Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g02333 ATTATTTATTCAATACCTTACCATACCCCCTTCTCTCTATTATATCCCTTTCTGGGTTCCCTTAATTCTATACCCTCTAAGAAAAAAAACCCTCCCTTTCAAAAAAAGCTTCAATTTTTCCATCTGGGTTTTGTGCTTCATTCTTGTTTCTCTTCAAATTTTTTTGTTTTTCTTTTGTGGATCTTTACCTTTTTTTTCTTATATGTAATTTTACTATAGATATTTATATATATATACCCTAACTACTACTACTACTACTACTTTTCTACTTGGTGTGTTGTTTGAGATCCAATTTCTTCATAAAAATTAAATTACTTTCTTTCAAATTCATGGATGATTTTGGTTCATCTTCTAGATTTCATCATCATGAGTACTACAACTTTCAAAGCAGCAGCAGCAACAACAACAATAGAAGAAGAAGAAGCAGAGATTTTGATGATGAGGAACAACAACAACAACAAGATCAAGAAATGGAAGACTCTTGTAACAACAACAACAATAATAACAATTGTTCTGTTTTTGTAGAGAAAGAGCACATGTTTGACAAGGTTGTAACTCCAAGCGATGTGGGAAAATTAAACCGTTTAGTTATCCCAAAACAACATGCTGAAAAGTACTTCCCACTTGATTCTTCATCCAACGAAAAAGGTCTTCTTTTAAACTTTGAAGATCGCGGTGGTAAGCTATGGCGGTTCCGTTACTCTTACTGGACTAGCAGCCAAAGCTATGTGATGACCAAAGGCTGGAGCCGCTTTGTCAAAGACAAAAGACTCGATGCTGGTGATATTGTCTCTTTTCAAAGACCCCTTCATCATAATAAAGATCGTTTTTTTATCGATTGGCGACGCCGCCCGCCGCATCCGACGGTCGACACACCTTTATATTTCCACTGTGGCGGCGGCGGTAGCGGCAGCAGCGGAGGTGGTGGCCAATTTCCTCCTCATCATCACCATTTTCAGCTTCACGGCCAGTGGAATAATAATCCAGTGGCCACACCCTTATCTTTACATAGGGACCACGTCCTCCACTTGCCGCACAATAATAATAATGTGAGTTTATTTCATAATACTTATAATCATCATCATTATCATCATCATCATAATCGCCATCCCATTCTTGACGGTCCATATGATGGATCGTCGGTTTTTTACCATTTGAGATCCCCTACCGCACCACTGCAGATAGAGGCGGTACCAGTTATAGGGGATGGAAATGGTGGTGATGGTGATGGCAGTGGTGGTCGTCGTGAAATTGGGAAAACGGCTGCAGCTAAGACGACATTGAGGCTTTTTGGTGTTAATATGGAATGTGCCGTATCTGAAGATCAGTGTGGTGATGATGAATGTGACATAGCAACAACTTCCATGACGATAATGTCGCCGTCGTCATCTCAATTCCATGTTTATAATGGAATGCCAATGCCGATGCTGATGCCCATGTCGATGCAGATGCCAACAAACAATAACAACATATCAACAACCATGGAGTTTTTCGAGAAAGGGAAGTCGCCGATGTCGTCGTCTTTTGATTTTGGAACTTGACAAACTGAATCCACATCTCCAAAGAAAAAAAAAAACAAAGCTTCTTGGACAAATGCAGATGAAAATCAAACGGTGGTGATTGCTGTCTCTAATTCCTTGGAAAAATGGCAAAGCCCATGCAGGTTTTGACAGATAAAAGTGTTTCTGAGAGATGGCCTTTTAAAAGTTTTTGAAGATATATATATATATGACAGTGGAAGCAAATTACTTCATTTTCCTTCTGATTAGTTGCTTCATTTTGTTGACAATCACACTCACAAGAAGCCAGTTTGGTGGAGAATATTATAGGTTTTGAGAACTTTCCAAGGTGTGTATCTAGTTTTGACAATGTTAAATTTTCTAGTTTCTCTCTATTGTGTAAAACAATCTAACATGCTTTAGCAATATTTTTTTTAAAAAAATATTTACCACTACCTGATCTATTATTTCCA 1972 38.13 MDDFGSSSRFHHHEYYNFQSSSSNNNNRRRRSRDFDDEEQQQQQDQEMEDSCNNNNNNNNCSVFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRGGKLWRFRYSYWTSSQSYVMTKGWSRFVKDKRLDAGDIVSFQRPLHHNKDRFFIDWRRRPPHPTVDTPLYFHCGGGGSGSSGGGGQFPPHHHHFQLHGQWNNNPVATPLSLHRDHVLHLPHNNNNVSLFHNTYNHHHYHHHHNRHPILDGPYDGSSVFYHLRSPTAPLQIEAVPVIGDGNGGDGDGSGGRREIGKTAAAKTTLRLFGVNMECAVSEDQCGDDECDIATTSMTIMSPSSSQFHVYNGMPMPMLMPMSMQMPTNNNNISTTMEFFEKGKSPMSSSFDFGT 403
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57165864 57170891 - XM_039048778.1 Bhi01g02333 25106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g02333 403 CDD B3_DNA 69 158 IPR003340 GO:0003677
Bhi01g02333 403 SMART B3_2 71 175 IPR003340 GO:0003677
Bhi01g02333 403 Pfam B3 DNA binding domain 71 174 IPR003340 GO:0003677
Bhi01g02333 403 ProSiteProfiles B3 DNA-binding domain profile. 71 175 IPR003340 GO:0003677
Bhi01g02333 403 MobiDBLite consensus disorder prediction 15 56 - -
Bhi01g02333 403 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 24 368 - -
Bhi01g02333 403 SUPERFAMILY DNA-binding pseudobarrel domain 68 174 IPR015300 -
Bhi01g02333 403 Gene3D - 64 180 IPR015300 -
Bhi01g02333 403 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 24 368 IPR044800 GO:0003700
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02333 Bhi-Chr1:57165864 Bhi12g02268 Bhi-Chr12:72711789 7.33E-65 dispersed
Bhi01g02332 Bhi-Chr1:57165864 Bhi01g02333 Bhi-Chr1:57165864 0 tandem
Bhi01g02333 Bhi-Chr1:57165864 Bhi01g02334 Bhi-Chr1:57165864 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
225 PF02362 B3 2.20E-28 CL0405 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g02333 - - bhj:120090999 704.516