Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g02098 CAATTTCTCCAAATTTCTCCCCTCTCTTCATTTTCCCCTCCAAAGTTTCACTTTTCTCCAAAATCCCCACAACCCCAATTAAAATCAGATTAGATTACACAAATTCCTGTTTTCTGATCGTCCGGAGGCAAAGTTCCTCATCATTAAATTTTTTATCTTTTAATCTTTTTTCTCTCTCTTGATGGAGAATTATCAGATGTTTTTCCCCTGCTCCGGCGGCGGCGATGGTGGCGGAGGACTGTCGGCATATCATCACGCCGACATGTCGTCCAGCGGTGGGTCTGATATGTTCGGGAATTTTCACGGCGGCGATATGGAGGTAAGTGGATTTTTGGGGATGAAGACAGAGGTGGATGCGGCGGCGGCGGTGGAAGTAGACGGCGGCGGAAGAAAGAAAGGGGAGAAGAAGGTGAGGAAACCGAGATATGCCTTTCAAACAAGAAGCCAAGTTGACATTCTGGACGATGGATATCGTTGGAGAAAATATGGTCAAAAAGCTGTAAAAAACAACAAGTTTCCTAGGAGCTATTATAGATGCACATATCAAGGGTGCAATGTGAAGAAGCAAGTGCAAAGGCTAACAAGAGATGAAGGGGTGGTGGTGACAACATATGAAGGAATGCACACACACTCCATTGATAAGCCAACCGACAACTTTGAACAAATCTTGAGTAGAATGCAGATTTATAGTACTCCTTTTTGAGAACATAATCTTCAATTTTATGAAGAAGAATTGAAGGAGATCTCAAGATATCAATATCAAACACAAGCCAAACACAATCAAATCACACATATTAATACTTGTGCATGTGTAATTTGAAAAAAAGGCTGATCATGTTTTCTTTTTTGTACTTCCTTCATCAGCTTCTGTGTTTTTTCTTTTCCTTGTAGAAATTAATAAAAAGTTTGCACAAGCAGATGAAATTAATATATCCATCTTTGTGTTAGAATAATTAATTTA 961 39.65 MENYQMFFPCSGGGDGGGGLSAYHHADMSSSGGSDMFGNFHGGDMEVSGFLGMKTEVDAAAAVEVDGGGRKKGEKKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTYQGCNVKKQVQRLTRDEGVVVTTYEGMHTHSIDKPTDNFEQILSRMQIYSTPF 173
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 48238873 48242006 - XM_039022798.1 Bhi01g02098 24871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g02098 173 Gene3D WRKY domain 78 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi01g02098 173 ProSiteProfiles WRKY domain profile. 88 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi01g02098 173 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 45 168 IPR044810 GO:0003700
Bhi01g02098 173 Pfam WRKY DNA -binding domain 94 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi01g02098 173 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 45 168 - -
Bhi01g02098 173 SMART WRKY_cls 93 152 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi01g02098 173 SUPERFAMILY WRKY DNA-binding domain 85 152 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02098 Bhi-Chr1:48238873 Bhi01g02751 Bhi-Chr1:68177920 4.36E-59 dispersed
Bhi11g01271 Bhi-Chr11:37588715 Bhi01g02098 Bhi-Chr1:48238873 6.24E-31 dispersed
Bhi01g02098 Bhi-Chr1:48238873 Bhi05g02037 Bhi-Chr5:62389375 3.31E-34 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
197 PF03106 WRKY 5.50E-26 CL0274 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g02098 - - csv:101219349 280.796