Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g01768 TCTCTCTCTGGAATTCAATTTCTCCTTTTTTTCGCTGATTTTTGGATGTTTTCTTCTGTCGATTGAACAAGTGGACTTCATCGGTTACACTTTCCTTGCTGAAATCTGCAAGAACTTTGAAGAGAGAGAGTTGCACGTACCAATTAACCCCCACAAAAAAAATACCAAATCCAATACCCAACTCAGGGATATCTCTCCATTTATTGCGTTTGTTTTTGTGTTGATTTGGTATCCTTATTTGGAAATTGGACTCGACCCTCTCTGGATGCTATGTATTCTATTTATCCCATCTGTGATTTTCAATGTGTTGTACAAACGAGTACAGGCTGCGGGAATAAAAGTTCTAGCGGCTCCCGTTTTTGGGAATTTCAAGGGAAGAATAGAGAAGTTGTAGTTCTTTCATTCAGTGGGTATCTTAGTGGTTGGTCGGGATGGATTTTGTGACGGATGGTCGTGGGGGTTATGGGGGTGGGTCTGCTGATGATCAAGAAGGTTCTAATGATCGTAAGGGGAAAAAGACTTACCATCGTCATAATCCTTACCAGATTCAGCAGCTTGAGTCATTTTTCAGGGCATGCCCACACCCTGATGAAAATCAGCGGCGCCAGCTGAGTCGAGAGCTTGGTCTTGAGACCAAACAGATCAAATTTTGGTTTCAAAACAAGAGGACTCAAACAAAGGCTCAGAATGAGCGAGCAGACAACTCTTCACTTCGGACAGAGAACGAAAAGATTCAATGCGAAAATCTTGCAATTAGAGAAGCGTTGAGGAATGTGATCTGTCCATCCTGTGGAGGTCCACCTTTTGGAGAAGAAGAACGGCAGCGCAATCTCCAAAAACTACGTCTTGAAAATTCTCACTTAAAAGAAGAGCATGAAAAAGTGTCTAACCTTCTTGCGAAGTACATTGGTAAACCAATATCACAACTTGAATCGCTATTGCCTGTTCTTGGATCTTCACTTGATTTGTCACCAAGAAGTTCCCTTACCCAAATAGGTGCAAGTCCTGCAGTCGATCTTATTTCTGATCCTATAATATTAGATGGAGCAGCAACACCCTACCAATCAAGAGGTATTAATGATTTGGAAAATGCTCTTATGTTGGAAACTGCTGCAACTGCCTTGGAAGAGTTAATCAGACTTTTGAGGATCGACGAGCCTTTGTGGATGAAGACCCTGAATGATGGGAGGTATGTTCTCCATCGTGACAGCTACGGAAAAATATTTCCTAGACCCAATCACTTCAAATCTTCTAGTGCTCGTACTGAATCATCAAAAGCTTCAGGAGTGGTGATAATGAGTGCAATTCAATTGGTTGATTTTTTTTTAGATGCGGATAAATGGACAGATCTTTTTCCAACCATCATTATAAATGCAGAGACATTTCATATTATTGACCCCGGGATGCCTGGAAATCGCAGTGGCGCTTTGCAGTTGATGTATCAACAAATGCACATCTTTTCACCCCTCGTATCTCCTCGAGACTTCTATTTCCTTCGACATTGTCAGCAGATTGAGCTTGGTGTCTGGGTAATAGTGGATGTTTCATATGAAATCTTAAAGGATTGTGTCACCTCTGCCCGCTGCTGGAGGCTTCCATCTGGGTGCTTGATTCAAGAAATGCCCAATGGTTGCTCTAAGATCACCTGGGTCGAGCATGTGGAAGTGGATGACAAAGCACAAACCCACCGTCTCTATCGAGATCTTGTGTTCAATACTATGGCATATGGAGCCGATCGATGGCTTTTCACTCTTCAAAGGATGTGTGAGAGATTGGCTTACACTTTCAGGGATTGTGCACCTAGCCATGAACTTGGAGGAGTGTTAACTTCTCCTGAAGGTAGGAGGAGCGTCATGAAGCTGTCATATAGAATGGTAAAAAATTTCTGTGGCATACTGAGGATGTCAGGTAAATTAGATTTCCCACAGTTATCCGAAGTGAACAACAGCGGTGTTCGAGTATCTGTTCGGATTAGCTCAGAACTGGGGCAGCCCAGTGGGACAGTCGTTAGTGCGGCAACATCTCTTTGGCTTCCCCTACCACCTGAAACCATCTTTAATTTCTTCCGGGATGAAAAGGCCAGAGTTCAGTGGGATGTTCTCTCTTATGGAAACCCTGTACATGAAATTGCACACATCTTAACAGGAGTTCATCCAGGAAACTCGATATCTATAATTCAGCAGCCGTTCATCCCAACTGAGAACAACATGCTGATTCTTCAAGAAAGCTGTATAGATTCACTAGGATCCTTGGTGATATATGCGCCCATTGACGTGCCTGCTATGAACATTGCAACAAGTGGTCAGGACCCATCAGAGATACCAATACTGCCATCAGGGTTCGTGATCACAGGGGATGGCCGTACTCATTCAGGAACCGAAGCTTCGACGAGTGCTACCTCGGGGAGGCCGAGCGGGTCTCTGTTAACCATAGCTTTCCAGATATTGGTGTCCAGTGTATCATCTTCAAAACAGCTGAATGTGGAGTCTGTGGCAACGGTGAATACTCTTATCAGTGCCACAGTTCAGAGGATAAAGGCTGCATTGAATTGTTCTGGCTTGGATTGATTTTTGTGGTGTGATGTGTGTGTTTGATTGCTGTAGGGCTCAAAACGAAATAGTTGGAACTTATTGGGTCATTATAAGCTTCTTTCAAAAGTTGGAACTTTGCTGTTTCATTAGATGATTTTTTTTCTTGAAATTTGAGTATGTAACAAATATTATAATCATTTTATAACATTGTGATTTGATTTTTTTTTTC 