Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi01g01975 | ATAAAAAATTCACATTGGAATTGTCAATTGTCATTGAGGGTGAAGAAGGATATCCAAAGAAGGAAAGGGAAATCCATAACCCACAGAAAAAGAAGAAAACAGAGTTTAAAAGCTTCTTCTTGGAGAATCTCTCTGATTTGGAGAAAAATTAAAAGGGGGAGTTTGAAAATGGAGAATTTAATGGGTTTGCTCAGAGTCCATGTGTTTAGAGGTGTTAATCTTGCTGTAAGAGATGTTGTTAGCAGTGATCCTTATGTTATTTTCAAGATGGGCAAACAGAAATTGAAGACTCGAGTAGTGAAGCAAAATATCAACCCAGAGTGGAATGAAGATCTAACTCTATCAATCCAAGATCCAAATCTTCCGGTCAACGTGTTGGTATATGACAAGGACTTGTTCTCGCTCGACGACAAGATGGGGGATGCGGAGTTCGACGTTCGACCTTTCGTGGAAGCAGTCAAGATGAGATTGAACAATCTCCCAAATGGAACCATCATAAGAAAGATTCAACCAAGTAGGGAAAATTGTTTGTCTGAAGAAAGTTGTATAGTTTGGGCAGATGGAAAAGTTATTCAGAAAATGTTTCTAAGGCTAAGAAATGTTGAGTCTGGTGAAATTGAGCTACAGTTGCAATGGATTGATATTCCTGGCTCTAGGGGACTGTAGATATAAAAAAATTAAAAATAATTAAATAATAATATATTTTATGAAATGGGATTTCTTTTTGGACTTTTA | 735 | 36.19 | MENLMGLLRVHVFRGVNLAVRDVVSSDPYVIFKMGKQKLKTRVVKQNINPEWNEDLTLSIQDPNLPVNVLVYDKDLFSLDDKMGDAEFDVRPFVEAVKMRLNNLPNGTIIRKIQPSRENCLSEESCIVWADGKVIQKMFLRLRNVESGEIELQLQWIDIPGSRGL | 165 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 44212987 | 44214753 | + | XM_039022219.1 | Bhi01g01975 | 24748 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi01g01975 | 165 | Pfam | C2 domain | 6 | 92 | IPR000008 | - | |
| Bhi01g01975 | 165 | SMART | C2_3c | 7 | 102 | IPR000008 | - | |
| Bhi01g01975 | 165 | ProSiteProfiles | C2 domain profile. | 1 | 103 | IPR000008 | - | |
| Bhi01g01975 | 165 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 1 | 164 | IPR044562 | - | |
| Bhi01g01975 | 165 | Gene3D | C2 domain | 4 | 160 | IPR035892 | - | |
| Bhi01g01975 | 165 | CDD | C2_ArfGAP | 6 | 148 | - | - | |
| Bhi01g01975 | 165 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 1-LIKE | 1 | 164 | - | - | |
| Bhi01g01975 | 165 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 2 | 91 | IPR035892 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi01g01975 | Bhi-Chr1:44212987 | Bhi02g00145 | Bhi-Chr2:2693294 | 7.92E-86 | dispersed | |
| Bhi08g00703 | Bhi-Chr8:23729838 | Bhi01g01975 | Bhi-Chr1:44212987 | 9.33E-42 | dispersed | |
| Bhi12g01088 | Bhi-Chr12:33042113 | Bhi01g01975 | Bhi-Chr1:44212987 | 2.65E-40 | dispersed | |
| Bhi12g01089 | Bhi-Chr12:33042113 | Bhi01g01975 | Bhi-Chr1:44212987 | 2.65E-40 | dispersed | |
| Bhi01g01975 | Bhi-Chr1:44212987 | Bhi08g01295 | Bhi-Chr8:39537215 | 3.39E-84 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi01g01975 | - | - | csv:101218477 | 320.857 |