Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g02449 AAGAGAGAGAAAAGACAAAAAAACCAAAAGGAGAGAGAAAAACAAAAGAAGGGTACAAAAATATAATTGAAAAAAAAAACAGCGAGAAAAGGAAGACAAAAAGGGCAGGGAAAAAAAAAAAGAAAAGAGGGCAGTTAATTAAGATGGTGGGAACAAGAAATAGAAGCTAATTTGATCCAAAGAAGAAAGCAACTGACTTTGAAGGCCCTTTTTTTTCCTCTCTTGGGGGATGTTTATGTTTGAGCTCACTAATTATCCAAAATACACTGCTTTTCCAATCCAAATTTCTTCTTCTTCTATTCCAGGAAGGATGGGATTGTATGAACCTATCCACCATATTGGAATGTGGGGAGAAACTTTTAGAACCAATGCCAATTTAGATCCACCATCCTCCTTTATTATTGAAGCTGATACCAAGCTAGAAAATCAGTCCGATGATGCTTCTCTCGGCTCACTTGGAGATCCACATGTATTTGATCAAGATGATACCAAACGCATTGATAAGATTCAAAGACGCCTGGCACAAAATCGGGAAGCAGCTCGCAAAAGTCGCTTGCGGAAAAAGGCTTATATTAAGCAATTGGAAACAAGCCGCTTAAAACTCATTCAATTGGAGCAAGAGCTTGAAAAGGCAAGACAACAAGGTCTCTTGGCTGGATCCCGATTTGATAATAACCAGTTGGGTTTATCAGGAACCACAAATTCAGGCATCTCTGCATTTGAATCAGAGTATGAGCAATGGGTGGAGGAGCAGAACAGGCAGATTTGCGATCTGAGGACTGCTGTGCATGCCGATATTACTGATATCGAGCTTCGAATACTCGTAGAAAATGCAATGAGACACTACTTTAAATTTTTTCGCATGAAAGCTAAAGCTGCAAAAGCCGATGTCTCTTACATAATGTCAGGCATGTGGAAAACATCAGCCGAAAGACTTTTCTTATGGATAGGAGGATTTCGCCCTTCAGAACTTCTCAAGGTTTTGATACCTCAACTGGAGACATTAACTGAACAACAAATTTCGGAAACTGGTAGCCTTAGGAAATCTTGTCTACAAGCAGAAGATGCTCTTAGACAAGGTATGGAAAAACTACAACAAAATCTATTTGATAGCGTAGTGGCTGGTCAGCTGGGAGAAGGAAGTCATCCTCTACAAATGACTGCTGCAATGGAGAGATTAGAAGCGCTCATTAGCTTTGTGAATCAGGCTGACCATCTACGANCAGAAACATTGCAACAGATGACAAAAATTCTAACGACTCGACAATCTGCTCAAGGCCTTCTTACTCTCGGGGAGTTTTTCCAACGACTCCGAGCATTGAGCTCGCTTTGGGACTAATCGTCCTTGTGAGCCTGCATAGTTCATTATCAAACATTTGTCAACCTCAAAGTTGCTTCATGATTATCCCAAGGATCTACAGGCGTTTTGGTAATGTATTGGTAAAAACATTTATGAAACAGGGATGCAAAGCTATACCATTTTGCAAGCGTCCTACACCTAAGTACTACACCGCCCGTTTGTTAAATATCGAGATTCTTATCGAGAGAAATTGCAAGTATGATTGATTTTTTGAAATCTGTTGTATTGCCAAGTTGTCTTCAATATAATCTATTTAATGTCAATATAATCAATCTTCAGGATGAACATTTTTGTGATGACA 1661 39.31 MFMFELTNYPKYTAFPIQISSSSIPGRMGLYEPIHHIGMWGETFRTNANLDPPSSFIIEADTKLENQSDDASLGSLGDPHVFDQDDTKRIDKIQRRLAQNREAARKSRLRKKAYIKQLETSRLKLIQLEQELEKARQQGLLAGSRFDNNQLGLSGTTNSGISAFESEYEQWVEEQNRQICDLRTAVHADITDIELRILVENAMRHYFKFFRMKAKAAKADVSYIMSGMWKTSAERLFLWIGGFRPSELLKVLIPQLETLTEQQISETGSLRKSCLQAEDALRQGMEKLQQNLFDSVVAGQLGEGSHPLQMTAAMERLEALISFVNQADHLRXETLQQMTKILTTRQSAQGLLTLGEFFQRLRALSSLWD 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 60375749 60383832 - XM_039022163.1 Bhi01g02449 25222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g02449 369 Pfam bZIP transcription factor 91 126 IPR004827 GO:0003700|GO:0006355
Bhi01g02449 369 PANTHER TRANSCRIPTION FACTOR TGA1 25 368 - -
Bhi01g02449 369 Coils Coil 111 138 - -
Bhi01g02449 369 ProSiteProfiles DOG1 domain profile. 161 369 IPR025422 GO:0006351|GO:0043565
Bhi01g02449 369 Pfam Seed dormancy control 178 253 IPR025422 GO:0006351|GO:0043565
Bhi01g02449 369 PANTHER TRANSCRIPTION FACTOR TGA9 25 368 - -
Bhi01g02449 369 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 95 110 IPR004827 GO:0003700|GO:0006355
Bhi01g02449 369 SMART brlzneu 88 150 IPR004827 GO:0003700|GO:0006355
Bhi01g02449 369 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 90 134 IPR004827 GO:0003700|GO:0006355
Bhi01g02449 369 SUPERFAMILY Leucine zipper domain 93 134 IPR046347 GO:0003700|GO:0006355
Bhi01g02449 369 Gene3D - 91 141 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02449 Bhi-Chr1:60375749 Bhi04g02508 Bhi-Chr4:67789684 7.81E-130 dispersed
Bhi08g02184 Bhi-Chr8:62205265 Bhi01g02449 Bhi-Chr1:60375749 2.45E-08 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
240 PF14144 DOG1 1.90E-28 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g02449 K14431 - csv:101208419 645.195