Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g02001 TTTCAATGAAAAAAATTGTCGTGAAGATGAGAATTGATAGAAGGGAGAGAGAGAGAGAAGAGGAGCGATTGGCGGTCTTCTCTTTTTGCTCTGAATTTCTGATACGTAACGTTCAACTTTGGAATATATTTCTATTCATTTCTTCTCTCTCTATCTCTCTCTCTTTTAAAAAGCTTTTTCACTTTTTTCTCTCTTTAACCGTCTTCTTCCTTCTTCTCTTCTCTGCAACTCTCTTCCCCAACCAAATGCTTCCTAAATCCACCGGAATCCTCTGGCTCGACGGCGACCATGACGACGCCACTTCTTGGACCACAACTAACCACCACAACGACGACCCTATCGCCATTGCCGCCGCTTCCATTTCCTCCTTCAAATCCATGCTCGAATCCGACTGGTACATCAACTCTACTACTACTACTCCTCTCAATCCTTCTCACCAAGACTTCCATTCCCTTTCTTCTCACCCGGACATTCCACACCTTCCTTTCTCTTCCAATCCTTCCGATAACTTCCTCTTACACCCTATAGATTCCTCCTCTTCCTGCTCTCCTTCTCACGCTTTTCCTCTCGATCCTGCTCATTCCCACTCCATCTTGCCTTCTCATAAATCTTCCTGCTTCTCTTCTCTCCTTAACGTCGTTTGTGGCAGTAATTTTGATAATGCCTTCGATTTAGGAGGTGAGAGTGGTCTGCTTGGACCTTACCAAGGGAACCAAGCTTCCAATTCCTCCGTTTTGATGGGATTCACTGGCATTTCGTCTCTTCCTCAAATCGGTAATCAGGAACTCAGCTTAAACAACTCGGAACTCAGCTTAAACAACTCGGATTTTCCGGCCACTCGGTTGCTTCCGGTTGTCGATAACCCTCTCGCATTCGGCGCTGGATTTAATCCGGCGGCTGCTTTTGAAAGCTTCGATGACTCCGGGAATGCTCTGTTTCAGAACAGGTCTAAGGTTTTGAAACCTCTCGAAGTGTTCCCGCAAGTCGGTGCGCAGCCGACGCTGTACCAGAAGCGGGCGGCGCATCGAGTTGGCTCTGCCGGACCTGATAAACTAGAGAATTTGGAGGTTTCGGGTTTTAAATTAGGAGAAGGCTCAATGTGGACGCCCAATTTGGAGAGGCTGAGGAAGATGACGGGCGACGAGGACATTGAGGACGGCAGCGTGGATGTTTCTCGCTTGAATTACGATTCCGACGAGCCCAATGAGCATAATAAGCAAGAAGACAATGTTAATGCTAAAAACTGCGGAAGCAATTCCAATGCCAACAGTACTATAACTGGCGGAGACCAGAAGGGGAAGAAGAAGGGGCTGCCGGCGAAAAATCTCATGGCGGAGCGGCGGCGGAGAAAGAAACTGAATGATAGACTTTACATGCTTAGGTCCGTCGTACCCAAGATAAGCAAGATGGATAGAGCTTCAATACTTGGAGATGCCATTGACTACTTGAAGGAGCTTCTTCAAAGGATAAATGATCTCCATAATGAACTTGAGTCGACTCCTCCTGGTTCTTTGTTGCAGCCTTCTGCAAGTTTTCACCCTTTGACGCCGACGCTGCCGACTCTTCCCTGTCGTGTCAAAGAGGAGCTGTGTCCAAGCTCCTTGTCCAGCCCCAATACCACCCAGCCTGCCAGGGTTGAAGTTCGGGTCAGAGAAGGCAGAGCTGTCAATATTCACATGTTTTGTTCTCGCAAGCCGGGTCTTTTGCTATCCACCATGAGGGCTTTGGATAACCTCGGCTTGGACATCCAACAAGCTGTAATCAGCTGTTTCAATGGATTTGCTTTAGATATCTTTAGCGCTGAGCAATCTAAGGAAGGTCAAGAGATCTTACCTGAGCAAATAAAAGCAGTGCTGTTGGATTCAGCTGGTTTACATGGTGTTATATAACTGAAGCTATCATCAAATGAAGCAGCTAGCCCTTCCATTGATGGATGGAATAACTGATGTGTTTTATGCATCAACAAATTCTGTAAATCCAACAACATTCAGCTCAGCCTCGTCTTATTCTTGCACACACCATAGACGAGTAGGTCTGGCTAATATTTTCTGGTTTTAGTATTTTACCTATCTTGCTTTCAGAACATATTGCAAGATCAACCTCAAGTGTTAACATTTCGTTTGGTCCAGTTTTTTTGGAATAAGATTTTCTTCTTAAATGTAGTTTCCTTCTGTTAATATTTCTTCATCATTGGAGCAATA 