Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g01915 CCCTTAAATATCCCTTTGTACTTCCTCTCTTTATATCCTCAATCAAATACCCTTTTTCCCCCAAATTTCTCTCTCATTTTATGCTTCCATTCTGCCATTGCTGTTCTTGCTCAAAATGCGGATGAGTTGTAATGGTTGCAGAGTACTTCGCAAAGGTTGCAGTGAGAATTGCAGTATTCGACCTTGTTTACAGTGGATCAAGACTCCTGAATCTCAGGCTAACGCTACCGTTTTTCTCGCTAAGTTCTATGGCCGTGCTGGACTCATGAATCTCATCAACGCTGGTCCTGATCATCTCCGCCCTGCGATTTTTAGATCTCTTCTCTACGAGGCTTGTGGACGGATTGTCAATCCGATTTACGGATCGGTTGGATTATTGTGGTCTGGTAGTTGGCAGCTCTGTCAGGCGGCTGTTGAAGCCGTACTTAAAGGTGCTCCGATCACGCCGATCAACTCCGAAACGGCAGCTACTGCCGACGGACCGCCGTTGAAGGCTTACGACATTCGTCACGTTTCCAAGGATGAAAACTCCGTTGCGTCCAACGATACCGAAGCCAATCGGCGAGTTAAGACTCGGTGCCGGTTCAAGCGGTCGGCTGTGAAAGGGAAAGCGAGTAAAGGAATTGCCTCCACTGTTGATGAATCGACTCGGCGACTCTGCTCTACCGAGTTGAATAGGTCGTCGAGTGGTGAGTCGTCGTTGAGTCACCAATCCGACTCGCGGCATCTCGAGAACGAGAGTAAAGAAACCGAGAGCATTATTTCAGTTGGAACAGCGGAGGATTCTCCTCCTCCGGTGCCGTCGGTTTTTTCCCGATCGGAATCCACGGGCCACGACGGCGGCGCAGTGCCAATTCCGCAAAGTGAATTAGCTCTAGAACTAACCCTGGGGATGGAGCCGGTGTTACGTGCACAGCACGTGATTCCAATGAAGAAGCGAAAGATAGAGGCCGACGTCGGGTTCAGGCCCAATAACGAGACGTGCAATACTGTTTTAGGCCTTGATTTTTCAGCCTGAAATAGAGGCCCAATAATGAGCCCACGCACACAACGACGGCAATAATAATAGTAATAATAAAAATAATAAGATAAAAAAGTAAGAATAAAAGAGAGTACAATTTTGACGGCGGGGATTGGCTATCTTCGGTGGCATAGAAGAGATCCGGACCATTCGTTTAGTTCGTTCCTTTGTTTTGACGTTTAGTTTTTATTGTAATTTACTGTTTTAACCCTGTCCCCTTTTGTAACTTGAAGCGATGTGTATATATTAAAAAAAAAAAAGTGGTCGCAATGTGTATAGGAAAGGAATATAATGTAAAAATGCAACAGGAGGCGAAAAGGTTCTTAGGTTTTTTTAAATCTCCATTTTCTTTATAAATTTTCTTAAAATATTTTAAGTTTGGTATCAAACAAGGGGCATGGCATGTTCCCTTCAGTTCA 1440 45.28 MRMSCNGCRVLRKGCSENCSIRPCLQWIKTPESQANATVFLAKFYGRAGLMNLINAGPDHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSETAATADGPPLKAYDIRHVSKDENSVASNDTEANRRVKTRCRFKRSAVKGKASKGIASTVDESTRRLCSTELNRSSSGESSLSHQSDSRHLENESKETESIISVGTAEDSPPPVPSVFSRSESTGHDGGAVPIPQSELALELTLGMEPVLRAQHVIPMKKRKIEADVGFRPNNETCNTVLGLDFSA 300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 42161248 42162776 - XM_039043316.1 Bhi01g01915 24688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g01915 300 MobiDBLite consensus disorder prediction 184 198 - -
Bhi01g01915 300 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Bhi01g01915 300 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Bhi01g01915 300 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 296 - -
Bhi01g01915 300 PIRSF AS2 1 296 IPR017414 -
Bhi01g01915 300 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 296 - -
Bhi01g01915 300 MobiDBLite consensus disorder prediction 184 244 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01915 Bhi-Chr1:42161248 Bhi07g01321 Bhi-Chr7:40406262 2.08E-65 dispersed
Bhi01g01915 Bhi-Chr1:42161248 Bhi01g03484 Bhi-Chr1:88094124 2.67E-93 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
177 PF03195 LOB 1.80E-24 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g01915 - - csv:101208245 523.472