Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g01936 AAAGAGGGACACAAATTATAATTGAACCGTGGGAAAAAGTACAAATTTGCAAAAGCAAGTCCGAAAGTTTGCATTATTTAATTTCGCTTCCCCCACTCCCGAAAAAAGAGAGAAAAGAAAGGTATTACTATTATTATTATAGCCTTGCAGTGGTTCCTTATCTCTTCCGCTCGTGGCCTCCCTCTGTCCATCACTTTCATTGAAGCTGCCGCCTCTCTCTTCCCCCGTTCCCATCTCTTCCAACTTACACATTCAAAAATGTATCCATAGTTTCAAAATCAATCCACCATTAAACTCCAGTTTCACCACTATGATCCATCTCCACACTCAAAAAACCTCTGAAATTCTATACCCATGAAGCGAGACCACACTCACCAATCCTCAAATCCCGCCGCCGCAGCCTCCGGCAACCCCAAGACATGGCCGGTCAAGGAGGAGGAAGACGACGACAAAGATCTAGCTGCTCTTGGCTACAATGTCCGGTCGTCGGACATGGCCGACGTTGCTCTGAAACTGGAACAGCTAGAAATGGTAATGGGTTTGTCGGAAGAAGATGGAATTTCTCACCTCTCTTCCAATACAGTCCATTACAATCCTTCTGATGTTTCTTCTTGGGTTCAAAGCATGCTCGCTGAACTCAATACTCCGCTTCAATCCCAAGGAATGATCCATGACCCTGTTCTCGCCATAGCTGAATCCAGTTCCTCCTCCGTCCTCGCCGCCTTCACCGACGATTCCGAGTACGATCTTAGGGCCATTCCGGGCTTTGCTGCTTTCCCACAACTCGATTCCACCAACCCCAGAAAGCGATTCAAGAAATCAGATTCCGAATCCCTTCCTGCATCTGCATCTTCTTCTTCTTCGTCGTCCTCGTCGGAGCCGTCGCGCTCGGTGGTTCTGGTGGATTCCGCCGAGACTGGCGTCCGTCTGGTCCATAGTCTTCTCGCCTGCGCCGATGCCGTCGACACAAACAATCTCAACCTTGCTGAGGCTCTACTAAAACACATCAGAATCCTCGTTGAAGCTCAGGCCGGCGCGATGAGAAAAGTCGCTGGCTATTTCGCTCAAGCTCTCACTCACCGGATTTACAGATTCTACCCACAGAAGCCCTTCAATTATTCATCTTCATACACCGATCTTCTCCTCATGCATTTCTATGAATCTTGCCCCTATCTGAAATTCGCCCATTTCACTGCCAATCAAGCTATTCTCGAATCCGTTGGTTCTGCTGGTACCGTCCACGTCATCGATTTCAACCTCCAGCAAGGCCACCAATGGCCGCCGTTGATTCAGGCCTTCGCACTCCGACCAGGTGGGCCTCCGGCGTTTCATCTTACTGGAATCCGTCCCCCACCGGAGGAAAATTCCTCTGACGGATTACATGAAGTGGGCTCGAAATTGGCGCAATTCGCGGATAAATTCGGCGTGAAATTCGAATTCCGTGGATTTTTCTGCAACAATTTGGCCGATCTCGAACCGTCAATGCTCAATTTAGAAACAGAAACCGTCGCTATAAACTCCATTTTCGAGCTCCACCGGCTACTGGCCAATCCGGGCGCAATTGAAAAAGTTCTAACAACAATCAAAGAACTGAACCCCAAAGTCGTCAGCGTCGTGGAGCAGGTCGCCGATCACAACGGGCCATCGTTCGTAGACCGATTCACAGAAGCACTACACTATTATTCAAGCTTATTCGATTCGTTAGAAGGGTCGCCGGCAGGGGAGGAGGATGTGCTGAGGTCAGAGGAATATTTAGGGAGGCAAATCTGCAACGTAGTGGCGTGTGAAGCTTCCGACCGGGTCGAGCGACATGAGACGGTGGCGCAGTGGCGGAACCGGTTGGGCTCAAGTGGGTTCGAGATGGTTCATCTGGGTTCGAACGCGTTCAAGCAGGCGAGTACTTTGCTGGCGGCTCTGTTCGGCGGTGGAAATGGGTACAGAGTCGAAGAGAATAATGGGAGTTTGACTTTGGGATGGCACACTCGGCCGCTCATCGCCACGTCGGCCTGGACGCTGGCCGGAGGCGGTCGGAATGCCTAGTCGGCTCGGCCGAGTTGAGGGCGGATCTGAACCCTTTGAAATATAGAGAGGGAAATAGAAGGAAAGTGGTGGTTTTGTGTAATTCTTCTTTGTTTAGTTGTTTTATTACTCTCTTCCTTTTTATTTTGTATTTTACTGTTTTGCCCCCCTTTTTATTTTTGAAAATATGGTAGAGAAGCTGAGGAAGAGAAGGGGTTTTTCTTTTA 2246 49.29 MKRDHTHQSSNPAAAASGNPKTWPVKEEEDDDKDLAALGYNVRSSDMADVALKLEQLEMVMGLSEEDGISHLSSNTVHYNPSDVSSWVQSMLAELNTPLQSQGMIHDPVLAIAESSSSSVLAAFTDDSEYDLRAIPGFAAFPQLDSTNPRKRFKKSDSESLPASASSSSSSSSSEPSRSVVLVDSAETGVRLVHSLLACADAVDTNNLNLAEALLKHIRILVEAQAGAMRKVAGYFAQALTHRIYRFYPQKPFNYSSSYTDLLLMHFYESCPYLKFAHFTANQAILESVGSAGTVHVIDFNLQQGHQWPPLIQAFALRPGGPPAFHLTGIRPPPEENSSDGLHEVGSKLAQFADKFGVKFEFRGFFCNNLADLEPSMLNLETETVAINSIFELHRLLANPGAIEKVLTTIKELNPKVVSVVEQVADHNGPSFVDRFTEALHYYSSLFDSLEGSPAGEEDVLRSEEYLGRQICNVVACEASDRVERHETVAQWRNRLGSSGFEMVHLGSNAFKQASTLLAALFGGGNGYRVEENNGSLTLGWHTRPLIATSAWTLAGGGRNA 561
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 43009690 43011935 - XM_039047022.1 Bhi01g01936 24709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g01936 561 Gene3D - 31 95 IPR038088 -
Bhi01g01936 561 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 28 552 IPR005202 -
Bhi01g01936 561 MobiDBLite consensus disorder prediction 159 178 - -
Bhi01g01936 561 MobiDBLite consensus disorder prediction 149 178 - -
Bhi01g01936 561 MobiDBLite consensus disorder prediction 1 31 - -
Bhi01g01936 561 Pfam GRAS domain family 192 553 IPR005202 -
Bhi01g01936 561 Pfam Transcriptional regulator DELLA protein N terminal 32 98 IPR021914 -
Bhi01g01936 561 SMART DELLA_2 33 105 - -
Bhi01g01936 561 PANTHER DELLA PROTEIN RGL1 28 552 IPR030006 GO:0003712|GO:0005634
Bhi01g01936 561 ProSiteProfiles GRAS family profile. 183 553 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01936 Bhi-Chr1:43009690 Bhi12g01253 Bhi-Chr12:37250717 0 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
183 PF03514 GRAS 2.00E-122 CL0063 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g01936 K14494 - csv:101203095 966.837