Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g01676 TCATCATTTACCCTTTTCATTGTGTTTAGCTATGGAAGTAAATAACAATGAATTAGTATGGAGTAAACACGATCAAAGGAATCTAATTCCCTTTACATTGAGACCTATTACAATTGGTACGTGAATGTGAACTCATAATGATTACGACAATTTTAATTACGGAGCAGTAAACGTGGTCGAAATACATTAAATAGAGACAAGCACATAGTGATGACTTGATTGAAGAATACTTGGGTACAGTTGAATACACCCGCCCGTGTACCGGCATAAGTAACTAAAGCTAGTTCCAAGTGTAACTAGGGATAAACCATGGTTAGGTTAAAGAAATAGTTGCACCACACGTGTGGGGGAGAAGTCAGATAAGGGGCAGAGGAACAGAGTTACAGAAGGAGAAGGCAGTGTTTGTTTTCTCTTTTTATCTCTAAAACTCTCTGTTTTGAGTGTTGGGTATGTCTCTCTGTTCCATTCAATTTTAAGAGAGAAGAAGAAACAGAGTCAAAAAAAGGTAAGACTGAAAAATTTGCAGAGTGGTCAGATTTGTTAGTATTAGTATTAGTAGTTCGTCCCCCACTTGTTTGACAAAATTTCTAGCAGAGAGTAAATAGTTATAGAGAAAGAGAATCAAAGCATAAGAAAACATGCCTGGGACTGGGAGTGTTGCTGTTGAACCTTTGGATTTGAGCGTACACATTCCATATCATTTCAGATGCCCAATTTCTCTTGAGCTCATGCGTGATCCTGTCACCGTCAGCACCGGTCAGACCTACGACCGTTCAAGCATAGAGTCATGGGTCGCCACCGGCAACACCACTTGTCCGGTCACTAGGGCTCCACTCACCGACTTCACGCTCATCCCTAACCATACACTGCGCCGGTTAATCCAGGANNNNNNNNNNNNNNNNNNNNACCATACACTGCGCCGGTTAATCCAGGACTGGTGCGTTGCGAATCGGTCTTACGGCGTTGAGCGGATTCCGACTCCGAAGCAACCGGCGGAACCGTCTTTGGTTCGGTCTTTGCTTAGCCAAGCTTCGTCGAGATCGAGTGGTTTGAATTTGAGAATCTCGGCTTTGCGTCGGTTGAAAGGACTCGCCCGTGACTCGGATAAGAATCGGTCTCTGATTTCTTCGCTTAATGCTCGTGAAATTCTTCTGGATGTTGTGTTTTCGAATTTGGATTCGGATTCGGATTCGTTTTCACCTGATTTGAGCCGCGAATCGCTTGCGCTTCTTGTGATGTTACCGCTGACGGAATCTGAGTGTGTTCTTGTTGCGTCTGATCCGCAACGGATTGGTTATCTGTCACATCTTCTGTTTGATTCTTCGATTGAAGTCCGAATCAATGCCGCGGCGTTGATTGAAACTGTGATTGCCGGAACTCGAGCGTCGGAGCTTCGAAGCCAAATTTGTGGAATCGATGAATTGTTTGAAGGCGTAGTCGAAATTCTCAGAGATCCAACGGCGTATCCACGAGCACTCAAAGTCGGAGTTAAAGCCTTATTCGCTCTCTGTTTGGTGAAACAAACCAGGCACAAGGCAGTTTCCGCCGGCGCCGCCGAGATTATCATCGACCGATTTCCCGATTTGGAGAAGTACGACGCTGAGCGAGCCCTAGCTACGATTGAACTCATTTGCAGAATTCCAACCGGTTGCGATGCGTTTGCAGCTCACGCGCTCACCGTTCCGCTTTTGGTGAAAGTTATTCTGAAGATCTCGGACAGAGCGACGGAGTCAGCTGTCGGAGCTCTGGTGTCGTTATGTTCGGCATCGGAGGAGAATCGGCGGGAGGCGGTGGCGGCGGGGATTTTAACACAGTTGTTGTTGCTGGTGCAAAGTGATTGTACGGAGCGAGTAAAACGGAAATCGCAGGTGCTGCTGAAGCTTCTTCGAGATTCATGGCCGCAAGAATCCGTTGGAAATTCCGACGATTATGGTTGCAGTGAAATTGTGGTACCGTTTTGTTAATTGTGGAGTTTAACATTTTGGATTCTCAAATCTCCATAGATTGTTGGGTAAGTTTGAAGATTCATCAAATGGAACAAAGAACAAAAACTACAGAGAAAGAGAGACAACAAATGGAAGAGATGAAGTTGCAATAGTTTTTCTGTATGTAATTTTTTGTACGTAAATTTTTTTTCCGCTTAATTTCTTTCAACAAAAAAAAAAAAAAAAAAAAAATCCATCTATCGTTAAGTTTTTATTTGTAAGATTTTTGACATTTGTTACATCATTTCCTCTTAATGATATTTTGACATGATTAATTTCCTCAAA 2270 43.04 MPGTGSVAVEPLDLSVHIPYHFRCPISLELMRDPVTVSTGQTYDRSSIESWVATGNTTCPVTRAPLTDFTLIPNHTLRRLIQXXXXXXXXHTLRRLIQDWCVANRSYGVERIPTPKQPAEPSLVRSLLSQASSRSSGLNLRISALRRLKGLARDSDKNRSLISSLNAREILLDVVFSNLDSDSDSFSPDLSRESLALLVMLPLTESECVLVASDPQRIGYLSHLLFDSSIEVRINAAALIETVIAGTRASELRSQICGIDELFEGVVEILRDPTAYPRALKVGVKALFALCLVKQTRHKAVSAGAAEIIIDRFPDLEKYDAERALATIELICRIPTGCDAFAAHALTVPLLVKVILKISDRATESAVGALVSLCSASEENRREAVAAGILTQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQESVGNSDDYGCSEIVVPFC 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 35187873 35190142 + XM_039019320.1 Bhi01g01676 24449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g01676 441 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 17 88 IPR013083 -
Bhi01g01676 441 SUPERFAMILY ARM repeat 123 416 IPR016024 -
Bhi01g01676 441 Pfam U-box domain 18 82 IPR003613 GO:0004842|GO:0016567
Bhi01g01676 441 SUPERFAMILY RING/U-box 15 83 - -
Bhi01g01676 441 CDD RING-Ubox_PUB 22 63 IPR045210 -
Bhi01g01676 441 Gene3D - 316 416 IPR011989 -
Bhi01g01676 441 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 90 437 - -
Bhi01g01676 441 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 9 83 - -
Bhi01g01676 441 SMART Ubox_2 21 84 IPR003613 GO:0004842|GO:0016567
Bhi01g01676 441 PANTHER WDSAM1 PROTEIN 90 437 IPR045185 GO:0061630
Bhi01g01676 441 PANTHER WDSAM1 PROTEIN 9 83 IPR045185 GO:0061630
Bhi01g01676 441 Gene3D - 110 313 IPR011989 -
Bhi01g01676 441 ProSiteProfiles U-box domain profile. 17 107 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01676 Bhi-Chr1:35187873 Bhi01g01678 Bhi-Chr1:35187901 0 dispersed
Bhi09g02587 Bhi-Chr9:70208718 Bhi01g01676 Bhi-Chr1:35187873 1.39E-19 dispersed
Bhi01g01676 Bhi-Chr1:35187873 Bhi01g01677 Bhi-Chr1:35187899 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g01676 - - bhj:120067754 795.808