Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g02308 ATGGATGGTGACATAATTAATAATCCACAAGATAATCATCATATGGGAACTTCTTCATTGATGAATAATTGTGAAATTGATTGGGATGGGCTTTTTTCTAGTTCTTGTTTGAATAATTTGGAGTTGGAGAAGGGAATTTGTGGAAGTGAGGATTATCCAATGGGAGATTATGATAATGTTGCTGTTGGAGGAATAAATTTAGAGGGTAATATTATTGGAGGGAAGAATAATAATAGTAATAATAAGTACAAAGGTGGGAAAATGGTGATGAGTAAAAGAAGAAATGTAATGGCTCCAAGGATTGCTTTTCAGACAAGGAGTGCTGAGGATGTTCTTGATGATGGCTATAGATGGAGGAAATATGGTCAGAAGGCAGTCAAACATAGTACCCATCCTAGGAGTTATTACCGGTGTACACATCATACATGTAACGTTAAGAAACAAATTCAAAGGCATTCCAAGGATCCAACCATAGTGGTGACAACATATGAAGGGATTCATAACCATCCATCTGAGAAATTAATGGAAACTCTAAGCCCTCTACTCAAGCAATTGCAGTTCCTTTCTGGCATTTAGAATCTAATAATTTTCCTTTTCAATTTCATCAACTTTTTTGTGTGTATGTATTTCTATGAATCATGCCACTCGAAATGCCTAATAGTGTTAAAGGTTGGGAAAGAAATCACATGATCACTTTCTTTTCTAATTAATGGC 714 35.15 MDGDIINNPQDNHHMGTSSLMNNCEIDWDGLFSSSCLNNLELEKGICGSEDYPMGDYDNVAVGGINLEGNIIGGKNNNSNNKYKGGKMVMSKRRNVMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI 191
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56472218 56474459 - XM_039032352.1 Bhi01g02308 25081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g02308 191 SMART WRKY_cls 112 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi01g02308 191 ProSiteProfiles WRKY domain profile. 107 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi01g02308 191 Gene3D WRKY domain 97 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi01g02308 191 PANTHER WRKY TRANSCRIPTION FACTOR 43-RELATED 17 187 - -
Bhi01g02308 191 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 17 187 IPR044810 GO:0003700
Bhi01g02308 191 SUPERFAMILY WRKY DNA-binding domain 105 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi01g02308 191 Pfam WRKY DNA -binding domain 113 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02308 Bhi-Chr1:56472218 Bhi01g02751 Bhi-Chr1:68177920 1.51E-38 dispersed
Bhi01g02308 Bhi-Chr1:56472218 Bhi09g00820 Bhi-Chr9:17929978 2.65E-32 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
221 PF03106 WRKY 1.10E-24 CL0274 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g02308 - - cmo:103493140 267.7