAGATTCTTCTTCTTTCAGTCCTAGTAAAGATGGCAAAGGCGGCGGTAGCGACAGCGACGGAGGAAACAAAAAATTGGTTGTTGAGTCCCTCTCATCAAATGGTAATTAGGCTCTTTTCAATGGTGGAAATTTCCATTTTTTGAGGGAGGTTCAGAGTTAGGGTTGTTTAATCATGAAATGGTTAAGATTTTTTTTTTTCTTTTTTGTTCTCTGTTTGATCCAAATTTGTATTTAAATTTGTAGTTTTTCTTACTTTTTTCTTTTCTTTCCATGATTTGATTTTCTGATAAGAATTTTGTAAGA 1715 38.13 MEIDLSLKIDHHKEELFKHKKVQEEEEEEEEEEEEEEEEIDDHIVASTSSNLKLFLPHNINIGEISELQMEMDRMKEENKVLRKAVEQTMKDYYDLEMKIGFIQQNNSNLNNKDSHNFLSFHGNENKRREEPTKPDLELGEMAKKKRQVRSPSKEDEMRKSELGLSLGLHTNNNDLDQEDNHKELLQEETREKKKEDSIIMSNFNSIQNKPQRPELQAMAPPQNRKARVSVRARCESATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMASTASAAASFMHLDSTNNNINLSSLPNPNILNSSSSSYSPTFLQTQNPNNHQPSTNNTFYTPLIPTSSTSHFPHSFNYPTNFQPNHLFNPLHRRTWKPADNNKPPFTPESVSAIASDPKFRVAVAAAISSLINKENNHMTAMNPIEDSSSFSPSKDGKGGGSDSDGGNKKLVVESLSSNGN 488
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 34473178 34478516 + XM_039050480.1 Bhi01g01645 24418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g01645 488 MobiDBLite consensus disorder prediction 120 163 - -
Bhi01g01645 488 Gene3D WRKY domain 225 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi01g01645 488 SMART WRKY_cls 240 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi01g01645 488 PANTHER WRKY TRANSCRIPTION FACTOR 9-RELATED 2 455 - -
Bhi01g01645 488 MobiDBLite consensus disorder prediction 448 488 - -
Bhi01g01645 488 MobiDBLite consensus disorder prediction 205 228 - -
Bhi01g01645 488 ProSiteProfiles WRKY domain profile. 235 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi01g01645 488 MobiDBLite consensus disorder prediction 448 464 - -
Bhi01g01645 488 Pfam WRKY DNA -binding domain 241 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi01g01645 488 MobiDBLite consensus disorder prediction 113 180 - -
Bhi01g01645 488 MobiDBLite consensus disorder prediction 26 42 - -
Bhi01g01645 488 Coils Coil 176 196 - -
Bhi01g01645 488 MobiDBLite consensus disorder prediction 17 42 - -
Bhi01g01645 488 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 2 455 IPR044810 GO:0003700
Bhi01g01645 488 SUPERFAMILY WRKY DNA-binding domain 233 301 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi01g01645 488 Coils Coil 65 92 - -
Bhi01g01645 488 Coils Coil 9 46 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01645 Bhi-Chr1:34473178 Bhi05g01347 Bhi-Chr5:47294430 4.46E-51 dispersed
Bhi08g01407 Bhi-Chr8:41799321 Bhi01g01645 Bhi-Chr1:34473178 2.39E-51 dispersed
Bhi08g01408 Bhi-Chr8:41799321 Bhi01g01645 Bhi-Chr1:34473178 5.29E-51 dispersed
Bhi01g01645 Bhi-Chr1:34473178 Bhi05g01345 Bhi-Chr5:47294430 5.20E-51 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
152 PF03106 WRKY 2.00E-24 CL0274 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g01645 - - cmo:103496139 650.588