Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi01g02444 | CCTTTTTCTGTCAAAATCAAACCGCCTTTCCTCTTTGATTTAATTTCTCCTCTCTTCTTCTCCTTTAAATTCCCCACCACACACCCACTTTCCACCACCACAAATTTCCACCCGAATTCCCCTCCTCTCTCCGCTCCGCCTTCACTTTCCGGCCAACCCCTCTGCCATGAGCGGCCACAAACGAAACTTCACCACCACAGCCGCCGCCGCGGTCAGCCCCGTCGGCAGTCCCACCTCCGGCAACATCTCCGATAGCTCCACAAAAGAACAGGACAGGTTCCTCCCGATCGCAAACGTGAGCCGAATCATGAAAAAATCTCTTCCGGCGAACGCCAAAATCTCAAAAGAAGCGAAAGAGACCGTCCAGGAATGTGTGTCGGAGTTCATCAGCTTCATCACCGGCGAAGCCTCCGACAAGTGCCAAAGGGAAAAACGAAAGACGATCAACGGAGACGATTTGCTGTGGGCGATGACTACTTTGGGATTCGAAAATTACGTCGGCCCTTTGAAGATGTATCTCAACAAATACAGAGAAACAGAGGAAGAGAAACATTCTTTAGCTAGACAGGACGATCCCTCCCTGTCTCCGGCGAAATCCGCCGCCGAACAGATTATTAGTGGGAAATCGGCGAATTCGGTGATGGATTTTCAGAATTTCAATTCTGGGTTTTATTCATTGGGGAATCAAAATCAAAATCAGGGGAATCAGAAGAGTTTCAATATAATCGATGGCGTTGGATTTGGTGAAAGTTTGAGGGGTTTCAATATTAATGGAGTCCATGAAAATGGAGAAGGGAATCGAGCTCGAGCTATGGCGGCTCATCTTCAACAGAGCTCTGGTTGGTGATTTCAATGGTTGAATTATAAATTTAATCTAGAAATTTAGAATTAAGTCCTTACGTATTAAAATTACAATTTCATATCGATAGAACTTTGATTTGGTTAAAATTTTCATAAAATAAAGTTTTAAATTCTAAATTTCAAACTATACTAGGTAAATTCCAATTTTTTCTAGACCAAAATTATAATTTTAACTCATAAACACGAACTACAGAAAGAGAGGGGAAAAAATCGAGATTTTCTGATGCTATTCAAGGTTTTTTTTTTTTTTTTTTTTCTTTTTTGGGTCGAATTTCGATGTCATTTTTAGATTAAATTAAGGAGATTTTATCATTATAGTCTTAATACATTTTTATGTAGGGTTTTATGAGTTAGTTTATGGGCTTTAGAAGGGA | 1235 | 40.73 | MSGHKRNFTTTAAAAVSPVGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKMYLNKYRETEEEKHSLARQDDPSLSPAKSAAEQIISGKSANSVMDFQNFNSGFYSLGNQNQNQGNQKSFNIIDGVGFGESLRGFNINGVHENGEGNRARAMAAHLQQSSGW | 226 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 60200847 | 60202081 | - | XM_039042220.1 | Bhi01g02444 | 25217 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi01g02444 | 226 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 38 | 102 | IPR003958 | - | |
Bhi01g02444 | 226 | Coils | Coil | 114 | 134 | - | - | |
Bhi01g02444 | 226 | PRINTS | CCAAT-binding transcription factor subunit A signature | 66 | 84 | - | - | |
Bhi01g02444 | 226 | PRINTS | CCAAT-binding transcription factor subunit A signature | 85 | 103 | - | - | |
Bhi01g02444 | 226 | PRINTS | CCAAT-binding transcription factor subunit A signature | 104 | 122 | - | - | |
Bhi01g02444 | 226 | Gene3D | Histone, subunit A | 25 | 160 | IPR009072 | GO:0046982 | |
Bhi01g02444 | 226 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-11 | 20 | 185 | - | - | |
Bhi01g02444 | 226 | SUPERFAMILY | Histone-fold | 35 | 137 | IPR009072 | GO:0046982 | |
Bhi01g02444 | 226 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Bhi01g02444 | 226 | ProSitePatterns | NF-YB/HAP3 subunit signature. | 69 | 85 | IPR003956 | GO:0005634|GO:0006355|GO:0043565 | |
Bhi01g02444 | 226 | PANTHER | CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED | 20 | 185 | IPR027113 | GO:0001228|GO:0006355|GO:0016602 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi01g02444 | Bhi-Chr1:60200847 | Bhi10g01300 | Bhi-Chr10:30789337 | 1.14E-62 | dispersed | |
Bhi01g02444 | Bhi-Chr1:60200847 | Bhi11g02146 | Bhi-Chr11:60103939 | 5.71E-59 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
238 | PF00808 | CBFD_NFYB_HMF | 6.80E-27 | CL0012 | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi01g02444 | K08065 | - | csv:116406241 | 409.068 |