Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g02444 CCTTTTTCTGTCAAAATCAAACCGCCTTTCCTCTTTGATTTAATTTCTCCTCTCTTCTTCTCCTTTAAATTCCCCACCACACACCCACTTTCCACCACCACAAATTTCCACCCGAATTCCCCTCCTCTCTCCGCTCCGCCTTCACTTTCCGGCCAACCCCTCTGCCATGAGCGGCCACAAACGAAACTTCACCACCACAGCCGCCGCCGCGGTCAGCCCCGTCGGCAGTCCCACCTCCGGCAACATCTCCGATAGCTCCACAAAAGAACAGGACAGGTTCCTCCCGATCGCAAACGTGAGCCGAATCATGAAAAAATCTCTTCCGGCGAACGCCAAAATCTCAAAAGAAGCGAAAGAGACCGTCCAGGAATGTGTGTCGGAGTTCATCAGCTTCATCACCGGCGAAGCCTCCGACAAGTGCCAAAGGGAAAAACGAAAGACGATCAACGGAGACGATTTGCTGTGGGCGATGACTACTTTGGGATTCGAAAATTACGTCGGCCCTTTGAAGATGTATCTCAACAAATACAGAGAAACAGAGGAAGAGAAACATTCTTTAGCTAGACAGGACGATCCCTCCCTGTCTCCGGCGAAATCCGCCGCCGAACAGATTATTAGTGGGAAATCGGCGAATTCGGTGATGGATTTTCAGAATTTCAATTCTGGGTTTTATTCATTGGGGAATCAAAATCAAAATCAGGGGAATCAGAAGAGTTTCAATATAATCGATGGCGTTGGATTTGGTGAAAGTTTGAGGGGTTTCAATATTAATGGAGTCCATGAAAATGGAGAAGGGAATCGAGCTCGAGCTATGGCGGCTCATCTTCAACAGAGCTCTGGTTGGTGATTTCAATGGTTGAATTATAAATTTAATCTAGAAATTTAGAATTAAGTCCTTACGTATTAAAATTACAATTTCATATCGATAGAACTTTGATTTGGTTAAAATTTTCATAAAATAAAGTTTTAAATTCTAAATTTCAAACTATACTAGGTAAATTCCAATTTTTTCTAGACCAAAATTATAATTTTAACTCATAAACACGAACTACAGAAAGAGAGGGGAAAAAATCGAGATTTTCTGATGCTATTCAAGGTTTTTTTTTTTTTTTTTTTTCTTTTTTGGGTCGAATTTCGATGTCATTTTTAGATTAAATTAAGGAGATTTTATCATTATAGTCTTAATACATTTTTATGTAGGGTTTTATGAGTTAGTTTATGGGCTTTAGAAGGGA 1235 40.73 MSGHKRNFTTTAAAAVSPVGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKMYLNKYRETEEEKHSLARQDDPSLSPAKSAAEQIISGKSANSVMDFQNFNSGFYSLGNQNQNQGNQKSFNIIDGVGFGESLRGFNINGVHENGEGNRARAMAAHLQQSSGW 226
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 60200847 60202081 - XM_039042220.1 Bhi01g02444 25217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g02444 226 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 38 102 IPR003958 -
Bhi01g02444 226 Coils Coil 114 134 - -
Bhi01g02444 226 PRINTS CCAAT-binding transcription factor subunit A signature 66 84 - -
Bhi01g02444 226 PRINTS CCAAT-binding transcription factor subunit A signature 85 103 - -
Bhi01g02444 226 PRINTS CCAAT-binding transcription factor subunit A signature 104 122 - -
Bhi01g02444 226 Gene3D Histone, subunit A 25 160 IPR009072 GO:0046982
Bhi01g02444 226 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-11 20 185 - -
Bhi01g02444 226 SUPERFAMILY Histone-fold 35 137 IPR009072 GO:0046982
Bhi01g02444 226 MobiDBLite consensus disorder prediction 1 34 - -
Bhi01g02444 226 ProSitePatterns NF-YB/HAP3 subunit signature. 69 85 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bhi01g02444 226 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 20 185 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02444 Bhi-Chr1:60200847 Bhi10g01300 Bhi-Chr10:30789337 1.14E-62 dispersed
Bhi01g02444 Bhi-Chr1:60200847 Bhi11g02146 Bhi-Chr11:60103939 5.71E-59 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
238 PF00808 CBFD_NFYB_HMF 6.80E-27 CL0012 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g02444 K08065 - csv:116406241 409.068