2760 42.54 MDFVTDGRGGYGGGSADDQEGSNDRKGKKTYHRHNPYQIQQLESFFRACPHPDENQRRQLSRELGLETKQIKFWFQNKRTQTKAQNERADNSSLRTENEKIQCENLAIREALRNVICPSCGGPPFGEEERQRNLQKLRLENSHLKEEHEKVSNLLAKYIGKPISQLESLLPVLGSSLDLSPRSSLTQIGASPAVDLISDPIILDGAATPYQSRGINDLENALMLETAATALEELIRLLRIDEPLWMKTLNDGRYVLHRDSYGKIFPRPNHFKSSSARTESSKASGVVIMSAIQLVDFFLDADKWTDLFPTIIINAETFHIIDPGMPGNRSGALQLMYQQMHIFSPLVSPRDFYFLRHCQQIELGVWVIVDVSYEILKDCVTSARCWRLPSGCLIQEMPNGCSKITWVEHVEVDDKAQTHRLYRDLVFNTMAYGADRWLFTLQRMCERLAYTFRDCAPSHELGGVLTSPEGRRSVMKLSYRMVKNFCGILRMSGKLDFPQLSEVNNSGVRVSVRISSELGQPSGTVVSAATSLWLPLPPETIFNFFRDEKARVQWDVLSYGNPVHEIAHILTGVHPGNSISIIQQPFIPTENNMLILQESCIDSLGSLVIYAPIDVPAMNIATSGQDPSEIPILPSGFVITGDGRTHSGTEASTSATSGRPSGSLLTIAFQILVSSVSSSKQLNVESVATVNTLISATVQRIKAALNCSGLD 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 37887225 37891587 + XM_039024452.1 Bhi01g01768 24541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g01768 711 SUPERFAMILY Homeodomain-like 14 86 IPR009057 -
Bhi01g01768 711 SUPERFAMILY Bet v1-like 218 449 - -
Bhi01g01768 711 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ROC8 9 708 - -
Bhi01g01768 711 SMART START_1 225 447 IPR002913 GO:0008289
Bhi01g01768 711 Pfam Homeodomain 28 83 IPR001356 GO:0003677
Bhi01g01768 711 Coils Coil 84 104 - -
Bhi01g01768 711 ProSiteProfiles START domain profile. 216 450 IPR002913 GO:0008289
Bhi01g01768 711 CDD START_ArGLABRA2_like 221 446 - -
Bhi01g01768 711 ProSitePatterns 'Homeobox' domain signature. 60 83 IPR017970 GO:0000981|GO:0006355
Bhi01g01768 711 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 9 708 IPR042160 -
Bhi01g01768 711 ProSiteProfiles 'Homeobox' domain profile. 25 85 IPR001356 GO:0003677
Bhi01g01768 711 Pfam START domain 227 447 IPR002913 GO:0008289
Bhi01g01768 711 Coils Coil 127 154 - -
Bhi01g01768 711 Gene3D - 225 430 IPR023393 -
Bhi01g01768 711 SUPERFAMILY Bet v1-like 468 645 - -
Bhi01g01768 711 MobiDBLite consensus disorder prediction 1 31 - -
Bhi01g01768 711 CDD homeodomain 28 86 IPR001356 GO:0003677
Bhi01g01768 711 Gene3D - 15 102 - -
Bhi01g01768 711 SMART HOX_1 27 89 IPR001356 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01766 Bhi-Chr1:37887225 Bhi01g01768 Bhi-Chr1:37887225 0 dispersed
Bhi01g01768 Bhi-Chr1:37887225 Bhi08g01980 Bhi-Chr8:57139252 0 dispersed
Bhi08g01981 Bhi-Chr8:57140052 Bhi01g01768 Bhi-Chr1:37887225 0 dispersed
Bhi01g01767 Bhi-Chr1:37887225 Bhi01g01768 Bhi-Chr1:37887225 0 tandem
Bhi01g01768 Bhi-Chr1:37887225 Bhi01g01769 Bhi-Chr1:37887225 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
169 PF01852 START 1.40E-37 CL0209 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g01768 K09338 - csv:101205899 1295.8