Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g02428 GAAAAGAAAATAAAGTAATCAATCATCTCTGCAAAACTGCAACAAAATCAGAGCACAGAGAAAGGGAAAGGCCTCAGAGAAAGACAGAGAGGAAGAACAAGAAGAAGAAATATGTGTGGATATAATACTTCTTTTGTTCTGTATTTAAGTTAGCACCGCCGTTCCCCATGGCGGCGTTGCAGACTTCAATTCTCACACACTGAAAATAAATAAATAAATAAATAGAAATTACCCTCTCAGAATCTGATTCCCAATTCAACCCTTTCTTTCTTTTTCTTTTCTTTTTCTTTCCTTTTTTTTTGTCTGAGTACGAAAATTTGATTAGGTGAAAAAGGAAATTCATACTGGCTTCCGATCATCGTTGAGAGGTTGTGTTTTTTTCTGATATGGATTTTGATTCAAAATCAGGAAGAATATGGCCGGTTTTTTCCCACTAGACGGCGGCGGAAGCAGCGGAAGAGGACCCAATTATCAATTTCCTACTACCACCACCACCACCACAACCGGCGGCGGCGAAATTATTCATCCGACCGACGGGTTATTTTGGTACAAGAATTACGAGAGGTTGGAAACATGGGAAGAACAACAGCAGCAGCAAGAACAAGGGGGAGAAGGGTTTGTTTACTCCGGCGATGAATCGCCGGCAAGATCGTCGTTAGTGATGGTGAGATCGGGGAGAGGCGGCAGCGGAGGGCAGGTAATGAGCTGCCAAGACTGCGGAAATCAAGCGAAAAAAGATTGCGTTCACATGCGATGTAGAACTTGTTGTAAAAGCCGTGGATTTGAGTGTGAAACTCACGTGAAAAGCACATGGGTTCCGGCTTCCAAACGCCGTGAACGCCACCTCCGTTGCGACGGCTCTAACCCCAAACGCCCCAAAGACGCCGCTTCTTCAGGGTTGGAAATGGGGATTTTTCCGGCGGAAGTGAGCTCAACGGCAGTGTTTCGGTGTGTACGAATGACAACGTTAGACGAAACCAGCGAACAATGTGCGTATCAAACAGCTGTCAATATCGGAGGCCATATTTTTAAAGGCATTCTTTACGACCACGGCCCTGAACAACCACCGACCTCCGCCTCCCCCAACGGCGGCGCCCTCCTCATCACCACCGCCGAATCCGCCACATTGCTCGATCCACCTCCGCCGTACCCGACTCCTCTCACCACCTATATCCCCGCCGGTACGCAATTTTTTCTTCCTCCAACATCTTAGCCGATTATGACATTGCCAATTAATAGGTGAAATTGAATTGAAGAAAAAAGAACAAAAAAAATTAAGAGAGTGAAGGAAGTTTAAGTTTGTGCCTAAGTATATAATTTTTTATGAATAAAATTTTCAGCTTGTAATTTTCCAATGAAGAGTTTGCATTAATTTGCCGCCATTGTTGGAATTTCGATGCTGCTTATTTTTA 1412 44.33 MAGFFPLDGGGSSGRGPNYQFPTTTTTTTTGGGEIIHPTDGLFWYKNYERLETWEEQQQQQEQGGEGFVYSGDESPARSSLVMVRSGRGGSGGQVMSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRERHLRCDGSNPKRPKDAASSGLEMGIFPAEVSSTAVFRCVRMTTLDETSEQCAYQTAVNIGGHIFKGILYDHGPEQPPTSASPNGGALLITTAESATLLDPPPPYPTPLTTYIPAGTQFFLPPTS 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 59065156 59066667 - XM_039025702.1 Bhi01g02428 25201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g02428 265 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 97 139 IPR006510 -
Bhi01g02428 265 Pfam Domain of unknown function (DUF702) 96 215 - -
Bhi01g02428 265 MobiDBLite consensus disorder prediction 1 36 - -
Bhi01g02428 265 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 261 IPR007818 GO:0003700|GO:0006355
Bhi01g02428 265 PANTHER PROTEIN SHORT INTERNODES 1 261 - -
Bhi01g02428 265 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 167 214 IPR006511 -
Bhi01g02428 265 MobiDBLite consensus disorder prediction 16 34 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02428 Bhi-Chr1:59065156 Bhi03g00899 Bhi-Chr3:16955402 1.26E-59 dispersed
Bhi01g02427 Bhi-Chr1:59065156 Bhi01g02428 Bhi-Chr1:59065156 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
235 PF05142 DUF702 4.40E-22 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g02428 - - bhj:120073083 508.449