2201 45.48 MKKIVVKMRIDRREREREEERLAVFSFCSEFLIRNVQLWNIFLFISSLSISLSFKKLFHFFLSLTVFFLLLFSATLFPNQMLPKSTGILWLDGDHDDATSWTTTNHHNDDPIAIAAASISSFKSMLESDWYINSTTTTPLNPSHQDFHSLSSHPDIPHLPFSSNPSDNFLLHPIDSSSSCSPSHAFPLDPAHSHSILPSHKSSCFSSLLNVVCGSNFDNAFDLGGESGLLGPYQGNQASNSSVLMGFTGISSLPQIGNQELSLNNSELSLNNSDFPATRLLPVVDNPLAFGAGFNPAAAFESFDDSGNALFQNRSKVLKPLEVFPQVGAQPTLYQKRAAHRVGSAGPDKLENLEVSGFKLGEGSMWTPNLERLRKMTGDEDIEDGSVDVSRLNYDSDEPNEHNKQEDNVNAKNCGSNSNANSTITGGDQKGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPGSLLQPSASFHPLTPTLPTLPCRVKEELCPSSLSSPNTTQPARVEVRVREGRAVNIHMFCSRKPGLLLSTMRALDNLGLDIQQAVISCFNGFALDIFSAEQSKEGQEILPEQIKAVLLDSAGLHGVI 627
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 45327898 45331487 - XM_039037990.1 Bhi01g02001 24774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g02001 627 CDD ACT_UUR-ACR-like 556 616 - -
Bhi01g02001 627 Gene3D - 429 498 IPR036638 GO:0046983
Bhi01g02001 627 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 184 626 - -
Bhi01g02001 627 SMART finulus 441 490 IPR011598 GO:0046983
Bhi01g02001 627 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 435 484 IPR011598 GO:0046983
Bhi01g02001 627 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 438 503 IPR036638 GO:0046983
Bhi01g02001 627 PANTHER BHLH TRANSCRIPTIONAL FACTOR 184 626 - -
Bhi01g02001 627 MobiDBLite consensus disorder prediction 378 437 - -
Bhi01g02001 627 MobiDBLite consensus disorder prediction 409 428 - -
Bhi01g02001 627 Coils Coil 478 498 - -
Bhi01g02001 627 Pfam Helix-loop-helix DNA-binding domain 442 484 IPR011598 GO:0046983
Bhi01g02001 627 CDD bHLH_AtAMS_like 438 502 - -
Bhi01g02001 627 ProSiteProfiles ACT domain profile. 555 627 IPR002912 -
Bhi01g02001 627 MobiDBLite consensus disorder prediction 378 408 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02001 Bhi-Chr1:45327898 Bhi08g01538 Bhi-Chr8:44167390 5.48E-163 dispersed
Bhi01g02001 Bhi-Chr1:45327898 Bhi04g00903 Bhi-Chr4:22898922 9.49E-38 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
192 PF00010 HLH 2.70E-09 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g02001 - - bhj:120082707 1144.41