Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi01g02573 | CAAAGCTGTTATATTTATATTTCCAAAAAAAGAAGAATAAAAAAAATGTTTCAAGGGTTTGTTTTTGGCATTAATGACGTGTACGGTCACGAATTCTCCGCCGTGTCTGTGCCGGAAATCGACGACACGGCGATGTTCAGCTCCGACGAGTTTCGAATGTACGCTTACAAGATCCAACGGTGTCCAAGAAACCGCAGCCACGATTGGACGGAATGTCCGTACGCCCACCGCGGCGAGAAGGCTCAACGCCGTGACCCACGGCGGTTCAATTACACTGCTGTGGCCTGCCCAGCTTTTCGGTCGGGCAGCTGCCCGAAGGGCGATTTTTGTGAATTTGCTCATGGGGTTTTTGAGTACTGGCTTCACCCAGCCCGGTACCGGACCCGGGCCTGTAATGCGGGCCGGTTTTGTCAACGCAAAGTTTGTTTTTTTGCTCACTCGCCGAAGGAGCTCCGGCCAGAGACCAAACAGAAGTTTAATTTTAATGCTCACCGGCAGCGTGTGGCGGTGGCTGACGTTGAAAGTCCGTCAGAGGAAAAATTTGACGGCGCTTCGGAAATTCCGGTGAGGGGAACCAGCGGTGGACGGGAAAAACAACGGAGTTTTGGGTTGGAGGTATCGGAATTGGACTTGCCGCATGTTGAATGGATATCGGAATTGTTGCAGTAAATTAAATTTTAAAAAAATACT | 690 | 49.86 | MFQGFVFGINDVYGHEFSAVSVPEIDDTAMFSSDEFRMYAYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPKELRPETKQKFNFNAHRQRVAVADVESPSEEKFDGASEIPVRGTSGGREKQRSFGLEVSELDLPHVEWISELLQ | 207 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 63225403 | 63226092 | + | XM_039022203.1 | Bhi01g02573 | 25346 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi01g02573 | 207 | ProSiteProfiles | Zinc finger C3H1-type profile. | 75 | 102 | IPR000571 | GO:0046872 | |
Bhi01g02573 | 207 | MobiDBLite | consensus disorder prediction | 157 | 186 | - | - | |
Bhi01g02573 | 207 | PANTHER | UNKEMPT FAMILY MEMBER | 25 | 160 | IPR045234 | - | |
Bhi01g02573 | 207 | PANTHER | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 54 | 25 | 160 | - | - | |
Bhi01g02573 | 207 | SUPERFAMILY | CCCH zinc finger | 74 | 105 | IPR036855 | GO:0046872 | |
Bhi01g02573 | 207 | SMART | c3hfinal6 | 110 | 133 | IPR000571 | GO:0046872 | |
Bhi01g02573 | 207 | SMART | c3hfinal6 | 75 | 101 | IPR000571 | GO:0046872 | |
Bhi01g02573 | 207 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 80 | 100 | IPR000571 | GO:0046872 | |
Bhi01g02573 | 207 | Gene3D | - | 75 | 139 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi01g02573 | Bhi-Chr1:63225403 | Bhi11g02699 | Bhi-Chr11:72342791 | 3.43E-50 | dispersed | |
Bhi01g02573 | Bhi-Chr1:63225403 | Bhi07g00550 | Bhi-Chr7:22592783 | 5.19E-51 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
249 | PF00642 | zf-CCCH | 1.10E-05 | CL0537 | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi01g02573 | - | - | mcha:111011570 | 310.457 |