Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g02134 ATGGCCTCTAGGCTCATTGATACTATTGCTAATCAAAAGATTGACACCACATGGTACGATGCTCGTGCCACCTTCTATGGCGACATGAGGGGTGGTGAAACTATGCAGGGAGCTTGCGGGTATGGAAATCTATTCAAACAAGGTTATGGGCTAGCAACAGCGGCGTTAAGTACAGCATTATTCAATAATGGTGGAGCCTGCGGAGCATGCTTTGAGATAATGTGCGTGAACAATGAACACAATTGGTGTATACCAAATGCAGGCACAATCAAAATAACTGCCACAAATTTCTGTCCTCCAAACTATACAAAAACACAAGATATTTGGTGCAATCCACCCCAACGCCATTTTGATTTATCACTTTATATGTTCACCAAAATGGCCCCTTACAGGGCTGGAGTCATCCCGGTTCGCTACCGTAGGACGCTTTGCTACAAACAAGGTGGTCTACGGTTTGAACTCAAAGGGAATCCTTATTGGCTTCTTGTATTGCTCTACAATGTTGGTGGTGCAGGTGATGTTGTGGATGTTAAGATTAAAGGCTCGTCTACTGGATGGTTACAAATGTCAAGGAATTGGGGCCAGAATTGGCAAGTTGGTACCTTTTTGGTGGGGCAAAGTTTGTCCTTTAGAGTCACTACTAGTGATTGGAAGACCATTGAATTTGATAATGTTGTGCCGAGCTCTTGGCAGTTTGGACAAAACTTTGAAGGAAAATATAATTTCTAA 729 42.94 MASRLIDTIANQKIDTTWYDARATFYGDMRGGETMQGACGYGNLFKQGYGLATAALSTALFNNGGACGACFEIMCVNNEHNWCIPNAGTIKITATNFCPPNYTKTQDIWCNPPQRHFDLSLYMFTKMAPYRAGVIPVRYRRTLCYKQGGLRFELKGNPYWLLVLLYNVGGAGDVVDVKIKGSSTGWLQMSRNWGQNWQVGTFLVGQSLSFRVTTSDWKTIEFDNVVPSSWQFGQNFEGKYNF 242
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 49923685 49924540 + XM_039031673.1 Bhi01g02134 24907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g02134 242 SMART dpbb_1 53 139 IPR007112 -
Bhi01g02134 242 PRINTS Expansin signature 48 62 IPR002963 GO:0009664
Bhi01g02134 242 PRINTS Expansin signature 76 87 IPR002963 GO:0009664
Bhi01g02134 242 PRINTS Expansin signature 90 100 IPR002963 GO:0009664
Bhi01g02134 242 PRINTS Expansin signature 107 124 IPR002963 GO:0009664
Bhi01g02134 242 PRINTS Expansin signature 124 137 IPR002963 GO:0009664
Bhi01g02134 242 PRINTS Expansin signature 148 160 IPR002963 GO:0009664
Bhi01g02134 242 PRINTS Expansin signature 160 181 IPR002963 GO:0009664
Bhi01g02134 242 PRINTS Expansin signature 195 216 IPR002963 GO:0009664
Bhi01g02134 242 PRINTS Expansin signature 224 240 IPR002963 GO:0009664
Bhi01g02134 242 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 159 238 IPR007117 -
Bhi01g02134 242 Pfam Expansin C-terminal domain 151 227 IPR007117 -
Bhi01g02134 242 SUPERFAMILY PHL pollen allergen 146 237 IPR036749 -
Bhi01g02134 242 PRINTS Expansin/Lol pI family signature 17 32 IPR007118 GO:0005576
Bhi01g02134 242 PRINTS Expansin/Lol pI family signature 35 53 IPR007118 GO:0005576
Bhi01g02134 242 PRINTS Expansin/Lol pI family signature 57 75 IPR007118 GO:0005576
Bhi01g02134 242 PRINTS Expansin/Lol pI family signature 132 148 IPR007118 GO:0005576
Bhi01g02134 242 PRINTS Expansin/Lol pI family signature 186 200 IPR007118 GO:0005576
Bhi01g02134 242 PRINTS Expansin/Lol pI family signature 224 238 IPR007118 GO:0005576
Bhi01g02134 242 Gene3D - 149 242 IPR036749 -
Bhi01g02134 242 PANTHER EXPANSIN-A15 14 242 IPR002963 GO:0009664
Bhi01g02134 242 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 36 149 IPR007112 -
Bhi01g02134 242 SUPERFAMILY Barwin-like endoglucanases 17 167 IPR036908 -
Bhi01g02134 242 Pfam Lytic transglycolase 53 139 IPR009009 -
Bhi01g02134 242 Gene3D - 6 144 IPR036908 -
Bhi01g02134 242 PANTHER EXPANSIN-A21-RELATED 14 242 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02134 Bhi-Chr1:49923685 Bhi03g02000 Bhi-Chr3:42858229 1.24E-98 dispersed
Bhi01g02134 Bhi-Chr1:49923685 Bhi08g00598 Bhi-Chr8:19742027 6.26E-97 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g02134 - - bhj:120077708 522.316