Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g01962 ACAAATTTTCTATCTCTCTCTCTCTCTCTCCTCTTTCCAGTGATATATAAATCGACTCCATTGATTCATTCCTTCATCAGCTTAACCAACAGTAACAGGGAAGAAGAACAAGAAGTAGAACAGGATTTGTACTTCCAACATTCGTTTTTCTTCTGGGTTTTCGTTTGATTTCTATTGCGGAATCTGCAATGATCTTTTCATGGAGGAAAAACAAATTGGGGTTTCTTACCAAGTTGAAAAAAGAGCTTCCAGGGGTCGATTCAGGTTCGGAAATCGCGATTCCTTCTCATTATATGTGTCCGATTTCGCTTGATTTGATGAAGGATCCTGTGATTTTGTCCACTGGGATTACTTATGATAGAGAGAGTATTGAGAAATGGATTGATGGGGGAAATTTTTCATGTCCTGTGACGAAACAGGATTTGATTAGTTTCGACCTAATCCCTAATCATTCTTTGAGGAGGTTGATCCAAGGTTGGTGTGTTGCGAATCGTTCATATGGGATCGAGCGGATTCCGACGCCGCGGATTCCGGTCTCCCCGTATGAAGTTAAGGAGATTTGTTCGAGAATCTCGATCGCGACTCAAAGAAGCGATTCGAAGAAATGCAGTGAATTGATGGGTAAGATCAGGAATTGGGCGAAAGAGAGCGAGAGGAACCGGAGGTGTATTGTGAATGGAGGAACTGGGGATGTTTTAGCAGCTTCGTTTGAGCATTTTGCTGGTGTTTCGATTGAAAAACATGTGGGTTTGTTGGAGGAGATTTTATTGGTTTTGGCTTGTGTGTTCCCAGTCGCCGTTGAAGGCTTATCTAAGCTCGGATCTGCTGATTCTTTGAAATGCTTGGTTTCCTTCTTAATCGGTAAAGATCTTTCTCCCAAACAGAACGCAGTTTTTGTTCTGAAAGAACTCTTGTCAGCTGATAGAAGATATGTTAATTCATTGGCTGCCATTGAAGGAGTATCTGAAGCTTTAGTTAGCATTATCAAGGAGCCTCTTTGCCCCTCTGCTACAAAATCATCCCTTACTGTCATTTTCTACATGATTTTACCATCAGATATTGGCGAGAAAATGGCATTGAAATTTGTGGAACTAGGCTTGGTCTCTCAGCTACTAGAATTTCTGGTAGATGCAGAGAAAAGCCTGTGTGAGAAAGCTTTGGGAATTTTGGATGGAGTTTGTGATTACAAACAAGGAAGAGAGAAGCTTTACAAGAATGCACTAACCATTCCACTCTTAGTCAAGAAGATCCTAAGAGTTTCAGAGTTAGCCACTGAATATTCTCTGTCAATATTGTTGAAGCTCTGCAAGAGTGGAGAGAAGGGTGAGGATGAAGTGAGAGTTGAAGCTGTCCAACTGGGTGCTTTCCAGAAGATATTGGTTCTCTTACAGGTTGGTTGTGGTGGTGACATGAAGGACAAGGTCACTGAGATGTTGAAATTATTGAATCTCTACAAAGATAGGCTAGATTGTATTGATTCATCCATGCATTTTAAGTACTTGAAGAAATCATTTTGATTACTGAAAGAGAAAAGACAGATTTTTCTTTTGTTATTGTTTAGATAGTGAAAAAATGTATATAGATACACAAACACACAGTTAAATTAATGATTACTGAGAAAAGAGATTTATACTTA 1636 39.61 MIFSWRKNKLGFLTKLKKELPGVDSGSEIAIPSHYMCPISLDLMKDPVILSTGITYDRESIEKWIDGGNFSCPVTKQDLISFDLIPNHSLRRLIQGWCVANRSYGIERIPTPRIPVSPYEVKEICSRISIATQRSDSKKCSELMGKIRNWAKESERNRRCIVNGGTGDVLAASFEHFAGVSIEKHVGLLEEILLVLACVFPVAVEGLSKLGSADSLKCLVSFLIGKDLSPKQNAVFVLKELLSADRRYVNSLAAIEGVSEALVSIIKEPLCPSATKSSLTVIFYMILPSDIGEKMALKFVELGLVSQLLEFLVDAEKSLCEKALGILDGVCDYKQGREKLYKNALTIPLLVKKILRVSELATEYSLSILLKLCKSGEKGEDEVRVEAVQLGAFQKILVLLQVGCGGDMKDKVTEMLKLLNLYKDRLDCIDSSMHFKYLKKSF 442
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 43851638 43853273 - XM_039043470.1 Bhi01g01962 24735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g01962 442 PANTHER WDSAM1 PROTEIN 25 442 IPR045185 GO:0061630
Bhi01g01962 442 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 21 25 442 - -
Bhi01g01962 442 Gene3D - 121 417 IPR011989 -
Bhi01g01962 442 Pfam U-box domain 31 102 IPR003613 GO:0004842|GO:0016567
Bhi01g01962 442 ProSiteProfiles U-box domain profile. 30 104 IPR003613 GO:0004842|GO:0016567
Bhi01g01962 442 CDD RING-Ubox_PUB 37 77 IPR045210 -
Bhi01g01962 442 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 15 108 IPR013083 -
Bhi01g01962 442 SUPERFAMILY RING/U-box 25 107 - -
Bhi01g01962 442 SUPERFAMILY ARM repeat 208 419 IPR016024 -
Bhi01g01962 442 SMART Ubox_2 34 97 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01962 Bhi-Chr1:43851638 Bhi07g00411 Bhi-Chr7:18495586 1.25E-156 dispersed
Bhi09g03206 Bhi-Chr9:82258321 Bhi01g01962 Bhi-Chr1:43851638 4.49E-33 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g01962 - - csv:101220059 842.802