Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g02573 CAAAGCTGTTATATTTATATTTCCAAAAAAAGAAGAATAAAAAAAATGTTTCAAGGGTTTGTTTTTGGCATTAATGACGTGTACGGTCACGAATTCTCCGCCGTGTCTGTGCCGGAAATCGACGACACGGCGATGTTCAGCTCCGACGAGTTTCGAATGTACGCTTACAAGATCCAACGGTGTCCAAGAAACCGCAGCCACGATTGGACGGAATGTCCGTACGCCCACCGCGGCGAGAAGGCTCAACGCCGTGACCCACGGCGGTTCAATTACACTGCTGTGGCCTGCCCAGCTTTTCGGTCGGGCAGCTGCCCGAAGGGCGATTTTTGTGAATTTGCTCATGGGGTTTTTGAGTACTGGCTTCACCCAGCCCGGTACCGGACCCGGGCCTGTAATGCGGGCCGGTTTTGTCAACGCAAAGTTTGTTTTTTTGCTCACTCGCCGAAGGAGCTCCGGCCAGAGACCAAACAGAAGTTTAATTTTAATGCTCACCGGCAGCGTGTGGCGGTGGCTGACGTTGAAAGTCCGTCAGAGGAAAAATTTGACGGCGCTTCGGAAATTCCGGTGAGGGGAACCAGCGGTGGACGGGAAAAACAACGGAGTTTTGGGTTGGAGGTATCGGAATTGGACTTGCCGCATGTTGAATGGATATCGGAATTGTTGCAGTAAATTAAATTTTAAAAAAATACT 690 49.86 MFQGFVFGINDVYGHEFSAVSVPEIDDTAMFSSDEFRMYAYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPKELRPETKQKFNFNAHRQRVAVADVESPSEEKFDGASEIPVRGTSGGREKQRSFGLEVSELDLPHVEWISELLQ 207
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 63225403 63226092 + XM_039022203.1 Bhi01g02573 25346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g02573 207 ProSiteProfiles Zinc finger C3H1-type profile. 75 102 IPR000571 GO:0046872
Bhi01g02573 207 MobiDBLite consensus disorder prediction 157 186 - -
Bhi01g02573 207 PANTHER UNKEMPT FAMILY MEMBER 25 160 IPR045234 -
Bhi01g02573 207 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 54 25 160 - -
Bhi01g02573 207 SUPERFAMILY CCCH zinc finger 74 105 IPR036855 GO:0046872
Bhi01g02573 207 SMART c3hfinal6 110 133 IPR000571 GO:0046872
Bhi01g02573 207 SMART c3hfinal6 75 101 IPR000571 GO:0046872
Bhi01g02573 207 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 80 100 IPR000571 GO:0046872
Bhi01g02573 207 Gene3D - 75 139 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02573 Bhi-Chr1:63225403 Bhi11g02699 Bhi-Chr11:72342791 3.43E-50 dispersed
Bhi01g02573 Bhi-Chr1:63225403 Bhi07g00550 Bhi-Chr7:22592783 5.19E-51 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
249 PF00642 zf-CCCH 1.10E-05 CL0537 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g02573 - - mcha:111011570 310.457