Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g01815 CCTATTATTATTCCATGAAAATATAGTTTGAGTTCCTTCCAATTAGTGAAACTAACAAAACTTTCCTCATAAAAAGGAAGAACAAAGAGGGAACTAATCAAATCAAAGGGAGAAATTCAACTTTCAAGCAGGAAAATCCGTGATATTGTTCTAATCAGAAGCCTTCTTTCTTCTCTCAGAATCTGAGAATAATCAATGGCGACGAAGATCGACGGAATCGAAGAGGAAGAAATTTCAAAGCTCGAAGAAGGCACTCTAGTTTCCGCCGTCGCCCGTCTCTGTCCTTCCACCTCTGTCGTCATCATCCAAAAGGTTATCGCGGAGGTGATCGGAACGTACTTCGTGATCTTCGCCGGATGTGGAGCGGTGGCGGTGAACAAAATTTACGGATCAGTGACGTTTCCGGGAATCTGTGTGGTTTGGGGATTGATTGTGATGGTAATGGTGTATTCGGTGGGACATATCTCAGGAGCGCACTTCAATCCTGCTGTTACTCTCACCTTCGCCTTTTTCCGTCGCTTCCCCTTCTGGCAGGTACCAATATACGTAGGAGCTCAACTAATGGGGTCCCTTCTGGCAAGCTGCACATTGGAACTGATGCTTGAAGTGACTCCGGAAGCCTTCTTTGGGACGGAGCCCGTTGGATCAAATCTTCAATCTTTGGTTCTCGAAATTATCATCACCTTTCTCTTGATGTTTGTCATTTCTGGTGTCTCCACTGATAACAGAGCCGTAGGAGAATTCGCCGGAATTGTGGTTGGAATGACCATTCTCTTGAATGTTTTCGTCGCCGGGCCGATTTCAGGAGCTTCTATGAATCCAGCTAGGAGCATTGGACCAGCAATAGTGAAACGGCAGTTCAAAGGATTATGGGTTTACGTGGTAGGACCGTTGATCGGAGCGGTCGCCGGAGGGTTCGTCTATAACCTAATTAGATTCACAGACAAGCCACTGGGGGAGATCACCAGAAGCAGCTCATTCTTCACCGGCAGCCAGAAATCATAACCGCCGGAGACTCTTCACCACCACCATCTTTAAAGACTTTAACTTCAGAAGCAACAACCAAGCCTTGTGTGTTCATCATTCATTTATGTATATAATGTGTTAACTCAATTTATCATTTATTTAGGAAGTTTTTACCATTTTGCCAAAGCATTATTTATTTGATCAAATGATGCTTAGTTAAGACTTTTTGTTCTTTGGTTATTGAGAATTGGATTCATTCTGAGCAGTTAATCTAATCGATGGTGATCTTAAACTAG 1262 43.42 MATKIDGIEEEEISKLEEGTLVSAVARLCPSTSVVIIQKVIAEVIGTYFVIFAGCGAVAVNKIYGSVTFPGICVVWGLIVMVMVYSVGHISGAHFNPAVTLTFAFFRRFPFWQVPIYVGAQLMGSLLASCTLELMLEVTPEAFFGTEPVGSNLQSLVLEIIITFLLMFVISGVSTDNRAVGEFAGIVVGMTILLNVFVAGPISGASMNPARSIGPAIVKRQFKGLWVYVVGPLIGAVAGGFVYNLIRFTDKPLGEITRSSSFFTGSQKS 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 38832607 38838152 - XM_039026637.1 Bhi01g01815 24588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g01815 269 TIGRFAM MIP: MIP family channel proteins 42 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi01g01815 269 CDD MIP 38 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi01g01815 269 PANTHER AQUAPORIN NIP2-1 27 257 IPR034294 -
Bhi01g01815 269 Pfam Major intrinsic protein 32 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi01g01815 269 ProSitePatterns MIP family signature. 94 102 IPR022357 -
Bhi01g01815 269 Gene3D Glycerol uptake facilitator protein. 5 255 IPR023271 -
Bhi01g01815 269 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi01g01815 269 PRINTS Major intrinsic protein family signature 76 100 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi01g01815 269 PRINTS Major intrinsic protein family signature 113 132 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi01g01815 269 PRINTS Major intrinsic protein family signature 158 176 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi01g01815 269 PRINTS Major intrinsic protein family signature 189 211 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi01g01815 269 PRINTS Major intrinsic protein family signature 226 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi01g01815 269 PANTHER AQUAPORIN NIP4-1-RELATED 27 257 - -
Bhi01g01815 269 SUPERFAMILY Aquaporin-like 33 253 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00854 Bhi-Chr1:16094210 Bhi01g01815 Bhi-Chr1:38832607 3.94E-42 dispersed
Bhi01g01815 Bhi-Chr1:38832607 Bhi03g00001 Bhi-Chr3:15650 8.61E-110 dispersed
Bhi01g01815 Bhi-Chr1:38832607 Bhi11g02049 Bhi-Chr11:58415895 9.34E-30 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g01815 K09874 - csv:101215315 473.396