Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g02390 CCTTTCTCTCTTACAAAACTTGTGGCCATCGACTCCGCTCCCTTCTTTGAGTGCTAATTTGACAAAAAAATCCATACCCTTTTCTTTTTTTCATCCTCTTCATTGGCTACCATGTGCTGTTTTTCACATTTATTATTGTTTATGTTAACCCAATTGTCTTCTCGAATCTCCTTTTACCCTCTCAGGCCCCGCTAATCCTACCCCATTTCTCAATTTTCTCTGTTTCTATTTCTATTTCAATCCACACCCTCTTTTTTTTTTTTTCCTCCTTTCAATTCCTTTCTCTCTCTTTCTAGTCATTTCATTCCCCATCATCGTTTTCGTTGTCAAACGTCAAAAACCCATCTGTAATGGAGCTTTAAATTCGTCTAGGAAAGCCTCAGGAACTTGTCGTTGTTGTTGTTATTGGTTTGTGAATTTTGGGTGTTTGTGTTTTCGTCGAGGGGTTTTGGTTTATTTGGGGCAAATTCTTTTTTGGGCTTTGTTTTGTTTTTGGGGATATGAAGGCGTTGTTTTTGTTGTTGTTGATGTTGTGCGGTTGTTGATTTTGTTGGGGGGAGGAAATGAGAGTGGGGAGCTTCAATTATGAGAACACTTTGTGACGCTTGTGAAAGCGCTGCCGCTATCGTCTTTTGTGCTGCTGACGAGGCTGCTCTTTGCCGCTCTTGTGACGAGAAGGTCCATATGTGCAATAAACTCGCAAGTCGACATGTAAGAGTTGGCCTTGCAAGTCCCAGTGATGTTCCCCGTTGTGATATATGCGAGAATGCACCTGCTTTCTTTTACTGTGAGATAGATGGAAGTTCCCTTTGTTTGCAATGTGACATGATCGTTCATGTTGGAGGGAAAAGGACACATAAGAGATACCTTTTGCTACGGCAGAGGGTCGAGTTTCCAGGAGATAAACCTATAAATCTTGATGATCCGTCTCCACATTCCAAGGTTCCCAATGATATTGGTAAAGTACATAATCAGCCACCGCCGCATAAAGTGACAGCAGAAGACAATCAGCAAAATCATCACCGACTATCACCTGTTCGAGAGGCTAACGATGATGGTCATGCCGAGACCGATACAAACATGGTCGATTTGAATATGAAGCCTCAAAGGGTCCATGGTCAGGCTGCTAATAATCAGGATCTATGATCATGAACAACAAGGCATGGATTTCGATAACACATCGATGCCATCGCATTCATCAATCTTCCCCTTGCATCTGATTCAACAAAGCAGAACTTGTCACGGTTGCTCGTAGTGGAAACCTACATTGTTTGTTTCAGTCGAGGGGGGCCGTACACATGGGGTGTCGAGCTTGTTTAGTATTGTAGAGAAGTGGTTGGATAGATTTGAAAGCAAAAAAGATAAGATAAAAGCAGTGCATTTTAGTGAAATTGCAGATGCTGTACTATTACAACTTTAGAGACAGACCCAGCCAGCAGTTGGTTGGGAGGGCAAGTTGGTGTTAGGATACCCCTTCTTTTGTATTTGGTTGGAAAAAAGCGGCTGCTGCTTTCATTTTACTTCTGTAGTTCAGGTGAGAACTAAAATGGATAGAGGAAGCTTCCCATTATTTACTGCGGTTGTCTTGTTTAATTTA 1597 41.95 MRTLCDACESAAAIVFCAADEAALCRSCDEKVHMCNKLASRHVRVGLASPSDVPRCDICENAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHKRYLLLRQRVEFPGDKPINLDDPSPHSKVPNDIGKVHNQPPPHKVTAEDNQQNHHRLSPVREANDDGHAETDTNMVDLNMKPQRVHGQAANNQDL 186
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 58084418 58087864 - XM_039021080.1 Bhi01g02390 25163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g02390 186 CDD Bbox1_BBX-like 4 47 - -
Bhi01g02390 186 SUPERFAMILY B-box zinc-binding domain 48 88 - -
Bhi01g02390 186 MobiDBLite consensus disorder prediction 139 163 - -
Bhi01g02390 186 Gene3D Classic Zinc Finger 2 96 - -
Bhi01g02390 186 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 184 - -
Bhi01g02390 186 CDD Bbox1_BBX-like 56 96 - -
Bhi01g02390 186 Pfam B-box zinc finger 52 92 IPR000315 GO:0008270
Bhi01g02390 186 Pfam B-box zinc finger 3 42 IPR000315 GO:0008270
Bhi01g02390 186 MobiDBLite consensus disorder prediction 105 186 - -
Bhi01g02390 186 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bhi01g02390 186 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
Bhi01g02390 186 PANTHER B-BOX ZINC FINGER PROTEIN 19 1 184 - -
Bhi01g02390 186 SMART bboxneu5 51 96 IPR000315 GO:0008270
Bhi01g02390 186 SMART bboxneu5 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02390 Bhi-Chr1:58084418 Bhi03g00888 Bhi-Chr3:16612982 1.97E-73 dispersed
Bhi01g02390 Bhi-Chr1:58084418 Bhi03g00887 Bhi-Chr3:16612977 5.53E-64 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
231 PF00643 zf-B_box 2.40E-06 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g02390 - - csv:101208899 386.341