Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g01898 AATTTGCAACTCCACTTCTATTTTCCTTTTGGTTCTCCTTCCCCGTGAAACCCTAGCCCCCCAGTATCTCCTTCGCGAGCCCTAGCCTTCCCGTTCTCCATTTTCTGCGCAATGGTTCAGCCGACAAATACATCCAAATTGCGATGGGGGGAGCTAGAAGACGACGACGGGGACCTAGATTTTCTTCTTCCGCCAAAGCAAATTATCGGGCCAGATGAAAATGGGTTGAAGAAAATTGTTGAGTATCAGTTTAACGAAGATGGTAACAAGGTCAAAATCACAACCACCACTCGTACACGCAAGCTCGCCCATGCTCGCCTTAGTAAACATGCCGTGGAGCGCCGATCTTGGGCCAAGTTCGGCGATGCTGTTCATGAAGATGTCGGCAGTCGGCTCACTATGGTCTCCACTGAGGAGATTCTTCTCGAGCGCCCTCGTGCTCCTGGTAGCAAACCAGAGGAGCCCAAGGTTGCTGGAGACCCGCTAGCTCAACTTGGTAAAGGTGGAGCTGTTCTTATGGTCTGTCGAACTTGTGGTAAAAAGGGTGACCACTGGACCTCAAGGTGCCCTTACAAAGACCTGGCACCACAAGCTGATGGATTGGATAAGCCTGTTGCACCAGAGGCTACAACTGCTGCTCCTGGTGCAACAAAGGGAGCGTATGTTCCCCCAGGTATGAGAGCAGGTGCGGAGAGGACTGGAACTGACATGCGGCGTAGGAATGATGAAAACTCTGTTCGTGTTACCAACCTTTCAGAGGACACTAGAGAGCCTGACTTGCTTGAGCTCTTCCGATCTTTTGGTGCTGTTAGCCGAGTTTATGTTGCTGTTGATCAAAAGACTGGCATGAGCAGAGGATTTGGTTTTGTGAACTTTGTTAATCGTGAGGATGCACAAAGATCAATTAACAAGCTTAATGGATATGGTTACGATAATCTCATCCTTAGAGTTGAGTGGGCCACTCCAAGGGCGACTTAAAGGTAGGATCTTTCTCTCAAAACGTCTCCTGATTTGCTTACTCCCGCTGTTGGAGTTTTCTCTCCCACATTTTGTTAATGCCTTTTTGAGATTCCAAGTCCTTAAAACAATTAATGATATCTATTTCTACTTGATAATTAAATTTTACATGTAGTAGAATTAATTCAATGTCTTTGAGTTTTCGTATTTCATCAGTTAAAGATGGGATGAATGATGATGTTTTTTCACATTTTCTTAGCGTGGCAATAGTGCTGAAATGACAATATGTTGTAAAGGAAAATCCATTGCTGTTTATGAAGCTGTATACGCTATTGGACGA 1297 45.49 MVQPTNTSKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTTRTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPEATTAAPGATKGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRSFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 288
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 41540004 41541872 - XM_039020883.1 Bhi01g01898 24671
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g01898 288 PIRSF Transl_init_eIF-3_RNA-bind 1 288 IPR017334 GO:0003743|GO:0005737|GO:0005852
Bhi01g01898 288 SUPERFAMILY RNA-binding domain, RBD 205 286 IPR035979 GO:0003676
Bhi01g01898 288 SMART rrm1_1 208 281 IPR000504 GO:0003723
Bhi01g01898 288 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 9 287 IPR017334 GO:0003743|GO:0005737|GO:0005852
Bhi01g01898 288 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 209 275 IPR000504 GO:0003723
Bhi01g01898 288 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 7 287 - -
Bhi01g01898 288 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 207 285 IPR000504 GO:0003723
Bhi01g01898 288 CDD RRM_eIF3G_like 208 283 IPR034240 -
Bhi01g01898 288 Gene3D - 179 288 IPR012677 -
Bhi01g01898 288 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 7 287 - -
Bhi01g01898 288 Pfam Eukaryotic translation initiation factor 3 subunit G 31 157 IPR024675 -
Bhi01g01898 288 CDD eIF3G 37 156 IPR024675 -
Bhi01g01898 288 MobiDBLite consensus disorder prediction 172 195 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01898 Bhi-Chr1:41540004 Bhi08g01986 Bhi-Chr8:57334467 0 dispersed
Bhi01g01898 Bhi-Chr1:41540004 Bhi09g00296 Bhi-Chr9:6342711 1.82E-11 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g01898 K03248 - csv:101207022 545.428